Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_028_A05
(712 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P62137|PP1A_MOUSE Serine/threonine protein phosphatase P... 331 1e-90
sp|P62139|PP1A_RABIT Serine/threonine protein phosphatase P... 331 1e-90
sp|P48727|YMEX_CAEEL Putative serine/threonine protein phos... 331 1e-90
sp|P48461|PP11_DROME Serine/threonine protein phosphatase a... 330 2e-90
sp|P36873|PP1G_HUMAN Serine/threonine protein phosphatase P... 325 6e-89
sp|P63088|PP1G_RAT Serine/threonine protein phosphatase PP1... 325 6e-89
sp|Q8WMS6|PP1A_CANFA Serine/threonine protein phosphatase P... 323 3e-88
sp|P36874|PP1G_XENLA Serine/threonine protein phosphatase P... 322 6e-88
sp|Q8MJ46|PP1G_CANFA Serine/threonine protein phosphatase P... 319 4e-87
sp|P62140|PP1B_HUMAN Serine/threonine protein phosphatase P... 318 9e-87
>sp|P62137|PP1A_MOUSE Serine/threonine protein phosphatase PP1-alpha catalytic subunit
(PP-1A)
Length = 330
Score = 331 bits (848), Expect = 1e-90
Identities = 157/172 (91%), Positives = 160/172 (93%), Gaps = 3/172 (1%)
Frame = +3
Query: 3 FTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 182
FTDCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK
Sbjct: 152 FTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 211
Query: 183 ETMGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 362
+ GWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN
Sbjct: 212 DVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 271
Query: 363 YCGEFDNAGAMMSVDETLMCSFQILKPADKKKFPY---RDMNQGNRPITPPR 509
YCGEFDNAGAMMSVDETLMCSFQILKPADK K Y +N G RPITPPR
Sbjct: 272 YCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKYGQFSGLNPGGRPITPPR 323
>sp|P62139|PP1A_RABIT Serine/threonine protein phosphatase PP1-alpha catalytic subunit
(PP-1A)
sp|P62136|PP1A_HUMAN Serine/threonine protein phosphatase PP1-alpha catalytic subunit
(PP-1A)
sp|P62138|PP1A_RAT Serine/threonine protein phosphatase PP1-alpha catalytic subunit
(PP-1A)
Length = 330
Score = 331 bits (848), Expect = 1e-90
Identities = 157/172 (91%), Positives = 160/172 (93%), Gaps = 3/172 (1%)
Frame = +3
Query: 3 FTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 182
FTDCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK
Sbjct: 152 FTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 211
Query: 183 ETMGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 362
+ GWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN
Sbjct: 212 DVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 271
Query: 363 YCGEFDNAGAMMSVDETLMCSFQILKPADKKKFPY---RDMNQGNRPITPPR 509
YCGEFDNAGAMMSVDETLMCSFQILKPADK K Y +N G RPITPPR
Sbjct: 272 YCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKYGQFSGLNPGGRPITPPR 323
>sp|P48727|YMEX_CAEEL Putative serine/threonine protein phosphatase F56C9.1 in chromosome
III
Length = 333
Score = 331 bits (848), Expect = 1e-90
Identities = 155/170 (91%), Positives = 161/170 (94%), Gaps = 1/170 (0%)
Frame = +3
Query: 3 FTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 182
FTDCFNCLP+AAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK
Sbjct: 151 FTDCFNCLPVAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 210
Query: 183 ETMGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 362
+ GWGENDRGVSFTFG EVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN
Sbjct: 211 DVTGWGENDRGVSFTFGPEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 270
Query: 363 YCGEFDNAGAMMSVDETLMCSFQILKPADKKKFPYRDMNQG-NRPITPPR 509
YCGEFDNAG+MM+VDETLMCSFQILKPADKKK+PY G NRP+TPPR
Sbjct: 271 YCGEFDNAGSMMTVDETLMCSFQILKPADKKKYPYGAGGVGSNRPVTPPR 320
>sp|P48461|PP11_DROME Serine/threonine protein phosphatase alpha-1 isoform
Length = 327
Score = 330 bits (847), Expect = 2e-90
Identities = 152/178 (85%), Positives = 161/178 (90%)
Frame = +3
Query: 3 FTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 182
FTDCFNCLP+AAI+DEKIFCCHGGLSPDL SMEQIRRIMRPTDVPDQGLLCDLLWSDPDK
Sbjct: 150 FTDCFNCLPVAAIVDEKIFCCHGGLSPDLSSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 209
Query: 183 ETMGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 362
+TMGWGENDRGVSFTFGAEVV KFL KH+ DLICRAHQVVEDGYEFFAKRQLVTLFSAPN
Sbjct: 210 DTMGWGENDRGVSFTFGAEVVGKFLQKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 269
Query: 363 YCGEFDNAGAMMSVDETLMCSFQILKPADKKKFPYRDMNQGNRPITPPRXXXXKGKNK 536
YCGEFDNAGAMMSVD+TLMCSFQILKPADK++F Y + RP+TPPR K K K
Sbjct: 270 YCGEFDNAGAMMSVDDTLMCSFQILKPADKRRFVYPNFGSSGRPLTPPRGANNKNKKK 327
>sp|P36873|PP1G_HUMAN Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G) (Protein phosphatase 1C catalytic subunit)
Length = 323
Score = 325 bits (834), Expect = 6e-89
Identities = 155/178 (87%), Positives = 160/178 (89%)
Frame = +3
Query: 3 FTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 182
FTDCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK
Sbjct: 152 FTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 211
Query: 183 ETMGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 362
+ +GWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN
Sbjct: 212 DVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 271
Query: 363 YCGEFDNAGAMMSVDETLMCSFQILKPADKKKFPYRDMNQGNRPITPPRXXXXKGKNK 536
YCGEFDNAGAMMSVDETLMCSFQILKPA+KKK RP+TPPR K K
Sbjct: 272 YCGEFDNAGAMMSVDETLMCSFQILKPAEKKK------PNATRPVTPPRGMITKQAKK 323
