Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_028_B18
(327 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3... 80 1e-15
sp|P34269|TYR1_CAEEL Putative tyrosinase-like protein tyr-1... 57 1e-08
sp|Q20191|NAS13_CAEEL Zinc metalloproteinase nas-13 precurs... 54 1e-07
sp|Q19269|NAS14_CAEEL Zinc metalloproteinase nas-14 precurs... 49 4e-06
sp|P30652|YOW6_CAEEL Hypothetical protein ZK643.6 precursor 46 3e-05
sp|P55115|NAS15_CAEEL Zinc metalloproteinase nas-15 precurs... 43 2e-04
sp|Q9XTD6|NAS12_CAEEL Zinc metalloproteinase nas-12 precurs... 40 0.001
sp|P54190|TES26_TOXCA 26 kDa secreted antigen precursor (To... 39 0.005
sp|Q09662|YS51_CAEEL Hypothetical protein ZK673.1 in chromo... 36 0.024
sp|Q21432|NAS11_CAEEL Zinc metalloproteinase nas-11 precurs... 35 0.040
>sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3 precursor
Length = 683
Score = 80.5 bits (197), Expect = 1e-15
Identities = 41/135 (30%), Positives = 56/135 (41%), Gaps = 35/135 (25%)
Frame = +2
Query: 20 NSNPNCLNSHESCDTWADRGECASNPGYMLVSCKKACNVCGKENK--------------- 154
N N C + H +C W+ GEC NP +M +C+ +C CG+
Sbjct: 501 NINEECSDRHTNCAMWSRSGECNKNPLWMSENCRSSCQKCGRSRAATCGGGGGADSISNP 560
Query: 155 --------------------CADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSK 274
C + + CPI A+ G C S+P +M CK SCGVC +
Sbjct: 561 TTMPPATNNGQQNTPCDSPMCYNEDQCCPIWAQRGQCRSNPGYMTCQCKVSCGVCRPNYV 620
Query: 275 NRPCVDANQDCAGWA 319
PC D + DCA WA
Sbjct: 621 YGPCADYHYDCAAWA 635
Score = 77.4 bits (189), Expect = 9e-15
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +2
Query: 26 NPNCLNSHESCDTWADRGECASNPGYMLVSCKKACNVCGKE---NKCADYRKRCPIMAKY 196
+P C N + C WA RG+C SNPGYM CK +C VC CADY C A+
Sbjct: 578 SPMCYNEDQCCPIWAQRGQCRSNPGYMTCQCKVSCGVCRPNYVYGPCADYHYDCAAWARR 637
Query: 197 GLCESDPRFMLQNCKESCGVC 259
G C + ++M +NC+ SC C
Sbjct: 638 GECLKN-KWMPENCRRSCNTC 657
Score = 72.8 bits (177), Expect = 2e-13
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +2
Query: 32 NCLNSHESCDTWADRGECASNPGYMLVSCKKACNVC----GKENKCADYRKRCPIMAKYG 199
+C N +E C W+ +GEC NP YM V CK +C C +C+D C + ++ G
Sbjct: 461 SCFNENECCGPWSAKGECQKNPVYMNVWCKASCRQCTPNYNINEECSDRHTNCAMWSRSG 520
Query: 200 LCESDPRFMLQNCKESCGVCDGSSKNRPC 286
C +P +M +NC+ SC C G S+ C
Sbjct: 521 ECNKNPLWMSENCRSSCQKC-GRSRAATC 548
Score = 40.8 bits (94), Expect = 0.001
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 35 CLNSHESCDTWADRGECASNPGYMLVSCKKACNVCGKENKCA 160
C + H C WA RGEC N +M +C+++CN C + + A
Sbjct: 624 CADYHYDCAAWARRGECLKNK-WMPENCRRSCNTCVNQQQLA 664
Score = 38.1 bits (87), Expect = 0.006
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 137 CGKENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGS-SKNRPCVDANQDCAG 313
C EN+C C + G C+ +P +M CK SC C + + N C D + +CA
Sbjct: 462 CFNENEC------CGPWSAKGECQKNPVYMNVWCKASCRQCTPNYNINEECSDRHTNCAM 515
Query: 314 WAAS 325
W+ S
Sbjct: 516 WSRS 519
>sp|P34269|TYR1_CAEEL Putative tyrosinase-like protein tyr-1 precursor
Length = 601
Score = 57.0 bits (136), Expect = 1e-08
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +2
Query: 32 NCLNSHESCDTWADRGECASNPGYMLVSCKKACNVCGKENK---CADYRKRCPIMAKYGL 202
NC N C+ W+ + EC +N YM C+K+C +C + C D C
Sbjct: 479 NCYNEDPCCNQWSRQNECRTNTVYMNRYCRKSCGLCQSNDNNRGCHDRHISCAYWRGQNF 538
