Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_028_A03
(313 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9PRL8|ACBP_CHICK Acyl-CoA-binding protein (ACBP) (Diaze... 121 6e-28
sp|P82934|ACBP_CHAVI Acyl-CoA-binding protein (ACBP) (EP) 119 2e-27
sp|P12026|ACBP_PIG Acyl-CoA-binding protein (ACBP) (Diazepa... 119 3e-27
sp|P07108|ACBP_HUMAN Acyl-CoA-binding protein (ACBP) (Diaze... 118 5e-27
sp|P07107|ACBP_BOVIN Acyl-CoA-binding protein (ACBP) (Diaze... 117 6e-27
sp|Q8WN94|ACBP_RABIT Acyl-CoA-binding protein (ACBP) (Diaze... 114 5e-26
sp|P31786|ACBP_MOUSE Acyl-CoA-binding protein (ACBP) (Diaze... 111 5e-25
sp|P11030|ACBP_RAT Acyl-CoA-binding protein (ACBP) (Diazepa... 111 5e-25
sp|Q9TQX6|ACBP_CANFA Acyl-CoA-binding protein (ACBP) (Diaze... 110 8e-25
sp|P45882|ACBP_ANAPL Acyl-CoA-binding protein (ACBP) (Diaze... 110 1e-24
>sp|Q9PRL8|ACBP_CHICK Acyl-CoA-binding protein (ACBP) (Diazepam-binding inhibitor) (DBI)
Length = 86
Score = 121 bits (303), Expect = 6e-28
Identities = 55/86 (63%), Positives = 68/86 (79%)
Frame = +3
Query: 18 SEEEFQSCAAQMKNLKAKPTDEELLSLYGFYKQATEGDVNTVRPGMLDFKGKAKWDSWNG 197
SE FQ A ++K LK++PTD+E+L +Y YKQAT GDVNT RPGMLDFKGKAKWD+WN
Sbjct: 1 SEAAFQKAAEEVKELKSQPTDQEMLDVYSHYKQATVGDVNTDRPGMLDFKGKAKWDAWNA 60
Query: 198 VKGTSKEDARHSYVLKGKELVGRYGV 275
+KG SKEDA +YV K +EL G+YG+
Sbjct: 61 LKGMSKEDAMKAYVAKVEELKGKYGI 86
>sp|P82934|ACBP_CHAVI Acyl-CoA-binding protein (ACBP) (EP)
Length = 86
Score = 119 bits (299), Expect = 2e-27
Identities = 54/86 (62%), Positives = 67/86 (77%)
Frame = +3
Query: 18 SEEEFQSCAAQMKNLKAKPTDEELLSLYGFYKQATEGDVNTVRPGMLDFKGKAKWDSWNG 197
S+ EF A ++KNLK KP D+E+L +Y YKQAT GD+NT RPGMLDFKGKAKWD+WN
Sbjct: 1 SQAEFDKAAEEVKNLKTKPADDEMLFIYSHYKQATVGDINTERPGMLDFKGKAKWDAWNQ 60
Query: 198 VKGTSKEDARHSYVLKGKELVGRYGV 275
+KGTSKEDA SY+ K +EL +YG+
Sbjct: 61 LKGTSKEDAMKSYIDKVEELKKKYGI 86
>sp|P12026|ACBP_PIG Acyl-CoA-binding protein (ACBP) (Diazepam-binding inhibitor) (DBI)
(Endozepine) (EP) [Contains: DBI(32-86)]
Length = 86
Score = 119 bits (297), Expect = 3e-27
Identities = 52/86 (60%), Positives = 68/86 (79%)
Frame = +3
Query: 18 SEEEFQSCAAQMKNLKAKPTDEELLSLYGFYKQATEGDVNTVRPGMLDFKGKAKWDSWNG 197
S+ EF+ A ++KNLK KP D+E+L +Y YKQAT GD+NT RPG+LD KGKAKWD+WNG
