Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_N19
(864 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q06155|VAP1_STRPU Vesicle-associated protein (VAP-1) 109 1e-23
sp||Q09666_2 [Segment 2 of 2] Neuroblast differentiation-as... 84 4e-16
sp||Q09666_1 [Segment 1 of 2] Neuroblast differentiation-as... 80 1e-14
sp|Q60754|MTCO_MOUSE Macrophage receptor MARCO (Macrophage ... 47 7e-05
sp|O42350|CO1A2_RANCA Collagen alpha 2(I) chain precursor 46 1e-04
sp|Q61245|COBA1_MOUSE Collagen alpha 1(XI) chain precursor 45 2e-04
sp|Q28083|COBA1_BOVIN Collagen alpha 1(XI) chain precursor 45 2e-04
sp|P12107|CA1B_HUMAN Collagen alpha 1(XI) chain precursor 45 3e-04
sp|Q07563|COHA1_MOUSE Collagen alpha 1(XVII) chain (Bullous... 45 3e-04
sp|P20908|CA15_HUMAN Collagen alpha 1(V) chain precursor 44 4e-04
>sp|Q06155|VAP1_STRPU Vesicle-associated protein (VAP-1)
Length = 433
Score = 109 bits (272), Expect = 1e-23
Identities = 91/298 (30%), Positives = 126/298 (42%), Gaps = 45/298 (15%)
Frame = +3
Query: 33 PKGEIDLD----LNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKLDADFD 200
P G + LD + G LDI D+D+KGPK + GP D+D+ GP D D D
Sbjct: 103 PSGGVGLDVGGGIGGGLGGGLDIDANGPDVDIKGPKVGGDISGP--DLDVSGP--DLDID 158
Query: 201 VDGKKK-KHGIDLGINLPSFGGKVKKPKGEIDLDLNAGADANLDIKKPHVDI-------- 353
VDGKKK K G G+ +P FG KG+ID+D A++DI++P +D+
Sbjct: 159 VDGKKKGKGGFGFGMKMPKFGFG-GHGKGDIDVD------ADVDIERPDLDVSGDADLPS 211
Query: 354 -----DLKGPIGDN-----GFNSKNADIDLKGPKGDIGLKGPKADIDLKGPKLDVDLKGX 503
D+ G IG ++ D+D+KGPK + GP D+D+ GP LD+D+ G
Sbjct: 212 GGVGLDVGGGIGGGLGGGLDIDANGPDVDIKGPKVGGDISGP--DLDVSGPDLDIDVDGK 269
Query: 504 XXXXXXXXXXXXXXXXXXXXXXXXXHG------------------IDLGFNLPSFGAKMK 629
HG I + P G +
Sbjct: 270 KKGKGGFGFGLKIPKFMDPTFGFGGHGKGDIDVDADGGVVIPEGDIKVKTGKPDIGGDVD 329
Query: 630 KPKGEIDLD----LNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDSKGPKGDI 791
P G +DLD + G LDI D+D+KGP G + D+D GP DI
Sbjct: 330 LPSGGVDLDVGGGIGGGLGGGLDIDAKGPDVDIKGP--RVGGDISGPDLDVSGPDLDI 385
Score = 104 bits (260), Expect = 3e-22
Identities = 88/285 (30%), Positives = 127/285 (44%), Gaps = 38/285 (13%)
Frame = +3
Query: 51 LDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGI 230
LD+ G LDI D+D+KGPK + GP D+D+ GP D D D GKK K G
Sbjct: 7 LDVGGGLRGGLDIDAKGPDVDIKGPKVGGDISGP--DLDVSGP--DLDIDGGGKKGKGGF 62
