Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_028_C24
(613 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O08719|EVL_RAT Ena/vasodilator-stimulated phosphoprotein... 45 1e-04
sp|P70429|EVL_MOUSE Ena/vasodilator-stimulated phosphoprote... 45 2e-04
sp|Q9UI08|EVL_HUMAN Ena/vasodilator-stimulated phosphoprote... 44 2e-04
sp|Q9NJG9|SUZ12_DROME Polycomb protein Su(z)12 (Suppressor ... 39 0.010
sp|P50552|VASP_HUMAN Vasodilator-stimulated phosphoprotein ... 39 0.014
sp|O77459|KEN_DROME Probable transcription factor Ken (Ken ... 36 0.068
sp|P51612|XPC_MOUSE DNA-repair protein complementing XP-C c... 35 0.12
sp|P32583|SRP40_YEAST Suppressor protein SRP40 35 0.15
sp|P22810|HMOC_DROME Homeotic protein ocelliless (Orthodent... 35 0.20
sp|P74934|ENO_TREPA Enolase (2-phosphoglycerate dehydratase... 34 0.26
>sp|O08719|EVL_RAT Ena/vasodilator-stimulated phosphoprotein-like protein
(Ena/VASP-like protein)
Length = 393
Score = 45.1 bits (105), Expect = 1e-04
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Frame = +3
Query: 159 EESNQSGLASQLRQAKLKSRGGPVEPDVSSNQNKNVTSSATLGRA----GGDSMMSEMQR 326
+ES+ SGLA+ L AKL+ P D S + + TS + RA GG +M EM +
Sbjct: 214 DESSASGLAAALAGAKLRRVQRP--EDASGGSSPSGTSKSDANRASSGGGGGGLMEEMNK 271
Query: 327 VLAARKK-AKEVVKPTGSECTDNGGSGDNSSKNPQWR---QNHHRSQSDCDQTNGTNNQS 494
+LA R+K A + KP + +N ++S +P R Q + S++ +N+
Sbjct: 272 LLAKRRKAASQTDKPADRKEDENQTEDPSTSPSPGSRATSQPPNSSEAGRKPWERSNSVE 331
Query: 495 KPAA 506
KP +
Sbjct: 332 KPVS 335
>sp|P70429|EVL_MOUSE Ena/vasodilator-stimulated phosphoprotein-like protein
(Ena/VASP-like protein)
Length = 414
Score = 44.7 bits (104), Expect = 2e-04
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Frame = +3
Query: 159 EESNQSGLASQLRQAKLKSRGGPVEPDVSSNQNKNVTSSATLGRA----GGDSMMSEMQR 326
+ES+ SGLA+ L AKL+ P D S + + TS + RA GG +M EM +
Sbjct: 214 DESSASGLAAALAGAKLRRVQRP--EDASGGSSPSGTSKSDANRASSGGGGGGLMEEMNK 271
Query: 327 VLAARKK-AKEVVKPTGSECTDNGGSGDNSSKNPQWR---QNHHRSQSDCDQTNGTNNQS 494
+LA R+K A + KP + ++ ++S +P R Q + S++ +N+
Sbjct: 272 LLAKRRKAASQTDKPADRKEDESQTEDPSTSPSPGTRATSQPPNSSEAGRKPWERSNSVE 331
Query: 495 KPAADAAKSTSMQCATLGRRGSLQPDSQQPVSSI 596
KP + T + + LQ QP S +
Sbjct: 332 KPVSSLLSRTPSVAKSPEAKSPLQ---SQPHSRV 362
>sp|Q9UI08|EVL_HUMAN Ena/vasodilator-stimulated phosphoprotein-like protein
(Ena/VASP-like protein)
Length = 416
Score = 44.3 bits (103), Expect = 2e-04
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Frame = +3
Query: 153 SDEESNQSGLASQLRQAKLKSRGGPVEPDVSSNQNKNVTSSATLGRA----GGDSMMSEM 320
S +ES+ SGLA+ + AKL+ P D S + + TS + RA GG +M EM
Sbjct: 214 SHDESSMSGLAAAIAGAKLRRVQRP--EDASGGSSPSGTSKSDANRASSGGGGGGLMEEM 271
Query: 321 QRVLAARKK-AKEVVKPTGSECTDNGGSGDNSSKNPQWR---QNHHRSQSDCDQTNGTNN 488
