Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_028_C10
(433 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9ULA0|DNPEP_HUMAN Aspartyl aminopeptidase 122 3e-28
sp|Q9Z2W0|DNPEP_MOUSE Aspartyl aminopeptidase 116 2e-26
sp|O36014|DNPEP_SCHPO Putative aspartyl aminopeptidase 107 1e-23
sp|Q19087|DNPEP_CAEEL Putative aspartyl aminopeptidase 103 2e-22
sp|P38821|DNPEP_YEAST Putative aspartyl aminopeptidase 96 4e-20
sp|Q9HYZ3|APEB_PSEAE Probable M18-family aminopeptidase 2 95 5e-20
sp|Q87YC5|APEB_PSESM Probable M18-family aminopeptidase 2 95 5e-20
sp|Q88M44|APEB_PSEPK Probable M18-family aminopeptidase 2 94 2e-19
sp|P59951|APEB_MYCBO Probable M18-family aminopeptidase 2 77 2e-14
sp|O06634|APEB_MYCTU Probable M18-family aminopeptidase 2 77 2e-14
>sp|Q9ULA0|DNPEP_HUMAN Aspartyl aminopeptidase
Length = 475
Score = 122 bits (306), Expect = 3e-28
Identities = 56/101 (55%), Positives = 78/101 (77%)
Frame = +2
Query: 2 VLKINSNQRYASNAMTTSILREVANKSEVPLQNFVVRQDMACGSTIGPIMSANMGLATVD 181
V+K+NS QRYASNA++ +++REVANK +VPLQ+ +VR D CG+TIGPI+++ +GL +D
Sbjct: 372 VIKVNSKQRYASNAVSEALIREVANKVKVPLQDLMVRNDTPCGTTIGPILASRLGLRVLD 431
Query: 182 VGGPQLSMHSCREMTDVSSVEQAVHLFKGFFNLYPDLSRRV 304
+G PQL+MHS REM + V Q + LFKGFF L+P LS +
Sbjct: 432 LGSPQLAMHSIREMACTTGVLQTLTLFKGFFELFPSLSHNL 472
>sp|Q9Z2W0|DNPEP_MOUSE Aspartyl aminopeptidase
Length = 473
Score = 116 bits (291), Expect = 2e-26
Identities = 54/101 (53%), Positives = 76/101 (75%)
Frame = +2
Query: 2 VLKINSNQRYASNAMTTSILREVANKSEVPLQNFVVRQDMACGSTIGPIMSANMGLATVD 181
V+K+NS QRYASNA++ S++REVA + VPLQ+ +VR D CG+TIGPI+++ +GL +D
Sbjct: 370 VIKVNSKQRYASNAVSESMIREVAGQVGVPLQDLMVRNDSPCGTTIGPILASRLGLRVLD 429
Query: 182 VGGPQLSMHSCREMTDVSSVEQAVHLFKGFFNLYPDLSRRV 304
+G PQL+MHS RE + V Q + LFKGFF L+P +SR +
Sbjct: 430 LGSPQLAMHSIRETACTTGVLQTLTLFKGFFELFPSVSRNL 470
>sp|O36014|DNPEP_SCHPO Putative aspartyl aminopeptidase
Length = 467
Score = 107 bits (266), Expect = 1e-23
Identities = 49/103 (47%), Positives = 71/103 (68%)
Frame = +2
Query: 2 VLKINSNQRYASNAMTTSILREVANKSEVPLQNFVVRQDMACGSTIGPIMSANMGLATVD 181
V+K+N+NQRY +N+ +L++VA ++VP+Q+FVVR D CGSTIGP ++A G+ T+D
Sbjct: 363 VIKVNANQRYTTNSAGIVLLKKVAQLADVPIQSFVVRNDSPCGSTIGPKLAAMTGMRTLD 422
Query: 182 VGGPQLSMHSCREMTDVSSVEQAVHLFKGFFNLYPDLSRRVTL 310
+G P LSMHSCREM E AV LF FF + +L ++ +
Sbjct: 423 LGNPMLSMHSCREMCGSKDFEYAVVLFSSFFQNFANLEEKIII 465
>sp|Q19087|DNPEP_CAEEL Putative aspartyl aminopeptidase
Length = 470
Score = 103 bits (257), Expect = 2e-22
Identities = 49/91 (53%), Positives = 67/91 (73%)
Frame = +2
Query: 2 VLKINSNQRYASNAMTTSILREVANKSEVPLQNFVVRQDMACGSTIGPIMSANMGLATVD 181
V+K+N NQRYA+ + T + L++VA +++VPLQ VVR D CGST+GPI++ +GL TVD
Sbjct: 369 VVKVNVNQRYATTSTTHAALKQVAFEAQVPLQVVVVRNDSPCGSTVGPILATKLGLQTVD 428
Query: 182 VGGPQLSMHSCREMTDVSSVEQAVHLFKGFF 274
VG PQL+MHS RE D SS+ QA L+ F+
Sbjct: 429 VGCPQLAMHSIREFADTSSIYQATTLYSTFY 459
>sp|P38821|DNPEP_YEAST Putative aspartyl aminopeptidase
Length = 490
Score = 95.5 bits (236), Expect = 4e-20
Identities = 45/103 (43%), Positives = 67/103 (65%)
Frame = +2
Query: 2 VLKINSNQRYASNAMTTSILREVANKSEVPLQNFVVRQDMACGSTIGPIMSANMGLATVD 181
V+KIN+NQRY +N+ +++ +A ++VPLQ FVV D CGSTIGPI+++ G+ T+D