Query: 231 DLGINLPSFGGKVKKPKGEIDLDLNAGADANLDIKKPHVDI-------------DLKGPI 371
G+ +P FG KG+ID+ DA++DI++P +D+ D+ G I
Sbjct: 63 GFGLKMPKFGFG-GHGKGDIDV------DADVDIERPDLDVSGDADLPSGGVGLDVGGGI 115
Query: 372 GDN-----GFNSKNADIDLKGPKGDIGLKGPKADIDLKGPKLDVDLKGXXXXXXXXXXXX 536
G ++ D+D+KGPK + GP D+D+ GP LD+D+ G
Sbjct: 116 GGGLGGGLDIDANGPDVDIKGPKVGGDISGP--DLDVSGPDLDIDVDGKKKGKG------ 167
Query: 537 XXXXXXXXXXXXXXHGIDLGFNLPSFGAKMKKPKGEIDLDLNAGADANLDIKKPHVDI-- 710
G G +P FG KG+ID+ DA++DI++P +D+
Sbjct: 168 ---------------GFGFGMKMPKFGFG-GHGKGDIDV------DADVDIERPDLDVSG 205
Query: 711 -----------DLKGPIGDN-----GFNSKNADIDSKGPK--GDI 791
D+ G IG ++ D+D KGPK GDI
Sbjct: 206 DADLPSGGVGLDVGGGIGGGLGGGLDIDANGPDVDIKGPKVGGDI 250
Score = 95.9 bits (237), Expect = 1e-19
Identities = 78/256 (30%), Positives = 114/256 (44%), Gaps = 30/256 (11%)
Frame = +3
Query: 33 PKGEIDLD----LNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKLDADFD 200
P G + LD + G LDI D+D+KGPK + GP D+D+ GP D D D
Sbjct: 210 PSGGVGLDVGGGIGGGLGGGLDIDANGPDVDIKGPKVGGDISGP--DLDVSGP--DLDID 265
Query: 201 VDGKKK-KHGIDLGINLPSF----GGKVKKPKGEIDLDLNAGA----------------D 317
VDGKKK K G G+ +P F G KG+ID+D + G
Sbjct: 266 VDGKKKGKGGFGFGLKIPKFMDPTFGFGGHGKGDIDVDADGGVVIPEGDIKVKTGKPDIG 325
Query: 318 ANLDIKKPHVDIDLKGPIGDN-----GFNSKNADIDLKGPKGDIGLKGPKADIDLKGPKL 482
++D+ VD+D+ G IG ++K D+D+KGP+ + GP D+D+ GP L
Sbjct: 326 GDVDLPSGGVDLDVGGGIGGGLGGGLDIDAKGPDVDIKGPRVGGDISGP--DLDVSGPDL 383
Query: 483 DVDLKGXXXXXXXXXXXXXXXXXXXXXXXXXXHGIDLGFNLPSFGAKMKKPKGEIDLDLN 662
D+D G G G +P FG KG+ID+
Sbjct: 384 DIDGDGKKKGKG---------------------GFGFGLKMPKFGFG-GHGKGDIDV--- 418
Query: 663 AGADANLDIKKPHVDI 710
DA++DI++P +++
Sbjct: 419 ---DADVDIERPDLNV 431
Score = 52.0 bits (123), Expect = 2e-06
Identities = 50/173 (28%), Positives = 70/173 (40%), Gaps = 27/173 (15%)
Frame = +3
Query: 354 DLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKA-------DIDLKGPKLDVDLKGXXXX 512
D+ G + G DID KGP D+ +KGPK D+D+ GP LD+D G
Sbjct: 2 DIGGGLDVGGGLRGGLDIDAKGP--DVDIKGPKVGGDISGPDLDVSGPDLDIDGGGKKGK 59
Query: 513 XXXXXXXXXXXXXXXXXXXXXXHGIDLGFNLPSFGAKMKKPKGEIDLDLNAGADANLDIK 692
G G +P FG KG+ID+ DA++DI+
Sbjct: 60 G----------------------GFGFGLKMPKFGFG-GHGKGDIDV------DADVDIE 90
Query: 693 KPHVDI-------------DLKGPIGDN-----GFNSKNADIDSKGPK--GDI 791
+P +D+ D+ G IG ++ D+D KGPK GDI
Sbjct: 91 RPDLDVSGDADLPSGGVGLDVGGGIGGGLGGGLDIDANGPDVDIKGPKVGGDI 143
