Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_P18
(524 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 155 7e-38
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 155 7e-38
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 155 7e-38
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 152 5e-37
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 151 8e-37
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 151 1e-36
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (... 150 2e-36
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 149 3e-36
sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (He... 149 4e-36
sp|P17156|HSP72_MOUSE Heat shock-related 70 kDa protein 2 (... 149 4e-36
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 155 bits (391), Expect = 7e-38
Identities = 78/148 (52%), Positives = 96/148 (64%)
Frame = +2
Query: 2 NKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKL 181
NKITITNDKGRLSK+DIERMV ++++KNSLESYA+ MKATVEDEKL
Sbjct: 499 NKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKL 558
Query: 182 KDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXX 361
+ KI++ D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 559 QGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMP 618
Query: 362 XXXXXXXXXXXXXXXXXXKQGPTVEEVD 445
GPT+EEVD
Sbjct: 619 GGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 155 bits (391), Expect = 7e-38
Identities = 78/148 (52%), Positives = 96/148 (64%)
Frame = +2
Query: 2 NKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKL 181
NKITITNDKGRLSK+DIERMV ++++KNSLESYA+ MKATVEDEKL
Sbjct: 499 NKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKL 558
Query: 182 KDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXX 361
+ KI++ D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 559 QGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMP 618
Query: 362 XXXXXXXXXXXXXXXXXXKQGPTVEEVD 445
GPT+EEVD
Sbjct: 619 GGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 155 bits (391), Expect = 7e-38
Identities = 78/148 (52%), Positives = 96/148 (64%)
Frame = +2
Query: 2 NKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKL 181
NKITITNDKGRLSK+DIERMV ++++KNSLESYA+ MKATVEDEKL
Sbjct: 499 NKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKL 558
Query: 182 KDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXX 361
+ KI++ D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 559 QGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMP 618
Query: 362 XXXXXXXXXXXXXXXXXXKQGPTVEEVD 445
GPT+EEVD
Sbjct: 619 GGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 152 bits (384), Expect = 5e-37
Identities = 79/151 (52%), Positives = 96/151 (63%), Gaps = 3/151 (1%)
Frame = +2
Query: 2 NKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKL 181
NKITITNDKGRLSK+DIERMV +++AKN LESYA+ MK+TVEDEKL
Sbjct: 499 NKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKL 558
Query: 182 KDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ---XXX 352
K KIS+ D++ I+DKC E IGWLDKNQ A ++EF++ KELEKVCNPI+TK+YQ
Sbjct: 559 KGKISDEDKQKILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCNPIITKLYQSAGGMP 618
Query: 353 XXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 445
GPT+EEVD
Sbjct: 619 GGMPEGMPGGFPGAGAAPGGGSSGPTIEEVD 649
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 151 bits (382), Expect = 8e-37
Identities = 81/148 (54%), Positives = 93/148 (62%)
Frame = +2
Query: 2 NKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKL 181
NKITITNDKGRLSKD+IERMV RIAAKN+LESYA+ MK T+EDEKL
Sbjct: 498 NKITITNDKGRLSKDEIERMVQEAEKYKADDEAQKDRIAAKNALESYAFNMKQTIEDEKL 557
Query: 182 KDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXX 361
KDKISE D+K I +KC E + WLD NQ A KDEF++ KELE VCNPI+TK+YQ
Sbjct: 558 KDKISEEDKKKIQEKCDETVRWLDGNQTAEKDEFEHRQKELESVCNPIITKLYQSAGGMP 617
Query: 362 XXXXXXXXXXXXXXXXXXKQGPTVEEVD 445
GPT+EEVD
Sbjct: 618 GGMPGGMPGGAPGAGSTG-GGPTIEEVD 644