Query: 203 CESDPRFMLQNCKESCGVCD 262
C ++M +NC+ +CG C+
Sbjct: 539 CTRRRQWMAENCQATCGWCN 558
Score = 42.0 bits (97), Expect = 4e-04
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 146 ENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRPCVDANQDCAGW 316
++ C + C ++ C ++ +M + C++SCG+C + NR C D + CA W
Sbjct: 477 QSNCYNEDPCCNQWSRQNECRTNTVYMNRYCRKSCGLCQSNDNNRGCHDRHISCAYW 533
>sp|Q20191|NAS13_CAEEL Zinc metalloproteinase nas-13 precursor (Nematode astacin 13)
Length = 527
Score = 53.5 bits (127), Expect = 1e-07
Identities = 28/61 (45%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 152 KCADYRKRCPIMAKYGLCES--DPRFMLQNCKESCGVCDGSSKNRP-CVDANQDCAGWAA 322
KC D RK C +A+ G CES RFM +NC SCG C K + C DA C WA
Sbjct: 444 KCEDRRKDCEFLARAGHCESRFSIRFMTENCANSCGKCIAEEKRKEVCEDARTWCERWAN 503
Query: 323 S 325
S
Sbjct: 504 S 504
Score = 42.0 bits (97), Expect = 4e-04
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Frame = +2
Query: 35 CLNSHESCDTWADRGECASNPG--YMLVSCKKACNVCGKENK----CADYRKRCPIMAKY 196
C + + C+ A G C S +M +C +C C E K C D R C A
Sbjct: 445 CEDRRKDCEFLARAGHCESRFSIRFMTENCANSCGKCIAEEKRKEVCEDARTWCERWANS 504
Query: 197 GLCESD--PRFMLQNCKESCGVC 259
G+C +M Q C +SC C
Sbjct: 505 GMCNQTVFKDYMRQKCAKSCNFC 527
>sp|Q19269|NAS14_CAEEL Zinc metalloproteinase nas-14 precursor (Nematode astacin 14)
Length = 503
Score = 48.9 bits (115), Expect = 4e-06
Identities = 34/127 (26%), Positives = 41/127 (32%), Gaps = 49/127 (38%)
Frame = +2
Query: 26 NPNCLNSHESCDTWADRGECASNPGYMLVSCKKACNVCG-------------------KE 148
N C + + C W G C + YM C+KACN+C KE
Sbjct: 377 NKKCEDLNAHCGMWEQLGHCQHSVKYMAHYCRKACNLCEVEVTTTTTTTPKPVPRNKEKE 436
Query: 149 NK------------------------------CADYRKRCPIMAKYGLCESDPRFMLQNC 238
NK C D C AK G C S+ +FM C
Sbjct: 437 NKSASSTTRGTSTATSTTPKTTTTTTSAPKEKCEDKNLFCSYWAKIGECNSESKFMKIFC 496
Query: 239 KESCGVC 259
K SCG C
Sbjct: 497 KASCGKC 503
Score = 34.3 bits (77), Expect = 0.090
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +2
Query: 143 KENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCD 262
+ KC D C + + G C+ ++M C+++C +C+
Sbjct: 376 RNKKCEDLNAHCGMWEQLGHCQHSVKYMAHYCRKACNLCE 415
>sp|P30652|YOW6_CAEEL Hypothetical protein ZK643.6 precursor
Length = 180
Score = 45.8 bits (107), Expect = 3e-05
Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +2
Query: 8 GDGDNSNPNCLNSHESCDTWADRGECASNPGYMLVSCKKACNVCGKENKCADYRKRCPIM 187
G+G C + C +R M C K CN C N C D K CPI
Sbjct: 98 GNGGTGTQECTDLANDCSYNQNRCSVKEYSSLMHRLCPKTCNAC---NICEDANKMCPIW 154
Query: 188 AKYGLCES-DPRFMLQNCKESCGVC 259
G C D + ++C +SC +C
Sbjct: 155 VPRGFCSKFDHDKVQKSCAKSCNIC 179
>sp|P55115|NAS15_CAEEL Zinc metalloproteinase nas-15 precursor (Nematode astacin 15)
Length = 571
Score = 43.1 bits (100), Expect = 2e-04
Identities = 28/118 (23%), Positives = 38/118 (32%), Gaps = 43/118 (36%)
Frame = +2
Query: 35 CLNSHESCDTWADRGECASNPGYMLVSCKKACNVC--GKENK------------------ 154
C N CD A +G C NPG+M +C +C +C KE +
Sbjct: 354 CRNLRGDCDDLAKQGWCIRNPGWMRANCPISCGMCIPTKETQKPYVQTTTQAATTTARPQ 413
Query: 155 -----------------------CADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVC 259
C D R C ++ C+ FM C +SCG C
Sbjct: 414 KPVTQPIQPLPPVPPLPPTTPEDCEDLRVDCLVLVSQRYCKISQNFMKSYCAKSCGFC 471