Score = 30.4 bits (67), Expect = 6.7
Identities = 23/71 (32%), Positives = 33/71 (46%)
Frame = +3
Query: 582 GIDLGFNLPSFGAKMKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNAD 761
G+D+G L +G +D+D ++DIK P V D+ GP D + + D
Sbjct: 6 GLDVGGGL----------RGGLDIDAKG---PDVDIKGPKVGGDISGP--DLDVSGPDLD 50
Query: 762 IDSKGPKGDIG 794
ID G KG G
Sbjct: 51 IDGGGKKGKGG 61
>sp||Q09666_2 [Segment 2 of 2] Neuroblast differentiation-associated protein
AHNAK (Desmoyokin)
Length = 1277
Score = 84.3 bits (207), Expect = 4e-16
Identities = 88/288 (30%), Positives = 123/288 (42%), Gaps = 57/288 (19%)
Frame = +3
Query: 96 PHVDIDLKGPKGDIGLKGPKADID------------LKGPKLD-ADFDVDGKKKKHGIDL 236
P V+ DLKGP+ DI KGPK DI+ LK PK+ F + G K + G D+
Sbjct: 3 PKVEGDLKGPEADI--KGPKVDINTPDVDVHGPDWHLKMPKVKMPKFSMPGFKGE-GPDV 59
Query: 237 GINLPSFGGKVKKPKGEIDL-DLN-AGADANL---------------DIKKPHVDIDLKG 365
+NLP V PK ++D+ D+N G DA L I P +D++LKG
Sbjct: 60 DVNLPKADIDVSGPKVDVDVPDVNIEGPDAKLKGPKFKMPEMSIKAPKISMPDIDLNLKG 119
Query: 366 PIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGPKLDVDLKG-XXXXXXXXXXXXXX 542
P D+D+ PK + LKGP+ADI KGPK+D++
Sbjct: 120 P-------KVKGDVDVTLPKVEGDLKGPEADI--KGPKVDINTPDVDVHGPDWHLKMPKV 170
Query: 543 XXXXXXXXXXXXHGIDLGFNLPSFGAKMKKPKGEIDL-DLN-AGADANLDIKK------- 695
G D+ +LP + PK ++D+ D+N G D L + K
Sbjct: 171 KMPKFSMPGFKGEGPDVDVSLPKADIDVSGPKVDVDIPDVNIEGPDPKLKVPKVKMPEIN 230
Query: 696 --------PHVDIDLKGPIGDNGFN---------SKNADIDSKGPKGD 788
P VD+DLKGP F+ K ++D KGP+ D
Sbjct: 231 IKAPKISIPDVDLDLKGPKVKGDFDVSVPKVEGTLKGPEVDLKGPRLD 278
Score = 79.7 bits (195), Expect = 1e-14
Identities = 84/304 (27%), Positives = 128/304 (42%), Gaps = 50/304 (16%)
Frame = +3
Query: 21 KGKKPKGEIDLDLNAGADANLDIKKPHVDID-----LKGPKGDIGLKGPK---ADIDLKG 176
KG+ P D+D+N A++D+ P VD+D ++GP D LKGPK ++ +K
Sbjct: 53 KGEGP----DVDVNL-PKADIDVSGPKVDVDVPDVNIEGP--DAKLKGPKFKMPEMSIKA 105
Query: 177 PKL---DADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDLDLNAGADANLDIKKPHV 347
PK+ D D ++ G K K +D + LP G +K P+ +I +DI P V
Sbjct: 106 PKISMPDIDLNLKGPKVKGDVD--VTLPKVEGDLKGPEADIK-------GPKVDINTPDV 156
Query: 348 DID-----LKGP------IGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGPKLDVDL 494
D+ LK P GF + D+D+ PK DI + GPK D+D+ DV++
Sbjct: 157 DVHGPDWHLKMPKVKMPKFSMPGFKGEGPDVDVSLPKADIDVSGPKVDVDIP----DVNI 212
