Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_028_C12
(143 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammon... 93 2e-19
sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammon... 92 3e-19
sp|Q4R7U3|GLNA_MACFA Glutamine synthetase (Glutamate--ammon... 92 3e-19
sp|P51121|GLNA_XENLA Glutamine synthetase (Glutamate--ammon... 91 6e-19
sp|P46410|GLNA_PIG Glutamine synthetase (Glutamate--ammonia... 91 6e-19
sp|P09606|GLNA_RAT Glutamine synthetase (Glutamate--ammonia... 91 8e-19
sp|P20478|GLNA2_DROME Glutamine synthetase 2, cytoplasmic (... 91 1e-18
sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammon... 91 1e-18
sp|P15105|GLNA_MOUSE Glutamine synthetase (Glutamate--ammon... 91 1e-18
sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammon... 90 1e-18
>sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 92.8 bits (229), Expect = 2e-19
Identities = 39/46 (84%), Positives = 45/46 (97%)
Frame = +1
Query: 1 ACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHR 138
ACL+AGIKIAGTNAEVMPAQWEFQIGPCEGI++ DHLW+AR++LHR
Sbjct: 182 ACLYAGIKIAGTNAEVMPAQWEFQIGPCEGIDMGDHLWVARFILHR 227
>sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 92.4 bits (228), Expect = 3e-19
Identities = 38/46 (82%), Positives = 45/46 (97%)
Frame = +1
Query: 1 ACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHR 138
ACL+AG+KIAGTNAEVMPAQWEFQIGPCEGI++ DHLW+AR++LHR
Sbjct: 182 ACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHR 227
>sp|Q4R7U3|GLNA_MACFA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 374
Score = 92.4 bits (228), Expect = 3e-19
Identities = 38/46 (82%), Positives = 45/46 (97%)
Frame = +1
Query: 1 ACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHR 138
ACL+AG+KIAGTNAEVMPAQWEFQIGPCEGI++ DHLW+AR++LHR
Sbjct: 183 ACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHR 228
>sp|P51121|GLNA_XENLA Glutamine synthetase (Glutamate--ammonia ligase)
Length = 392
Score = 91.3 bits (225), Expect = 6e-19
Identities = 37/46 (80%), Positives = 44/46 (95%)
Frame = +1
Query: 1 ACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHR 138
ACL+AGIKI GTNAEVMP+QWEFQ+GPCEGI++ DHLWMAR++LHR
Sbjct: 182 ACLYAGIKICGTNAEVMPSQWEFQVGPCEGIDMGDHLWMARFILHR 227
>sp|P46410|GLNA_PIG Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 91.3 bits (225), Expect = 6e-19
Identities = 38/46 (82%), Positives = 44/46 (95%)
Frame = +1
Query: 1 ACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHR 138
ACL+AGIKI GTNAEVMPAQWEFQIGPCEGI++ DHLW+AR++LHR
Sbjct: 182 ACLYAGIKIGGTNAEVMPAQWEFQIGPCEGIDMGDHLWVARFILHR 227
>sp|P09606|GLNA_RAT Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 90.9 bits (224), Expect = 8e-19
Identities = 38/46 (82%), Positives = 43/46 (93%)
Frame = +1
Query: 1 ACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHR 138
ACL+AGIKI GTNAEVMPAQWEFQIGPCEGI + DHLW+AR++LHR
Sbjct: 182 ACLYAGIKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWVARFILHR 227
>sp|P20478|GLNA2_DROME Glutamine synthetase 2, cytoplasmic (Glutamate--ammonia ligase 2)
Length = 369
Score = 90.5 bits (223), Expect = 1e-18
Identities = 37/46 (80%), Positives = 44/46 (95%)
Frame = +1
Query: 1 ACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHR 138
ACL+AGIK++GTNAEVMPAQWEFQ+GPCEGI++ D LWMAR+LLHR
Sbjct: 188 ACLYAGIKVSGTNAEVMPAQWEFQVGPCEGISIGDDLWMARFLLHR 233
>sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 90.5 bits (223), Expect = 1e-18
Identities = 37/46 (80%), Positives = 43/46 (93%)
Frame = +1
Query: 1 ACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHR 138
ACL+AG+KI GTNAEVMPAQWEFQIGPCEGI + DHLW+AR++LHR
Sbjct: 182 ACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWVARFILHR 227
>sp|P15105|GLNA_MOUSE Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 90.5 bits (223), Expect = 1e-18
Identities = 37/46 (80%), Positives = 43/46 (93%)
Frame = +1
Query: 1 ACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHR 138
ACL+AG+KI GTNAEVMPAQWEFQIGPCEGI + DHLW+AR++LHR
Sbjct: 182 ACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWIARFILHR 227
>sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 90.1 bits (222), Expect = 1e-18
Identities = 36/46 (78%), Positives = 43/46 (93%)
Frame = +1
Query: 1 ACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHR 138
ACL+AG+KI GTNAEVMPAQWEFQ+GPCEGI + DHLW+AR++LHR
Sbjct: 182 ACLYAGVKIGGTNAEVMPAQWEFQVGPCEGIEMGDHLWIARFILHR 227
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,216,926
Number of Sequences: 369166
Number of extensions: 245224
Number of successful extensions: 515
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 68,354,980
effective HSP length: 21
effective length of database: 64,475,545
effective search space used: 1676364170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)