Sbjct: 1 SQAEFEKAAEEVKNLKTKPADDEMLFIYSHYKQATVGDINTERPGILDLKGKAKWDAWNG 60
Query: 198 VKGTSKEDARHSYVLKGKELVGRYGV 275
+KGTSKEDA +Y+ K +EL +YG+
Sbjct: 61 LKGTSKEDAMKAYINKVEELKKKYGI 86
>sp|P07108|ACBP_HUMAN Acyl-CoA-binding protein (ACBP) (Diazepam-binding inhibitor) (DBI)
(Endozepine) (EP)
Length = 87
Score = 118 bits (295), Expect = 5e-27
Identities = 52/86 (60%), Positives = 69/86 (80%)
Frame = +3
Query: 18 SEEEFQSCAAQMKNLKAKPTDEELLSLYGFYKQATEGDVNTVRPGMLDFKGKAKWDSWNG 197
S+ EF+ A ++++LK KP+DEE+L +YG YKQAT GD+NT RPGMLDF GKAKWD+WN
Sbjct: 2 SQAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNE 61
Query: 198 VKGTSKEDARHSYVLKGKELVGRYGV 275
+KGTSKEDA +Y+ K +EL +YG+
Sbjct: 62 LKGTSKEDAMKAYINKVEELKKKYGI 87
>sp|P07107|ACBP_BOVIN Acyl-CoA-binding protein (ACBP) (Diazepam-binding inhibitor) (DBI)
(Endozepine) (EP)
Length = 87
Score = 117 bits (294), Expect = 6e-27
Identities = 53/86 (61%), Positives = 67/86 (77%)
Frame = +3
Query: 18 SEEEFQSCAAQMKNLKAKPTDEELLSLYGFYKQATEGDVNTVRPGMLDFKGKAKWDSWNG 197
S+ EF A ++K+LK KP DEE+L +Y YKQAT GD+NT RPGMLDFKGKAKWD+WN
Sbjct: 2 SQAEFDKAAEEVKHLKTKPADEEMLFIYSHYKQATVGDINTERPGMLDFKGKAKWDAWNE 61
Query: 198 VKGTSKEDARHSYVLKGKELVGRYGV 275
+KGTSKEDA +Y+ K +EL +YG+
Sbjct: 62 LKGTSKEDAMKAYIDKVEELKKKYGI 87
>sp|Q8WN94|ACBP_RABIT Acyl-CoA-binding protein (ACBP) (Diazepam-binding inhibitor) (DBI)
(Endozepine) (EP)
Length = 87
Score = 114 bits (286), Expect = 5e-26
Identities = 53/86 (61%), Positives = 65/86 (75%)
Frame = +3
Query: 18 SEEEFQSCAAQMKNLKAKPTDEELLSLYGFYKQATEGDVNTVRPGMLDFKGKAKWDSWNG 197
S+ EF+ A ++KNLK KP D E+L +Y YKQAT GDVNT RPGMLD KGKAKWD+WN
Sbjct: 2 SQAEFEKAAEEVKNLKTKPADAEMLFIYSHYKQATVGDVNTERPGMLDLKGKAKWDAWNE 61
Query: 198 VKGTSKEDARHSYVLKGKELVGRYGV 275
+KGTSKE A +YV K +EL +YG+
Sbjct: 62 LKGTSKESAMRAYVDKVEELKQKYGI 87
>sp|P31786|ACBP_MOUSE Acyl-CoA-binding protein (ACBP) (Diazepam-binding inhibitor) (DBI)
(Endozepine) (EP)
Length = 87
Score = 111 bits (278), Expect = 5e-25
Identities = 52/86 (60%), Positives = 64/86 (74%)
Frame = +3
Query: 18 SEEEFQSCAAQMKNLKAKPTDEELLSLYGFYKQATEGDVNTVRPGMLDFKGKAKWDSWNG 197
S+ EF A ++K LK +PTDEE+L +Y +KQAT GDVNT RPG+LD KGKAKWDSWN
Sbjct: 2 SQAEFDKAAEEVKRLKTQPTDEEMLFIYSHFKQATVGDVNTDRPGLLDLKGKAKWDSWNK 61