Query: 495 KGXXXXXXXXXXXXXXXXXXXXXXXXXXHGIDL---------GFNLPSFGAKMKKPKGEI 647
+G +DL ++P +K P+ ++
Sbjct: 213 EGPDPKLKVPKVKMPEINIKAPKISIPDVDLDLKGPKVKGDFDVSVPKVEGTLKGPEVDL 272
Query: 648 D---LDLNAGADANLD---------------IKKPHVDIDLKGP-IGDNGFNSKNADIDS 770
LD G DA L + P VD+ LK P IG +G + ++D
Sbjct: 273 KGPRLDFE-GPDAKLSGPSLKMPSLEISAPKVTAPDVDLHLKAPKIGFSGPKLEGGEVDL 331
Query: 771 KGPK 782
KGPK
Sbjct: 332 KGPK 335
Score = 73.9 bits (180), Expect = 5e-13
Identities = 76/281 (27%), Positives = 115/281 (40%), Gaps = 42/281 (14%)
Frame = +3
Query: 66 GADANLDIKKPHVDIDLKGPKGDIG------------LKGPKA---DIDLKGPKL---DA 191
G ++D+ P DID+ GPK D+ LK PK +I++K PK+ D
Sbjct: 182 GEGPDVDVSLPKADIDVSGPKVDVDIPDVNIEGPDPKLKVPKVKMPEINIKAPKISIPDV 241
Query: 192 DFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEID---LDLNAGADANLD----------- 329
D D+ G K K D +++P G +K P+ ++ LD G DA L
Sbjct: 242 DLDLKGPKVKGDFD--VSVPKVEGTLKGPEVDLKGPRLDFE-GPDAKLSGPSLKMPSLEI 298
Query: 330 ----IKKPHVDIDLKGP-IGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGPKLDVDL 494
+ P VD+ LK P IG +G + ++DLKGPK ++ P D+ + P D+++
Sbjct: 299 SAPKVTAPDVDLHLKAPKIGFSGPKLEGGEVDLKGPK----VEAPSLDVHMDSP--DINI 352
Query: 495 KGXXXXXXXXXXXXXXXXXXXXXXXXXXHGIDLGFNLPSFGAKMKKPKGEIDLDLNAGAD 674
+G F P FG K PK +I
Sbjct: 353 EGPDVKIPK-------------------------FKKPKFGFGPKSPKADI-------KS 380
Query: 675 ANLDIKKPHVDIDLKGP---IGDNGFNS--KNADIDSKGPK 782
+LD+ P +++L+ P +G G S K I GPK
Sbjct: 381 PSLDVTVPEAELNLETPEISVGGKGKKSKFKMPKIHMSGPK 421
Score = 65.1 bits (157), Expect = 2e-10
Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 19/158 (12%)
Frame = +3
Query: 66 GADANLDIKKPHVDIDLKGPKGDIGLKG-----PKADIDLKGPKLDADFDVDGKKKKHGI 230
G+D +++ K P V +LKGP D+ LKG P D +L+GPK+ G+ K G
Sbjct: 804 GSDLHVNAKGPQVSGELKGPGVDVNLKGSRISAPNVDFNLEGPKVKGSLGATGEIK--GP 861
Query: 231 DLGINLPSFGGKVKKPKGEIDLD--LNAGADANL----------DIKKPHVDIDLKGPIG 374
+G LP G V+ +G + + ++G D NL I P + LKG
Sbjct: 862 TVGGGLPGIG--VQGLEGNLQMPGIKSSGCDVNLPGVNVKLPTGQISGPEIKGGLKG--S 917
Query: 375 DNGFNSKNADIDLKGPKGDIGLKGPKAD--IDLKGPKL 482
+ GF+ DI +KGP + P++D I+LKGPK+
Sbjct: 918 EVGFHGAAPDISVKGPA--FNMASPESDFGINLKGPKI 953
Score = 64.3 bits (155), Expect = 4e-10
Identities = 75/280 (26%), Positives = 103/280 (36%), Gaps = 48/280 (17%)
Frame = +3
Query: 84 DIKKPHVDIDLKGPKGDIG--------LKGPKADIDLKGPKLDADFDVDGKKKKHGIDLG 239
D+K D+ LKGP D+ + GP D++LKGP L D D K G
