Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_P04
(229 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P30652|YOW6_CAEEL Hypothetical protein ZK643.6 precursor 43 3e-04
sp|Q29116|TENA_PIG Tenascin precursor (TN) (Hexabrachion) (... 36 0.031
sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3... 35 0.069
sp|P10039|TENA_CHICK Tenascin precursor (TN) (Hexabrachion)... 34 0.12
sp|Q09662|YS51_CAEEL Hypothetical protein ZK673.1 in chromo... 34 0.12
sp|P22105|TENX_HUMAN Tenascin-X precursor (TN-X) (Hexabrach... 33 0.20
sp|P24821|TENA_HUMAN Tenascin precursor (TN) (Hexabrachion)... 33 0.26
sp|P54190|TES26_TOXCA 26 kDa secreted antigen precursor (To... 31 0.99
sp|Q9XTD6|NAS12_CAEEL Zinc metalloproteinase nas-12 precurs... 31 0.99
sp|P61782|HIS51_METMP Imidazole glycerol phosphate synthase... 31 0.99
>sp|P30652|YOW6_CAEEL Hypothetical protein ZK643.6 precursor
Length = 180
Score = 42.7 bits (99), Expect = 3e-04
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Frame = +2
Query: 26 CTLEE----VYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMD-DRV---CRKTCGHC 178
C+++E ++ CPK+C+ C C D+ C + RG C K D D+V C K+C C
Sbjct: 121 CSVKEYSSLMHRLCPKTCNACNICEDANKMCPIWVPRGFCSKFDHDKVQKSCAKSCNIC 179
>sp|Q29116|TENA_PIG Tenascin precursor (TN) (Hexabrachion) (Cytotactin) (Neuronectin)
(GMEM) (JI) (Miotendinous antigen)
(Glioma-associated-extracellular matrix antigen) (GP
150-225) (Tenascin-C) (TN-C) (P230)
Length = 1746
Score = 35.8 bits (81), Expect = 0.031
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +2
Query: 11 KTGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 178
+TGEDC+ +CP CH G C R +C+ + DC +M C C G C
Sbjct: 429 RTGEDCS----QLRCPNDCHGRGRCVQGRCECEHGFQGYDCSEMS---CPHDCHQHGRC 480
Score = 34.7 bits (78), Expect = 0.069
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 17 GEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKM 142
G DC+ +CP CH G C D R +CD E DC ++
Sbjct: 369 GADCS----ERRCPSDCHNRGRCLDGRCECDDGFEGEDCGEL 406
Score = 29.3 bits (64), Expect = 2.9
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +2
Query: 17 GEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC 169
G +C+ E CP +CH G C D + C+ DC ++ C C
Sbjct: 182 GPNCSEPE----CPSNCHLRGQCVDGQCVCNEGFTGEDCSQL---ACPSDC 225
Score = 28.5 bits (62), Expect = 4.9
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +2
Query: 14 TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKM 142
TGEDC E+ CPK C G C + CD E DC ++
Sbjct: 306 TGEDCG--ELI--CPKDCFDRGRCINGTCYCDEGFEGEDCGRL 344
Score = 28.5 bits (62), Expect = 4.9
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 9/49 (18%)
Frame = +2
Query: 14 TGEDCTLEEVYNKCPKSCHFCGDCADSR---------PDCDVLKERGDC 133
TGEDC E+ +CP C G C D R PDC L DC
Sbjct: 492 TGEDC--REL--RCPGDCSQRGRCVDGRCVCEHGFAGPDCADLACPSDC 536
Score = 28.5 bits (62), Expect = 4.9
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +2
Query: 14 TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTCGH 175
TG+DC +CP CH G C D + C DC + R C C +
Sbjct: 554 TGKDCG----QRRCPGDCHGQGRCVDGQCVCHEGFTGLDCGQ---RSCPNDCSN 600
Score = 27.7 bits (60), Expect = 8.4
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Frame = +2
Query: 17 GEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 178
GEDC C +CH G C ++ CD DC ++ +C K C G C
Sbjct: 276 GEDCNEP----LCLHNCHGRGRCVENECVCDEGFTGEDCGEL---ICPKDCFDRGRC 325
>sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3 precursor
Length = 683
Score = 34.7 bits (78), Expect = 0.069
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 8/51 (15%)
Frame = +2
Query: 50 KCPKSCHFC------GDCADSRPDCDVLKERGDC--DKMDDRVCRKTCGHC 178
+C SC C G CAD DC RG+C +K CR++C C
Sbjct: 607 QCKVSCGVCRPNYVYGPCADYHYDCAAWARRGECLKNKWMPENCRRSCNTC 657
