Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_028_C08
(412 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P07901|HS90A_MOUSE Heat shock protein HSP 90-alpha (HSP ... 162 2e-40
sp|P46633|HS90A_CRIGR Heat shock protein HSP 90-alpha (HSP 86) 162 2e-40
sp|P07900|HS90A_HUMAN Heat shock protein HSP 90-alpha (HSP 86) 162 3e-40
sp|O02705|HS90A_PIG Heat shock protein HSP 90-alpha (HSP 86) 160 9e-40
sp|P11501|HS90A_CHICK Heat shock protein HSP 90-alpha 159 2e-39
sp|O61998|HSP90_BRUPA Heat shock protein 90 159 2e-39
sp|P08238|HS90B_HUMAN Heat shock protein HSP 90-beta (HSP 8... 157 1e-38
sp|Q9GKX8|HS90B_HORSE Heat shock protein HSP 90-beta (HSP 84) 156 1e-38
sp|P11499|HS90B_MOUSE Heat shock protein HSP 90-beta (HSP 8... 156 1e-38
sp|Q9GKX7|HS90A_HORSE Heat shock protein HSP 90-alpha (HSP 86) 154 5e-38
>sp|P07901|HS90A_MOUSE Heat shock protein HSP 90-alpha (HSP 86) (Tumor specific
transplantation 86 kDa antigen) (TSTA)
Length = 733
Score = 162 bits (411), Expect = 2e-40
Identities = 82/120 (68%), Positives = 101/120 (84%), Gaps = 3/120 (2%)
Frame = +1
Query: 1 KAQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSLLSS 180
KAQALRD+STMGYMAAKKHLEINPDHSI++TL+ + +ADKNDKSVKDLV+LLYET+LLSS
Sbjct: 616 KAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSS 675
Query: 181 GFTLEDPQVHGNRIHRMIKLGLGIEDDDVEMDATEAG---DVPVVASTAEEDAGKMEEVD 351
GF+LEDPQ H NRI+RMIKLGLGI++DD +D T A ++P + ++D +MEEVD
Sbjct: 676 GFSLEDPQTHANRIYRMIKLGLGIDEDDPTVDDTSAAVTEEMPPL--EGDDDTSRMEEVD 733
>sp|P46633|HS90A_CRIGR Heat shock protein HSP 90-alpha (HSP 86)
Length = 733
Score = 162 bits (411), Expect = 2e-40
Identities = 82/120 (68%), Positives = 101/120 (84%), Gaps = 3/120 (2%)
Frame = +1
Query: 1 KAQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSLLSS 180
KAQALRD+STMGYMAAKKHLEINPDHSI++TL+ + +ADKNDKSVKDLV+LLYET+LLSS
Sbjct: 616 KAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSS 675
Query: 181 GFTLEDPQVHGNRIHRMIKLGLGIEDDDVEMDATEAG---DVPVVASTAEEDAGKMEEVD 351
GF+LEDPQ H NRI+RMIKLGLGI++DD +D T A ++P + ++D +MEEVD
Sbjct: 676 GFSLEDPQTHANRIYRMIKLGLGIDEDDPTVDDTSAAVTEEMPPL--EGDDDTSRMEEVD 733
>sp|P07900|HS90A_HUMAN Heat shock protein HSP 90-alpha (HSP 86)
Length = 732
Score = 162 bits (409), Expect = 3e-40
Identities = 82/120 (68%), Positives = 100/120 (83%), Gaps = 3/120 (2%)
Frame = +1
Query: 1 KAQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSLLSS 180
KAQALRD+STMGYMAAKKHLEINPDHSI++TL+ + +ADKNDKSVKDLV+LLYET+LLSS
Sbjct: 615 KAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSS 674
Query: 181 GFTLEDPQVHGNRIHRMIKLGLGIEDDDVEMDATEAG---DVPVVASTAEEDAGKMEEVD 351
GF+LEDPQ H NRI+RMIKLGLGI++DD D T A ++P + ++D +MEEVD
Sbjct: 675 GFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPL--EGDDDTSRMEEVD 732
>sp|O02705|HS90A_PIG Heat shock protein HSP 90-alpha (HSP 86)
Length = 733
Score = 160 bits (405), Expect = 9e-40
Identities = 81/120 (67%), Positives = 100/120 (83%), Gaps = 3/120 (2%)
Frame = +1
Query: 1 KAQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSLLSS 180
KAQALRD+STMGYMAAKKHLEINPDHSI++TL+ + +ADKNDKSVKDLV+LLYET+LLSS
Sbjct: 616 KAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSS 675
Query: 181 GFTLEDPQVHGNRIHRMIKLGLGIEDDDVEMDATEAG---DVPVVASTAEEDAGKMEEVD 351
GF+LEDPQ H NRI+RMIKLGLGI++DD D + A ++P + ++D +MEEVD
Sbjct: 676 GFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDSSAAVTEEMPPL--EGDDDTSRMEEVD 733
>sp|P11501|HS90A_CHICK Heat shock protein HSP 90-alpha
Length = 728
Score = 159 bits (403), Expect = 2e-39
Identities = 80/118 (67%), Positives = 98/118 (83%), Gaps = 1/118 (0%)
Frame = +1
Query: 1 KAQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSLLSS 180
KAQALRD+STMGYMAAKKHLEINPDHSI++TL+ + +ADKNDKSVKDLV+LLYET+LLSS
Sbjct: 611 KAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSS 670