Sbjct: 657 DVKLEGPDVSLKGPGVDLPSVNLSMPKVSGPDLDLNLKGPSLKGDLDASVPSMKVHAP-G 715
Query: 240 INLPSFGGK-------VKKPKGEIDLDLNAGA-DANLDIKKPHVDIDLKGPIGDNGFNSK 395
+NL GGK VK P + LN GA D L D+ + G I +
Sbjct: 716 LNLSGVGGKMQVGGDGVKVPGIDATTKLNVGAPDVTLRGPSLQGDLAVSGDIKCPKVSVG 775
Query: 396 NADIDLKGPKGDIGL---------------------KGPKADIDLKGPKLDVDLKG-XXX 509
D+ L+ +G I L KGP+ +LKGP +DV+LKG
Sbjct: 776 APDLSLEASEGSIKLPKMKLPQFGISTPGSDLHVNAKGPQVSGELKGPGVDVNLKGSRIS 835
Query: 510 XXXXXXXXXXXXXXXXXXXXXXXHGIDLGFNLPSFGAKMKKPKGEIDLDLNAGADANL-- 683
G +G LP G + + ++ ++G D NL
Sbjct: 836 APNVDFNLEGPKVKGSLGATGEIKGPTVGGGLPGIGVQGLEGNLQMPGIKSSGCDVNLPG 895
Query: 684 --------DIKKPHVDIDLKGPIGDNGFNSKNADIDSKGP 779
I P + LKG + GF+ DI KGP
Sbjct: 896 VNVKLPTGQISGPEIKGGLKG--SEVGFHGAAPDISVKGP 933
Score = 63.9 bits (154), Expect = 5e-10
Identities = 67/269 (24%), Positives = 106/269 (39%), Gaps = 12/269 (4%)
Frame = +3
Query: 21 KGKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKLDADFD 200
KGKK K ++ +G + KK D+++ G + D LK P D+++ GP D
Sbjct: 404 KGKKSKFKMPKIHMSGP--KIKAKKQGFDLNVPGGEIDASLKAPDVDVNIAGPDAALKVD 461
Query: 201 VDGKKKKH---------GIDLGINLPSFGGKVKKPKGEIDLDLNAGADANLDIKKPHV-- 347
V K K ++ I P F + P +++ +L A D L + HV
Sbjct: 462 VKSPKTKKTMFGKMYFPDVEFDIKSPKFKAEAPLPSPKLEGELQA-PDLELSLPAIHVEG 520
Query: 348 -DIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGPKLDVDLKGXXXXXXXX 524
DI K P K D+D+ PK + LKGPK +L P ++++
Sbjct: 521 LDIKAKAP------KVKMPDVDISVPKIEGDLKGPKVQANLGAPDINIE----------- 563
Query: 525 XXXXXXXXXXXXXXXXXXHGIDLGFNLPSFGAKMKKPKGEIDLDLNAGADANLDIKKPHV 704
G+D PSFG + P+ I D N+++K P +
Sbjct: 564 -------------------GLDAKVKTPSFG--ISAPQVSI-------PDVNVNLKGPKI 595
Query: 705 DIDLKGPIGDNGFNSKNADIDSKGPKGDI 791
KG + G + D+D +GP+ I
Sbjct: 596 ----KGDVPSVGL--EGPDVDLQGPEAKI 618
Score = 63.2 bits (152), Expect = 9e-10
Identities = 75/291 (25%), Positives = 120/291 (41%), Gaps = 37/291 (12%)
Frame = +3
Query: 21 KGKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKA-------------- 158
KG KG++D + ++ + P +++ G K +G G K
Sbjct: 694 KGPSLKGDLDASV-----PSMKVHAPGLNLSGVGGKMQVGGDGVKVPGIDATTKLNVGAP 748
Query: 159 DIDLKGPKLDADFDVDGKKKKHGIDLG---INLPSFGGKVKKPKGEI----------DLD 299
D+ L+GP L D V G K + +G ++L + G +K PK ++ DL
Sbjct: 749 DVTLRGPSLQGDLAVSGDIKCPKVSVGAPDLSLEASEGSIKLPKMKLPQFGISTPGSDLH 808