Score = 38.5 bits (88), Expect = 0.005
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 143 KENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVC 259
K ++C + R C +AK G C +P +M NC SCG+C
Sbjct: 350 KPSECRNLRGDCDDLAKQGWCIRNPGWMRANCPISCGMC 388
Score = 30.4 bits (67), Expect = 1.3
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 149 NKCADYRKRCPIMAKYGLCESD-PRFMLQNCKESCGVC 259
++C+D + C G CE +M +NC SCG+C
Sbjct: 534 SECSDRKHFCSHWKSAGFCEGIFMNYMKKNCPASCGLC 571
>sp|Q9XTD6|NAS12_CAEEL Zinc metalloproteinase nas-12 precursor (Nematode astacin 12)
Length = 384
Score = 40.4 bits (93), Expect = 0.001
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 24/93 (25%)
Frame = +2
Query: 53 SCDTWADRGECASNPGY---MLVSCKKACNVCG-----------------KENKCADYRK 172
SC+ RG C NP Y M+ SC+K C +C K KC D
Sbjct: 295 SCEGNRRRGMC-KNPFYKQMMIKSCQKTCRLCSYTRMIDEDDDLTPNTTVKSVKCEDKHP 353
Query: 173 RCPIMAKYGLCE----SDPRFMLQNCKESCGVC 259
RC I + G C D R+ L C ++C +C
Sbjct: 354 RCDIYSHNGFCTLPFYDDVRYQL--CAKTCNLC 384
Score = 28.9 bits (63), Expect = 3.8
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 11/56 (19%)
Frame = +2
Query: 5 IGDGDNSNPN-------CLNSHESCDTWADRGECA----SNPGYMLVSCKKACNVC 139
I + D+ PN C + H CD ++ G C + Y L C K CN+C
Sbjct: 331 IDEDDDLTPNTTVKSVKCEDKHPRCDIYSHNGFCTLPFYDDVRYQL--CAKTCNLC 384
>sp|P54190|TES26_TOXCA 26 kDa secreted antigen precursor (Toxocara excretory-secretory
antigen 26) (TES-26)
Length = 262
Score = 38.5 bits (88), Expect = 0.005
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Frame = +2
Query: 35 CLNSHESCDTWADRGECASNPGYMLVS--CKKACNVCGKENKCADYRKRCPIMAKYGLCE 208
C++S C A+ G C + P ++ C++ CN C C D C A LC+
Sbjct: 23 CMDSASDCA--ANAGSCFTRPVSQVLQNRCQRTCNTCD----CRDEANNCA--ASINLCQ 74
Query: 209 SDPRF---MLQNCKESCGVCDG 265
+ P F + C+++CG+C G
Sbjct: 75 N-PTFEPLVRDRCQKTCGLCAG 95
>sp|Q09662|YS51_CAEEL Hypothetical protein ZK673.1 in chromosome II precursor
Length = 154
Score = 36.2 bits (82), Expect = 0.024
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +2
Query: 155 CADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRP--CVDANQDCAGW 316
C Y C AKY + Q C ++CG C G S P CVD++ +CA W
Sbjct: 75 CTQYTSLCS-NAKY------TPLLQQFCPKTCGFCGGGSTAAPVQCVDSSTNCANW 123
>sp|Q21432|NAS11_CAEEL Zinc metalloproteinase nas-11 precursor (Nematode astacin 11)
Length = 579
Score = 35.4 bits (80), Expect = 0.040
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +2
Query: 29 PNCLNSHESCDTWADRGECASNPG---YMLVSCKKACNVC 139
P C + + C WA + C NPG YM +CKK+C +C
Sbjct: 537 PGCDDKNVYCGAWALKDLC-KNPGHDQYMAANCKKSCGLC 575
Score = 30.8 bits (68), Expect = 1.00
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 155 CADYRKRCPIMAKYGLCESD--PRFMLQNCKESCGVC 259
C D C A LC++ ++M NCK+SCG+C
Sbjct: 539 CDDKNVYCGAWALKDLCKNPGHDQYMAANCKKSCGLC 575
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,694,452
Number of Sequences: 369166
Number of extensions: 902381
Number of successful extensions: 3105
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3060
length of database: 68,354,980
effective HSP length: 77
effective length of database: 54,130,385
effective search space used: 1678041935
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)