Query: 198 VKGTSKEDARHSYVLKGKELVGRYGV 275
+KGTSKE A +YV K EL +YG+
Sbjct: 62 LKGTSKESAMKTYVEKVDELKKKYGI 87
>sp|P11030|ACBP_RAT Acyl-CoA-binding protein (ACBP) (Diazepam-binding inhibitor) (DBI)
(Endozepine) (EP) [Contains: Triakontatetraneuropeptide
(TTN); Octadecaneuropeptide (ODN)]
Length = 87
Score = 111 bits (278), Expect = 5e-25
Identities = 51/86 (59%), Positives = 66/86 (76%)
Frame = +3
Query: 18 SEEEFQSCAAQMKNLKAKPTDEELLSLYGFYKQATEGDVNTVRPGMLDFKGKAKWDSWNG 197
S+ +F A ++K LK +PTDEE+L +Y +KQAT GDVNT RPG+LD KGKAKWDSWN
Sbjct: 2 SQADFDKAAEEVKRLKTQPTDEEMLFIYSHFKQATVGDVNTDRPGLLDLKGKAKWDSWNK 61
Query: 198 VKGTSKEDARHSYVLKGKELVGRYGV 275
+KGTSKE+A +YV K +EL +YG+
Sbjct: 62 LKGTSKENAMKTYVEKVEELKKKYGI 87
>sp|Q9TQX6|ACBP_CANFA Acyl-CoA-binding protein (ACBP) (Diazepam-binding inhibitor) (DBI)
(Endozepine) (EP)
Length = 87
Score = 110 bits (276), Expect = 8e-25
Identities = 49/86 (56%), Positives = 65/86 (75%)
Frame = +3
Query: 18 SEEEFQSCAAQMKNLKAKPTDEELLSLYGFYKQATEGDVNTVRPGMLDFKGKAKWDSWNG 197
S+ EF A +K+LK KP D+E+L +Y YKQAT GD+NT RPG+LD +GKAKWD+WN
Sbjct: 2 SQAEFDKAAEDVKHLKTKPADDEMLYIYSHYKQATVGDINTERPGLLDLRGKAKWDAWNQ 61
Query: 198 VKGTSKEDARHSYVLKGKELVGRYGV 275
+KGTSKEDA +YV K ++L +YG+
Sbjct: 62 LKGTSKEDAMKAYVNKVEDLKKKYGI 87
>sp|P45882|ACBP_ANAPL Acyl-CoA-binding protein (ACBP) (Diazepam-binding inhibitor) (DBI)
(Endozepine) (EP)
Length = 103
Score = 110 bits (275), Expect = 1e-24
Identities = 49/85 (57%), Positives = 63/85 (74%)
Frame = +3
Query: 21 EEEFQSCAAQMKNLKAKPTDEELLSLYGFYKQATEGDVNTVRPGMLDFKGKAKWDSWNGV 200
+ +F A ++K LK +PTDEEL LYGFYKQAT GD+N PGMLD KGKAKW++WN
Sbjct: 19 QADFDEAAEEVKKLKTRPTDEELKELYGFYKQATVGDINIECPGMLDLKGKAKWEAWNLK 78
Query: 201 KGTSKEDARHSYVLKGKELVGRYGV 275
KG SKEDA ++Y+ K K +V +YG+
Sbjct: 79 KGISKEDAMNAYISKAKTMVEKYGI 103
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,612,256
Number of Sequences: 369166
Number of extensions: 653298
Number of successful extensions: 1556
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1555
length of database: 68,354,980
effective HSP length: 72
effective length of database: 55,054,060
effective search space used: 1706675860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)