Query: 300 LNA-GADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPK--GDIGLKGPKADIDLK 470
+NA G + ++K P VD++LKG + ++ N D +L+GPK G +G G ++K
Sbjct: 809 VNAKGPQVSGELKGPGVDVNLKG----SRISAPNVDFNLEGPKVKGSLGATG-----EIK 859
Query: 471 GPKLDVDLKGXXXXXXXXXXXXXXXXXXXXXXXXXXHGIDLGFNLPSFGAKMKKPKGEID 650
GP + L G G D+ NLP G +K P G+I
Sbjct: 860 GPTVGGGLPGIGVQGLEGNLQMPGIKSS---------GCDV--NLP--GVNVKLPTGQI- 905
Query: 651 LDLNAGADANLDIKKPHV-------DIDLKGPIGDNGFNSKNADIDSKGPK 782
+G + +K V DI +KGP + + I+ KGPK
Sbjct: 906 ----SGPEIKGGLKGSEVGFHGAAPDISVKGPAFNMASPESDFGINLKGPK 952
Score = 41.6 bits (96), Expect = 0.003
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Frame = +3
Query: 105 DIDLKGPKGDIGLKGPKAD--IDLKGPKLDADFDVDGKKKKHGIDLG---INLPSFGGKV 269
DI +KGP + P++D I+LKGPK+ DV G I LG +++ GG+
Sbjct: 927 DISVKGPA--FNMASPESDFGINLKGPKIKGGADVSGGVSAPDISLGEGHLSVKGSGGEW 984
Query: 270 KKPKGEIDLDLNAGADA-NLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDI 434
K P+ L+L+ A L P V+ +KG G G + + + GP+G +
Sbjct: 985 KGPQVSSALNLDTSKFAGGLHFSGPKVEGGVKG--GQIGLQAPG--LSVSGPQGHL 1036
Score = 30.0 bits (66), Expect = 8.7
Identities = 42/155 (27%), Positives = 60/155 (38%), Gaps = 21/155 (13%)
Frame = +3
Query: 78 NLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSF 257
NLD K + GPK + G+KG I L+ P L V G + +L S
Sbjct: 994 NLDTSKFAGGLHFSGPKVEGGVKG--GQIGLQAPGL----SVSGPQG--------HLESG 1039
Query: 258 GGKVKKPKGEIDLDLNA-----GADANLDIKKPHVDIDLKGPIGDNGFNS---------- 392
GKV PK +I + G + +D+ P + ++ GD +
Sbjct: 1040 SGKVTFPKMKIPKFTFSGRELVGREMGVDVHFPKAEASIQAGAGDGEWEESEVKLKKSKI 1099
Query: 393 KNADIDLKGPKGDIGLKG-PKADI-----DLKGPK 479
K + PKG G+ G P+A I DLK K
Sbjct: 1100 KMPKFNFSKPKGKGGVTGSPEASISGSKGDLKSSK 1134
>sp||Q09666_1 [Segment 1 of 2] Neuroblast differentiation-associated protein AHNAK
(Desmoyokin)
Length = 1683
Score = 79.7 bits (195), Expect = 1e-14
Identities = 91/334 (27%), Positives = 137/334 (41%), Gaps = 77/334 (23%)
Frame = +3
Query: 21 KGKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDI--------------------- 137
KG K KG++D+ L + ++K P D+D+KGPK DI
Sbjct: 1086 KGPKLKGDVDVSL---PEVEGEMKVP--DVDIKGPKVDISAPDVDVHGPDWHLKMPKVKM 1140
Query: 138 ------GLKG---------PKADIDLKGPKLDA---DFDVDG--------KKKKHGIDLG 239
G KG PKAD+D+ GPK+DA D +++G K K + +
Sbjct: 1141 PKFSMPGFKGEGPEVDVKLPKADVDVSGPKMDAEVPDVNIEGPDAKLKGPKFKMPEMSIK 1200