Score = 29.3 bits (64), Expect = 2.9
Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 12/64 (18%)
Frame = +2
Query: 23 DCTLEEVYNK--CPKSCHFCG-------DCADSRPDCDVLKERGDCDKMD---DRVCRKT 166
+C VY C SC C +C+D +C + G+C+K CR +
Sbjct: 477 ECQKNPVYMNVWCKASCRQCTPNYNINEECSDRHTNCAMWSRSGECNKNPLWMSENCRSS 536
Query: 167 CGHC 178
C C
Sbjct: 537 CQKC 540
>sp|P10039|TENA_CHICK Tenascin precursor (TN) (Hexabrachion) (Cytotactin) (Neuronectin)
(GMEM) (JI) (Miotendinous antigen)
(Glioma-associated-extracellular matrix antigen) (GP
150-225)
Length = 1808
Score = 33.9 bits (76), Expect = 0.12
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +2
Query: 14 TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 178
TGEDC CP +CH G C D+ CD DC ++ +C C G C
Sbjct: 276 TGEDCNEP----LCPNNCHNRGRCVDNECVCDEGYTGEDCGEL---ICPNDCFDRGRC 326
Score = 31.6 bits (70), Expect = 0.58
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +2
Query: 14 TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 178
TGEDC +CP CH G C + R CD DC ++ C C G C
Sbjct: 493 TGEDCG----ELRCPNDCHNRGRCVEGRCVCDNGFMGEDCGELS---CPNDCHQHGRC 543
Score = 30.0 bits (66), Expect = 1.7
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 9/48 (18%)
Frame = +2
Query: 17 GEDCTLEEVYNKCPKSCHFCGDCADSR---------PDCDVLKERGDC 133
G+DC+ + +CPK C+ G C D R DC L+ DC
Sbjct: 370 GDDCSQK----RCPKDCNNRGHCVDGRCVCHEGYLGEDCGELRCPNDC 413
Score = 28.9 bits (63), Expect = 3.8
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +2
Query: 17 GEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTCGH 175
GEDC CP CH G C D R C DC +R C C +
Sbjct: 525 GEDCG----ELSCPNDCHQHGRCVDGRCVCHEGFTGEDC---RERSCPNDCNN 570
Score = 27.7 bits (60), Expect = 8.4
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 14 TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCD 109
TGEDC CP C+ G C + R C+
Sbjct: 555 TGEDCR----ERSCPNDCNNVGRCVEGRCVCE 582
>sp|Q09662|YS51_CAEEL Hypothetical protein ZK673.1 in chromosome II precursor
Length = 154
Score = 33.9 bits (76), Expect = 0.12
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 14/56 (25%)
Frame = +2
Query: 53 CPKSCHFCG--------DCADSRPDCDVLKERGDCDKM------DDRVCRKTCGHC 178
CPK+C FCG C DS +C ++ G C + C KTC C
Sbjct: 95 CPKTCGFCGGGSTAAPVQCVDSSTNCANWEKNGFCSSTFYDCANKKQYCAKTCKLC 150
>sp|P22105|TENX_HUMAN Tenascin-X precursor (TN-X) (Hexabrachion-like protein)
Length = 4289
Score = 33.1 bits (74), Expect = 0.20
Identities = 20/53 (37%), Positives = 22/53 (41%)
Frame = +2
Query: 14 TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTCG 172
TGEDC + CP+ C G C D R CD DC R C CG
Sbjct: 302 TGEDCGVRS----CPRGCSQRGRCKDGRCVCDPGYTGEDC---GTRSCPWDCG 347
Score = 31.2 bits (69), Expect = 0.76
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 14 TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDC 133
TGEDC+ CP+ C G C D CD DC
Sbjct: 364 TGEDCSTRT----CPRDCRGRGRCEDGECICDTGYSGDDC 399
Score = 28.5 bits (62), Expect = 4.9
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 12/60 (20%)
Frame = +2
Query: 14 TGEDCTLEEVYNKCPKSCHFCGDCADSR---------PDCDVLKERGDCDK---MDDRVC 157
+GEDC+ CP C G C D R DC V + DC + D VC
Sbjct: 550 SGEDCSTRS----CPGGCRGRGQCLDGRCVCEDGYSGEDCGVRQCPNDCSQHGVCQDGVC 605
Score = 28.5 bits (62), Expect = 4.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 20 EDCTLEEVYNKCPKSCHFCGDCADSRPDCD 109
EDC++ CP +CH G C + R CD
Sbjct: 614 EDCSIRT----CPSNCHGRGRCEEGRCLCD 639
Score = 27.7 bits (60), Expect = 8.4
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +2
Query: 14 TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 178
TG+DC + CP+ C G C + R C+ DC R C + C G C
Sbjct: 271 TGDDCGMRS----CPRGCSQRGRCENGRCVCNPGYTGEDCGV---RSCPRGCSQRGRC 321
Score = 27.7 bits (60), Expect = 8.4
Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Frame = +2
Query: 14 TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 178
TGEDC CP C G C D R C DC R C + C G C
Sbjct: 333 TGEDCGTRS----CPWDCGEGGRCVDGRCVCWPGYTGEDC---STRTCPRDCRGRGRC 383
>sp|P24821|TENA_HUMAN Tenascin precursor (TN) (Hexabrachion) (Cytotactin) (Neuronectin)
(GMEM) (JI) (Miotendinous antigen)
(Glioma-associated-extracellular matrix antigen) (GP
150-225) (Tenascin-C) (TN-C)
Length = 2201
Score = 32.7 bits (73), Expect = 0.26
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 17 GEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC-GH 175
G DC+ + +CP CH G C D R +CD DC ++ C C GH
Sbjct: 369 GLDCSEK----RCPADCHNRGRCVDGRCECDDGFTGADCGELK---CPNGCSGH 415
Score = 32.7 bits (73), Expect = 0.26
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +2
Query: 14 TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 178
TGEDC+ +CP CH G C + + C+ + DC M C C G C
Sbjct: 430 TGEDCS----QLRCPNDCHSRGRCVEGKCVCEQGFKGYDCSDMS---CPNDCHQHGRC 480
Score = 28.9 bits (63), Expect = 3.8
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2
Query: 17 GEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC 169
G +C+ E CP +CH G C D + CD DC ++ C C
Sbjct: 182 GPNCSEPE----CPGNCHLRGRCIDGQCICDDGFTGEDCSQL---ACPSDC 225
Score = 28.9 bits (63), Expect = 3.8
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +2
Query: 14 TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 178
TGEDC CP +CH G C + + CD DC ++ C C G C
Sbjct: 337 TGEDCGKPT----CPHACHTQGRCEEGQCVCDEGFAGLDC---SEKRCPADCHNRGRC 387
Score = 28.5 bits (62), Expect = 4.9
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 9/49 (18%)
Frame = +2
Query: 14 TGEDCTLEEVYNKCPKSCHFCGDCADSR---------PDCDVLKERGDC 133
TGEDC + CP+ C G C D + PDC L DC
Sbjct: 492 TGEDCRDRQ----CPRDCSNRGLCVDGQCVCEDGFTGPDCAELSCPNDC 536
Score = 28.1 bits (61), Expect = 6.4
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +2
Query: 53 CPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTCGH 175
CP CH G C + CD DC DR C + C +
Sbjct: 470 CPNDCHQHGRCVNGMCVCDDGYTGEDC---RDRQCPRDCSN 507
>sp|P54190|TES26_TOXCA 26 kDa secreted antigen precursor (Toxocara excretory-secretory
antigen 26) (TES-26)
Length = 262
Score = 30.8 bits (68), Expect = 0.99
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = +2
Query: 2 CSSKTGEDCTL---EEVYNKCPKSCHFCGDCADSRPDCDV---LKERGDCDKMDDRVCRK 163
C++ G T + + N+C ++C+ C DC D +C L + + + C+K
Sbjct: 30 CAANAGSCFTRPVSQVLQNRCQRTCNTC-DCRDEANNCAASINLCQNPTFEPLVRDRCQK 88
Query: 164 TCGHC 178
TCG C
Sbjct: 89 TCGLC 93
>sp|Q9XTD6|NAS12_CAEEL Zinc metalloproteinase nas-12 precursor (Nematode astacin 12)
Length = 384
Score = 30.8 bits (68), Expect = 0.99
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 5/37 (13%)
Frame = +2
Query: 83 CADSRPDCDVLKERGDC-----DKMDDRVCRKTCGHC 178
C D P CD+ G C D + ++C KTC C
Sbjct: 348 CEDKHPRCDIYSHNGFCTLPFYDDVRYQLCAKTCNLC 384
>sp|P61782|HIS51_METMP Imidazole glycerol phosphate synthase subunit hisH1 (IGP synthase
glutamine amidotransferase subunit) (IGP synthase
subunit hisH1) (ImGP synthase subunit hisH1) (IGPS
subunit hisH1)
Length = 203
Score = 30.8 bits (68), Expect = 0.99
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 5 SSKTGEDCTLEEVYNKCPKSCHFCGDC 85
S KTG DC+L E+ NKC + F G C
Sbjct: 57 SQKTG-DCSLNEIINKCVQKVPFLGIC 82
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,734,515
Number of Sequences: 369166
Number of extensions: 451660
Number of successful extensions: 1852
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1851
length of database: 68,354,980
effective HSP length: 47
effective length of database: 59,672,435
effective search space used: 1670828180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)