Sbjct: 388 VIKINANQRYMTNSPGLVLVKRLAEAAKVPLQLFVVANDSPCGSTIGPILASKTGIRTLD 447
Query: 182 VGGPQLSMHSCREMTDVSSVEQAVHLFKGFFNLYPDLSRRVTL 310
+G P LSMHS RE + +E + LFK FF Y + + +
Sbjct: 448 LGNPVLSMHSIRETGGSADLEFQIKLFKEFFERYTSIESEIVV 490
>sp|Q9HYZ3|APEB_PSEAE Probable M18-family aminopeptidase 2
Length = 429
Score = 95.1 bits (235), Expect = 5e-20
Identities = 44/91 (48%), Positives = 60/91 (65%)
Frame = +2
Query: 2 VLKINSNQRYASNAMTTSILREVANKSEVPLQNFVVRQDMACGSTIGPIMSANMGLATVD 181
V+KINSNQRYA+N+ T R + SEVP+Q+FV R DM CGSTIGPI ++ +G+ TVD
Sbjct: 333 VIKINSNQRYATNSETAGFFRHLCQDSEVPVQSFVTRSDMGCGSTIGPITASQVGVRTVD 392
Query: 182 VGGPQLSMHSCREMTDVSSVEQAVHLFKGFF 274
+G P +MHS RE+ + V + F+
Sbjct: 393 IGLPTFAMHSIRELAGSHDLAHLVKVLGAFY 423
>sp|Q87YC5|APEB_PSESM Probable M18-family aminopeptidase 2
Length = 429
Score = 95.1 bits (235), Expect = 5e-20
Identities = 43/91 (47%), Positives = 61/91 (67%)
Frame = +2
Query: 2 VLKINSNQRYASNAMTTSILREVANKSEVPLQNFVVRQDMACGSTIGPIMSANMGLATVD 181
V+K+NSNQRYA+N+ T R + EVP+Q+FVVR DM CGSTIGPI ++++G+ TVD
Sbjct: 333 VIKVNSNQRYATNSETAGFFRHLCMAEEVPVQSFVVRSDMGCGSTIGPITASHLGIRTVD 392
Query: 182 VGGPQLSMHSCREMTDVSSVEQAVHLFKGFF 274
+G P +MHS RE+ + V + F+
Sbjct: 393 IGLPTFAMHSIRELAGSHDLAHLVKVLGAFY 423
>sp|Q88M44|APEB_PSEPK Probable M18-family aminopeptidase 2
Length = 429
Score = 93.6 bits (231), Expect = 2e-19
Identities = 42/91 (46%), Positives = 61/91 (67%)
Frame = +2
Query: 2 VLKINSNQRYASNAMTTSILREVANKSEVPLQNFVVRQDMACGSTIGPIMSANMGLATVD 181
V+K+N+NQRYA+N+ T R + EVP+Q+FVVR DM CGSTIGPI ++++G+ TVD
Sbjct: 333 VIKVNNNQRYATNSETAGFFRHLCMAEEVPVQSFVVRSDMGCGSTIGPITASHLGVRTVD 392
Query: 182 VGGPQLSMHSCREMTDVSSVEQAVHLFKGFF 274
+G P +MHS RE+ + V + F+
Sbjct: 393 IGLPTFAMHSIRELCGSHDLAHLVKVLTAFY 423
>sp|P59951|APEB_MYCBO Probable M18-family aminopeptidase 2
Length = 433
Score = 76.6 bits (187), Expect = 2e-14
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Frame = +2
Query: 2 VLKINSNQRYASNAMTTSILREVANKSEVPLQNFVVRQDMACGSTIGPIMSANMGLATVD 181
VLK++ N RYA++ T + ++ VP+Q + R D+ CGSTIGP+ +A G+ TVD
Sbjct: 336 VLKVHPNLRYATDGRTAAAFALACQRAGVPMQRYEHRADLPCGSTIGPLAAARTGIPTVD 395
Query: 182 VGGPQLSMHSCREMT---DVSSVEQAVHLF 262
VG QL+MHS RE+ DV++ A+ F
Sbjct: 396 VGAAQLAMHSARELMGAHDVAAYSAALQAF 425
>sp|O06634|APEB_MYCTU Probable M18-family aminopeptidase 2
Length = 433
Score = 76.6 bits (187), Expect = 2e-14
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Frame = +2
Query: 2 VLKINSNQRYASNAMTTSILREVANKSEVPLQNFVVRQDMACGSTIGPIMSANMGLATVD 181
VLK++ N RYA++ T + ++ VP+Q + R D+ CGSTIGP+ +A G+ TVD
Sbjct: 336 VLKVHPNLRYATDGRTAAAFALACQRAGVPMQRYEHRADLPCGSTIGPLAAARTGIPTVD 395
Query: 182 VGGPQLSMHSCREMT---DVSSVEQAVHLF 262
VG QL+MHS RE+ DV++ A+ F
Sbjct: 396 VGAAQLAMHSARELMGAHDVAAYSAALQAF 425
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,387,251
Number of Sequences: 369166
Number of extensions: 1009502
Number of successful extensions: 2701
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2701
length of database: 68,354,980
effective HSP length: 100
effective length of database: 49,881,480
effective search space used: 2144903640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)