Query: 240 ---INLPSFGGKVKKPKGEIDLDLNAGA------DANLDIKKPHVDI-----DLKGP--- 368
I++P G +K PK + D D+ ++DIK P VDI ++ GP
Sbjct: 1201 PQKISIPDVGLHLKGPKMKGDYDVTVPKVEGEIKAPDVDIKGPKVDINAPDVEVHGPDWH 1260
Query: 369 ----------IGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGPKLDV---DLKGXXX 509
GF + ++D+ PK D+G+ GPK DID+ L+ LKG
Sbjct: 1261 LKMPKVKMPKFSMPGFKGEGPEVDMNLPKADLGVSGPKVDIDVPDVNLEAPEGKLKG--- 1317
Query: 510 XXXXXXXXXXXXXXXXXXXXXXXHGIDLGFNLPSFGAKMKKPKGEIDLDLNAGADANLDI 689
H I ++P G +K PK + D+D++ D+
Sbjct: 1318 -----------PKFKMPSMNIQTHKI----SMPDVGLNLKAPKLKTDVDVSL-PKVEGDL 1361
Query: 690 KKPHVDIDLKGPIGDNGFNSKNADIDSKGPKGDI 791
K P +ID+K P D DID +GP+G +
Sbjct: 1362 KGP--EIDVKAPKMDVNV----GDIDIEGPEGKL 1389
Score = 74.3 bits (181), Expect = 4e-13
Identities = 78/272 (28%), Positives = 117/272 (43%), Gaps = 37/272 (13%)
Frame = +3
Query: 87 IKKPHVDIDLKGPK--GDIGLKGPKADIDLKGPKLDADF-DVDGKKKKHGIDLG-INLPS 254
I P VD+ +KGPK G+ + PK + DLKGPK+D DV+ + + + I +P
Sbjct: 699 ISMPDVDLHMKGPKVKGEYDMTVPKLEGDLKGPKVDVSAPDVEMQGPDWNLKMPKIKMPK 758
Query: 255 FGGKVKKPKG-EIDLDLNAGADANLDIKKPHVD-----IDLKGPIGD------------- 377
F K +G E D++L+ AN+DI P VD + L+GP G
Sbjct: 759 FSMPSLKGEGPEFDVNLSK---ANVDISAPKVDTNAPDLSLEGPEGKLKGPKFKMPEMHF 815
Query: 378 --NGFNSKNADIDLKGPK--GDIGLKGPKA-------DIDLKGPKLDV---DLKGXXXXX 515
+ + D+DLKGPK G++ + PK D+D++GPK+D+ D++G
Sbjct: 816 RAPKMSLPDVDLDLKGPKMKGNVDISAPKIEGEMQVPDVDIRGPKVDIKAPDVEG----- 870
Query: 516 XXXXXXXXXXXXXXXXXXXXXHGIDLGFNLPSFGAKMKKPKGEIDLDLNAGADANLDIKK 695
G+D +P KMK PK + +L +
Sbjct: 871 ---------------------QGLDWSLKIP----KMKMPKFSMP---------SLKGEG 896
Query: 696 PHVDIDLKGPIGDNGFNSKNADIDSKGPKGDI 791
P VD++L AD+D GPK DI
Sbjct: 897 PEVDVNLP-----------KADVDVSGPKVDI 917
Score = 73.9 bits (180), Expect = 5e-13
Identities = 82/305 (26%), Positives = 129/305 (42%), Gaps = 48/305 (15%)
Frame = +3
Query: 21 KGKKPKGEIDLDLNAGADANLDIKKPHVDID-----LKGPKGDIGLKGPK---ADIDLKG 176
KG+ P E+D++L A++D+ P VDI+ L+GP+G LKGPK ++ K
Sbjct: 893 KGEGP--EVDVNL---PKADVDVSGPKVDIEAPDVSLEGPEGK--LKGPKFKMPEMHFKT 945
Query: 177 PKL---DADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDLDLNAGADANLDIKKPHV 347
PK+ D D + G K K +D +++P G++K P EI +DI P
Sbjct: 946 PKISMPDVDLHLKGPKVKGDVD--VSVPKVEGEMKVPDVEIK-------GPKMDIDAP-- 994
Query: 348 DIDLKGP-------------IGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGPKLDV 488