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 151 bits (381), Expect = 1e-36
Identities = 78/153 (50%), Positives = 97/153 (63%), Gaps = 5/153 (3%)
Frame = +2
Query: 2 NKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKL 181
NKITITNDKGRLSK+DIERMV ++++KNSLESYA+ MK+TVEDEKL
Sbjct: 499 NKITITNDKGRLSKEDIERMVQEAEKYKCEDDVQRDKVSSKNSLESYAFNMKSTVEDEKL 558
Query: 182 KDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ-----X 346
+ KIS+ D+ I++KC E IGWLDKNQ A K+E+++H KELEKVCNPI+TK+YQ
Sbjct: 559 QGKISDEDKTKILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQGAGGMP 618
Query: 347 XXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 445
GPT+EEVD
Sbjct: 619 GGMPEGMAGGFPGAGGAAPGGGGSSGPTIEEVD 651
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
Length = 639
Score = 150 bits (379), Expect = 2e-36
Identities = 78/148 (52%), Positives = 94/148 (63%)
Frame = +2
Query: 2 NKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKL 181
NKITITNDKGRLSKDDI+RMV R+AAKN+LESY Y +K TVEDEKL
Sbjct: 502 NKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNALESYTYNIKQTVEDEKL 561
Query: 182 KDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXX 361
+ KISE D+ I+DKCQE I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 562 RGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ------ 615
Query: 362 XXXXXXXXXXXXXXXXXXKQGPTVEEVD 445
GPT+EEVD
Sbjct: 616 ----GGPGGGSGGGGSGASGGPTIEEVD 639
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 149 bits (377), Expect = 3e-36
Identities = 78/151 (51%), Positives = 94/151 (62%), Gaps = 3/151 (1%)
Frame = +2
Query: 2 NKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKL 181
NKITITNDKGRLSK+DIERMV +++AKN LESYA+ MK+TVEDEKL
Sbjct: 499 NKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKL 558
Query: 182 KDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ---XXX 352
K KIS+ D+ I+DKC E I WLDKNQ A KDE+++ K+LEKVCNPI+TK+YQ
Sbjct: 559 KGKISDEDKHKILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCNPIITKLYQSDGGMP 618
Query: 353 XXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 445
GPT+EEVD
Sbjct: 619 GGMPDGMPGGFQELGAAPGGGSSGPTIEEVD 649
>sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (Heat shock protein 70.2)
(Testis-specific heat shock protein-related) (HST)
Length = 633
Score = 149 bits (376), Expect = 4e-36
Identities = 77/148 (52%), Positives = 94/148 (63%)
Frame = +2
Query: 2 NKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKL 181
NKITITNDKGRLSKDDI+RMV R+AAKN++ESY Y +K TVEDEKL
Sbjct: 502 NKITITNDKGRLSKDDIDRMVQEADGYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKL 561
Query: 182 KDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXX 361
+ KISE D+ I+DKCQE I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 562 RGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ------ 615
Query: 362 XXXXXXXXXXXXXXXXXXKQGPTVEEVD 445
GPT+EEVD
Sbjct: 616 ----------GGPGGGGSSGGPTIEEVD 633
>sp|P17156|HSP72_MOUSE Heat shock-related 70 kDa protein 2 (Heat shock protein 70.2)
Length = 633
Score = 149 bits (376), Expect = 4e-36
Identities = 77/148 (52%), Positives = 94/148 (63%)
Frame = +2
Query: 2 NKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKL 181
NKITITNDKGRLSKDDI+RMV R+AAKN++ESY Y +K TVEDEKL
Sbjct: 502 NKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKL 561
Query: 182 KDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXX 361
+ KISE D+ I+DKCQE I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 562 RGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ------ 615
Query: 362 XXXXXXXXXXXXXXXXXXKQGPTVEEVD 445
GPT+EEVD
Sbjct: 616 ----------GGPGGGGSSGGPTIEEVD 633
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,388,870
Number of Sequences: 369166
Number of extensions: 437270
Number of successful extensions: 1726
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1582
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3502236525
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)