Query: 181 GFTLEDPQVHGNRIHRMIKLGLGIEDDDVEM-DATEAGDVPVVASTAEEDAGKMEEVD 351
GF+LEDPQ H NRI+RMIKLGLGI++DD +A+ A + ++D +MEEVD
Sbjct: 671 GFSLEDPQTHANRIYRMIKLGLGIDEDDTAAEEASPAVTEEMPPLEGDDDTSRMEEVD 728
>sp|O61998|HSP90_BRUPA Heat shock protein 90
Length = 717
Score = 159 bits (403), Expect = 2e-39
Identities = 85/122 (69%), Positives = 104/122 (85%), Gaps = 5/122 (4%)
Frame = +1
Query: 1 KAQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSLLSS 180
KAQALRDSSTMGYMAAKKHLEINPDHS++K L+ RV+ADKNDK+VKDLV+LL+ET+LLSS
Sbjct: 597 KAQALRDSSTMGYMAAKKHLEINPDHSVIKALRERVEADKNDKTVKDLVVLLFETALLSS 656
Query: 181 GFTLEDPQVHGNRIHRMIKLGLGI-EDDDVEMDATEAGD----VPVVASTAEEDAGKMEE 345
GF+LEDPQ+H +RI+RMIKLGL I ED++ E A+ +G+ VP + AEEDA +MEE
Sbjct: 657 GFSLEDPQLHASRIYRMIKLGLDITEDEEEEAIASVSGEKDECVPNLVG-AEEDASRMEE 715
Query: 346 VD 351
VD
Sbjct: 716 VD 717
>sp|P08238|HS90B_HUMAN Heat shock protein HSP 90-beta (HSP 84) (HSP 90)
Length = 724
Score = 157 bits (396), Expect = 1e-38
Identities = 79/120 (65%), Positives = 100/120 (83%), Gaps = 3/120 (2%)
Frame = +1
Query: 1 KAQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSLLSS 180
KAQALRD+STMGYM AKKHLEINPDH I++TL+ + +ADKNDK+VKDLV+LL+ET+LLSS
Sbjct: 607 KAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSS 666
Query: 181 GFTLEDPQVHGNRIHRMIKLGLGIEDDDV---EMDATEAGDVPVVASTAEEDAGKMEEVD 351
GF+LEDPQ H NRI+RMIKLGLGI++D+V E +A ++P + +EDA +MEEVD
Sbjct: 667 GFSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPNAAVPDEIPPL--EGDEDASRMEEVD 724
>sp|Q9GKX8|HS90B_HORSE Heat shock protein HSP 90-beta (HSP 84)
Length = 724
Score = 156 bits (395), Expect = 1e-38
Identities = 79/120 (65%), Positives = 99/120 (82%), Gaps = 3/120 (2%)
Frame = +1
Query: 1 KAQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSLLSS 180
KAQALRD+STMGYM AKKHLEINPDH I++TL+ + +ADKNDK+VKDLV+LL+ET+LLSS
Sbjct: 607 KAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSS 666
Query: 181 GFTLEDPQVHGNRIHRMIKLGLGIEDDDV---EMDATEAGDVPVVASTAEEDAGKMEEVD 351
GF+LEDPQ H NRI+RMIKLGLGI++D+V E A ++P + +EDA +MEEVD
Sbjct: 667 GFSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPSAAVPDEIPPL--EGDEDASRMEEVD 724
>sp|P11499|HS90B_MOUSE Heat shock protein HSP 90-beta (HSP 84) (Tumor-specific
transplantation 84 kDa antigen) (TSTA)
Length = 724
Score = 156 bits (395), Expect = 1e-38
Identities = 79/120 (65%), Positives = 99/120 (82%), Gaps = 3/120 (2%)
Frame = +1
Query: 1 KAQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSLLSS 180
KAQALRD+STMGYM AKKHLEINPDH I++TL+ + +ADKNDK+VKDLV+LL+ET+LLSS
Sbjct: 607 KAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSS 666
Query: 181 GFTLEDPQVHGNRIHRMIKLGLGIEDDDV---EMDATEAGDVPVVASTAEEDAGKMEEVD 351
GF+LEDPQ H NRI+RMIKLGLGI++D+V E A ++P + +EDA +MEEVD
Sbjct: 667 GFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAVPDEIPPL--EGDEDASRMEEVD 724
>sp|Q9GKX7|HS90A_HORSE Heat shock protein HSP 90-alpha (HSP 86)
Length = 719
Score = 154 bits (390), Expect = 5e-38
Identities = 78/117 (66%), Positives = 97/117 (82%), Gaps = 3/117 (2%)
Frame = +1
Query: 1 KAQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSLLSS 180
KAQALRD+STMGYMAAKKHLEINPDHSI++TL+ + +ADKNDKSVKDLV+LLYET+LLSS
Sbjct: 605 KAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSS 664
Query: 181 GFTLEDPQVHGNRIHRMIKLGLGIEDDDVEMDATEAG---DVPVVASTAEEDAGKME 342
GF+LEDPQ H NRI+RMIKLGLGI++DD D + A ++P + ++D +ME
Sbjct: 665 GFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDSSAAVTEEMPPL--EGDDDTSRME 719
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,266,882
Number of Sequences: 369166
Number of extensions: 629878
Number of successful extensions: 2060
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2013
length of database: 68,354,980
effective HSP length: 99
effective length of database: 50,066,215
effective search space used: 1852449955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)