>sp|P63088|PP1G_RAT Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G) (Protein phosphatase 1C catalytic subunit)
sp|P61287|PP1G_BOVIN Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G) (Protein phosphatase 1C catalytic subunit)
sp|P63087|PP1G_MOUSE Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G) (Protein phosphatase 1C catalytic subunit)
Length = 323
Score = 325 bits (834), Expect = 6e-89
Identities = 155/178 (87%), Positives = 160/178 (89%)
Frame = +3
Query: 3 FTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 182
FTDCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK
Sbjct: 152 FTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 211
Query: 183 ETMGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 362
+ +GWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN
Sbjct: 212 DVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 271
Query: 363 YCGEFDNAGAMMSVDETLMCSFQILKPADKKKFPYRDMNQGNRPITPPRXXXXKGKNK 536
YCGEFDNAGAMMSVDETLMCSFQILKPA+KKK RP+TPPR K K
Sbjct: 272 YCGEFDNAGAMMSVDETLMCSFQILKPAEKKK------PNATRPVTPPRGMITKQAKK 323
>sp|Q8WMS6|PP1A_CANFA Serine/threonine protein phosphatase PP1-alpha catalytic subunit
(PP-1A)
Length = 330
Score = 323 bits (828), Expect = 3e-88
Identities = 155/172 (90%), Positives = 158/172 (91%), Gaps = 3/172 (1%)
Frame = +3
Query: 3 FTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 182
FTD FN LPIAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK
Sbjct: 152 FTDXFNXLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 211
Query: 183 ETMGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 362
+ GWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN
Sbjct: 212 DVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 271
Query: 363 YCGEFDNAGAMMSVDETLMCSFQILKPADKKKFPY---RDMNQGNRPITPPR 509
YCGEFDNAGAMMSVDETLMCSFQILKPADK K Y +N G RPITPPR
Sbjct: 272 YCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKYGQFSGLNPGGRPITPPR 323
>sp|P36874|PP1G_XENLA Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G)
Length = 323
Score = 322 bits (825), Expect = 6e-88
Identities = 154/178 (86%), Positives = 160/178 (89%)
Frame = +3
Query: 3 FTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 182
FTDCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK
Sbjct: 152 FTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 211
Query: 183 ETMGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 362
+ +GWGEN RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN
Sbjct: 212 DILGWGENYRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 271
Query: 363 YCGEFDNAGAMMSVDETLMCSFQILKPADKKKFPYRDMNQGNRPITPPRXXXXKGKNK 536
YCGEFDNAGAMMSVDETLMCSFQILKPA+KKK +RP+TPPR K K
Sbjct: 272 YCGEFDNAGAMMSVDETLMCSFQILKPAEKKK------PNASRPVTPPRGMITKQAKK 323
>sp|Q8MJ46|PP1G_CANFA Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G) (Protein phosphatase 1C catalytic subunit)
Length = 323
Score = 319 bits (818), Expect = 4e-87
Identities = 153/178 (85%), Positives = 158/178 (88%)
Frame = +3
Query: 3 FTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 182
FTDCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK
Sbjct: 152 FTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 211
Query: 183 ETMGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 362
+ +GWGE DRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN
Sbjct: 212 DVLGWGETDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 271
Query: 363 YCGEFDNAGAMMSVDETLMCSFQILKPADKKKFPYRDMNQGNRPITPPRXXXXKGKNK 536
YCGEFDNAGAMMSVDETLMCSFQILKPA+KKK RP+TP R K K
Sbjct: 272 YCGEFDNAGAMMSVDETLMCSFQILKPAEKKK------PNATRPVTPLRGMITKQAKK 323
>sp|P62140|PP1B_HUMAN Serine/threonine protein phosphatase PP1-beta catalytic subunit
(PP-1B)
sp|P62142|PP1B_RAT Serine/threonine protein phosphatase PP1-beta catalytic subunit
(PP-1B)
sp|P62143|PP1B_RABIT Serine/threonine protein phosphatase PP1-beta catalytic subunit
(PP-1B)
sp|P61292|PP1B_PIG Serine/threonine protein phosphatase PP1-beta catalytic subunit
(PP-1B)
sp|P62207|PP1B_CHICK Serine/threonine protein phosphatase PP1-beta catalytic subunit
(PP-1B)
sp|P62141|PP1B_MOUSE Serine/threonine protein phosphatase PP1-beta catalytic subunit
(PP-1B)
Length = 327
Score = 318 bits (815), Expect = 9e-87
Identities = 149/170 (87%), Positives = 160/170 (94%), Gaps = 1/170 (0%)
Frame = +3
Query: 3 FTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 182
FTDCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPD GLLCDLLWSDPDK
Sbjct: 151 FTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDK 210
Query: 183 ETMGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 362
+ GWGENDRGVSFTFGA+VV+KFL++HDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN
Sbjct: 211 DVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 270
Query: 363 YCGEFDNAGAMMSVDETLMCSFQILKPADKK-KFPYRDMNQGNRPITPPR 509
YCGEFDNAG MMSVDETLMCSFQILKP++KK K+ Y +N G RP+TPPR
Sbjct: 271 YCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSG-RPVTPPR 319
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,322,526
Number of Sequences: 369166
Number of extensions: 1719912
Number of successful extensions: 3872
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3764
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6267895215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)