++LA R+K A + KP + ++ ++S +P R Q + S++ +N+
Sbjct: 272 NKLLAKRRKAASQSDKPAEKKEDESQMEDPSTSPSPGTRAASQPPNSSEAGRKPWERSNS 331
Query: 489 QSKPAADAAKSTSMQCATLGRRGSL--QPDSQ-QPVSSI 596
KP + T + + L QP S+ +P S+
Sbjct: 332 VEKPVSSILSRTPSVAKSPEAKSPLQSQPHSRMKPAGSV 370
>sp|Q9NJG9|SUZ12_DROME Polycomb protein Su(z)12 (Suppressor 12 of zeste protein)
Length = 900
Score = 38.9 bits (89), Expect = 0.010
Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 1/139 (0%)
Frame = +3
Query: 144 NNDSDEESNQSGLASQLRQAKLKSRGGPVEPDVSSNQNKNVTSSATLGR-AGGDSMMSEM 320
N + SN +A + L + E Q +NV+ S A + S+
Sbjct: 746 NGSNSSSSNSKNVAKKSADQPLSTLANTRERRSEYGQKRNVSGSRLAATPASKRKLSSKD 805
Query: 321 QRVLAARKKAKEVVKPTGSECTDNGGSGDNSSKNPQWRQNHHRSQSDCDQTNGTNNQSKP 500
VL R++ + TG GGSG +++N + N+H + + + +++ SK
Sbjct: 806 NTVLNKRQRYSDGSPGTGIGNGHGGGSGSGANRN---KSNNHSLPATSNNASSSSSNSKR 862
Query: 501 AADAAKSTSMQCATLGRRG 557
A +STS + G G
Sbjct: 863 AIARRRSTSERTKASGSTG 881
Score = 33.5 bits (75), Expect = 0.44
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 195 RQAKLKSRGGPVEPDVSSNQNKNVTSSATLGRAGGDSMMSEMQRVLAARKKAKEVVKP-T 371
+Q K+ P +P ++Q + +S++T G G S M +R+ A K+ P
Sbjct: 678 KQEDPKTLKSPQKPAPPADQ-ASTSSASTSGSGSGSSSMQPPKRMPAHLKRGSAASSPGV 736
Query: 372 GSECTDNGGSGDNSSKN 422
S+ T+NG +G NSS +
Sbjct: 737 QSKGTENGTNGSNSSSS 753
>sp|P50552|VASP_HUMAN Vasodilator-stimulated phosphoprotein (VASP)
Length = 380
Score = 38.5 bits (88), Expect = 0.014
Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 13/130 (10%)
Frame = +3
Query: 177 GLASQLRQAKLK-------SRGGPVEPDVSSNQNKNVTSSATLGRAGGDSMMSEMQRVLA 335
GLA+ + AKL+ + GGP P S GR+GG +M EM +LA
Sbjct: 225 GLAAAIAGAKLRKVSKQEEASGGPTAPKAES------------GRSGGGGLMEEMNAMLA 272
Query: 336 ARKKAKEVVKPTGSECTDNGGS------GDNSSKNPQWRQNHHRSQSDCDQTNGTNNQSK 497
R+KA +V + T + + N + S W +N ++ T ++++
Sbjct: 273 RRRKATQVGEKTPKDESANQEEPEARVPAQSESVRRPWEKNSTTLPRMKSSSSVTTSETQ 332
Query: 498 PAADAAKSTS 527
P ++ S
Sbjct: 333 PCTPSSSDYS 342
>sp|O77459|KEN_DROME Probable transcription factor Ken (Ken and Barbie protein)
Length = 601
Score = 36.2 bits (82), Expect = 0.068
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Frame = +3
Query: 249 NQNKNVTSSATLGRAGGDSMMSEMQRVLAAR-----KKAKEVVKPTGSECTDNGGSGDN- 410
N N N S+A R+GG + E + + K E+V + + + GS N
Sbjct: 180 NSNDNCESAAECERSGGHNNKEEDEDDCTHKDNKSDKDTDEIVNLSNAPPSGTSGSNSNI 239
Query: 411 -SSKNPQWRQNHHRSQSDCDQTNGTNNQSKPAA 506
+S N Q +Q+HH + + N NN + ++
Sbjct: 240 STSSNHQQQQHHHHHHHNHNNNNNNNNNNSSSS 272
>sp|P51612|XPC_MOUSE DNA-repair protein complementing XP-C cells homolog (Xeroderma
pigmentosum group C complementing protein homolog)
(p125)
Length = 930
Score = 35.4 bits (80), Expect = 0.12
Identities = 36/155 (23%), Positives = 60/155 (38%)
Frame = +3
Query: 129 KPFQQNNDSDEESNQSGLASQLRQAKLKSRGGPVEPDVSSNQNKNVTSSATLGRAGGDSM 308
KP +EE+ G + K +RG S Q + + S G+
Sbjct: 355 KPTTSRRIKEEETLSEG------RGKATARGKRGTGTAGSRQRRKPSCSE------GEEA 402
Query: 309 MSEMQRVLAARKKAKEVVKPTGSECTDNGGSGDNSSKNPQWRQNHHRSQSDCDQTNGTNN 488
++Q ARK+ + K + E +++ G+G S P + H S DC+ G
Sbjct: 403 EQKVQGRPHARKR-RVAAKVSYKEESESDGAGSGSDFEPSSGEGQHSSDEDCEP--GPRK 459
Query: 489 QSKPAADAAKSTSMQCATLGRRGSLQPDSQQPVSS 593
Q + +A + A+ +RGS S P +S
Sbjct: 460 QKRASAPQRTKAGSKSASKTQRGSQCEPSSFPEAS 494
>sp|P32583|SRP40_YEAST Suppressor protein SRP40
Length = 406
Score = 35.0 bits (79), Expect = 0.15
Identities = 26/140 (18%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
Frame = +3
Query: 111 STITMAKPFQQNNDSDEESNQSGLASQLRQ-AKLKSRGGPVEPDVSSNQNKNVTSSATLG 287
S+ + + + +++SD +S+ S +S + S + D SS+ + + + S +
Sbjct: 179 SSSSSSSDSESDSESDSQSSSSSSSSDSSSDSDSSSSDSSSDSDSSSSSSSSSSDSDSDS 238
Query: 288 RAGGDSMMSEMQRVLAARKKAKEVVKPTGSECTDNGGSGDNSSKNPQWRQNHHRSQSDCD 467
+ DS S ++ + + + T S+ +D+ D+ S + + +S +
Sbjct: 239 DSSSDSDSSGSSDSSSSSDSSSD--ESTSSDSSDSDSDSDSGSSSELETKEATADESKAE 296
Query: 468 QTNGTNNQSKPAADAAKSTS 527
+T ++N+S P+A ++ S +
Sbjct: 297 ETPASSNESTPSASSSSSAN 316
>sp|P22810|HMOC_DROME Homeotic protein ocelliless (Orthodenticle protein)
Length = 671
Score = 34.7 bits (78), Expect = 0.20
Identities = 26/114 (22%), Positives = 42/114 (36%)
Frame = +3
Query: 198 QAKLKSRGGPVEPDVSSNQNKNVTSSATLGRAGGDSMMSEMQRVLAARKKAKEVVKPTGS 377
Q K+R + Q N SS+ GG +A ++ + S
Sbjct: 118 QVWFKNRRAKCRQQLQQQQQSNSLSSSKNASGGGSGNSCSSS---SANSRSNSNNNGSSS 174
Query: 378 ECTDNGGSGDNSSKNPQWRQNHHRSQSDCDQTNGTNNQSKPAADAAKSTSMQCA 539
G+NS+K+ Q + N SQ + G N+ + AA AA + + A
Sbjct: 175 NNNTQSSGGNNSNKSSQKQGNSQSSQQGGGSSGGNNSNNNSAAAAASAAAAVAA 228
>sp|P74934|ENO_TREPA Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate
hydro-lyase)
Length = 432
Score = 34.3 bits (77), Expect = 0.26
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Frame = +3
Query: 207 LKSRGGP-VEPDVSSNQNKNVTSSATLGRAGGDSMMSEMQRVLAARKKAKEVVKPTGSEC 383
+ SRG P VE DVS + + G + G+ EM+ R K V+K G+
Sbjct: 13 IDSRGNPTVEVDVSLSDGSFGRACVPSGASTGEFEALEMRDGDKERYNGKGVLKAVGTVN 72
Query: 384 TDNGGSGDNSSKNPQWRQNHHRSQSDCDQTNGTNNQSKPAADAAKSTSMQCA 539
T + + Q +H D GT+N+SK A+A SM CA
Sbjct: 73 TLIADTLEGMDALNQGEIDHAMRNLD-----GTDNKSKLGANAMLGVSMACA 119
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,303,207
Number of Sequences: 369166
Number of extensions: 1255050
Number of successful extensions: 4168
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4133
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4797864890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)