D++++GP GF + ++D+ PK DI + GPK D+++ DV
Sbjct: 995 DVEVQGPDWHLKMPKMKMPKFSMPGFKGEGREVDVNLPKADIDVSGPKVDVEVP----DV 1050
Query: 489 DLKGXXXXXXXXXXXXXXXXXXXXXXXXXXHGIDLGFNLPSFGAKMKKP--KGEIDLDL- 659
L+G H ++P +K P KG++D+ L
Sbjct: 1051 SLEG-----------PEGKLKGPKFKMPEMHFKAPKISMPDVDLNLKGPKLKGDVDVSLP 1099
Query: 660 ---NAGADANLDIKKPHVDI-----DLKGP-------------IGDNGFNSKNADIDSKG 776
++DIK P VDI D+ GP GF + ++D K
Sbjct: 1100 EVEGEMKVPDVDIKGPKVDISAPDVDVHGPDWHLKMPKVKMPKFSMPGFKGEGPEVDVKL 1159
Query: 777 PKGDI 791
PK D+
Sbjct: 1160 PKADV 1164
Score = 72.0 bits (175), Expect = 2e-12
Identities = 79/278 (28%), Positives = 121/278 (43%), Gaps = 21/278 (7%)
Frame = +3
Query: 21 KGKKPKGEIDLDLNAGADANLDIKKPHVD-----IDLKGPKGDIGLKGPK---ADIDLKG 176
KG+ P+ +++L + AN+DI P VD + L+GP+G LKGPK ++ +
Sbjct: 765 KGEGPEFDVNL-----SKANVDISAPKVDTNAPDLSLEGPEGK--LKGPKFKMPEMHFRA 817
Query: 177 PKL---DADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDLDLNAGADANLDIKKPHV 347
PK+ D D D+ G K K +D I+ P G+++ P D+D+ +DIK P V
Sbjct: 818 PKMSLPDVDLDLKGPKMKGNVD--ISAPKIEGEMQVP----DVDIRG---PKVDIKAPDV 868
Query: 348 -----DIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGPKLDVDLKGXXXX 512
D LK P K + LKG ++ + PKAD+D+ GPK+D++
Sbjct: 869 EGQGLDWSLKIP---KMKMPKFSMPSLKGEGPEVDVNLPKADVDVSGPKVDIEAP----- 920
Query: 513 XXXXXXXXXXXXXXXXXXXXXXHGIDLGFNLPS---FGAKMKKPKGEIDLDLNAGADANL 683
D+ P G K K P+ + D +L
Sbjct: 921 -------------------------DVSLEGPEGKLKGPKFKMPEMHFKTPKISMPDVDL 955
Query: 684 DIKKPHV--DIDLKGPIGDNGFNSKNADIDSKGPKGDI 791
+K P V D+D+ P + K D++ KGPK DI
Sbjct: 956 HLKGPKVKGDVDVSVPKVEG--EMKVPDVEIKGPKMDI 991
Score = 72.0 bits (175), Expect = 2e-12
Identities = 81/267 (30%), Positives = 117/267 (43%), Gaps = 36/267 (13%)
Frame = +3
Query: 87 IKKPHVDIDLKGPK--GDIGLKGPKA-------DIDLKGPKLDADF-DVDGKKKKHGIDL 236
I P VD+ LKGPK GD+ + PK D+D+KGPK+D D DV+ H D
Sbjct: 1406 ISMPDVDLHLKGPKVKGDMDVSVPKVEGEMKVPDVDIKGPKVDIDAPDVE----VHDPDW 1461
Query: 237 GINLPSFGGKVKKPK----------GEIDLDLNAGADANLDIKKPHVD-----IDLKGPI 371
+ +P K+K PK E+D++L A++D+ P VD +D++GP
Sbjct: 1462 HLKMP----KMKMPKFSMPGFKAEGPEVDVNLRK---ADIDVSGPSVDTDAPDLDIEGPE 1514
Query: 372 GD-NGFNSKNADIDLKGPKG-----DIGLKGPK--ADIDLKGPKLDVDLKGXXXXXXXXX 527
G G K +++K PK D+ LKGPK +ID P+L+ DL+G
Sbjct: 1515 GKLKGSKFKMPKLNIKAPKVSMPDVDLNLKGPKLKGEIDASVPELEGDLRGPQVDVKGPL 1574
Query: 528 XXXXXXXXXXXXXXXXXHGIDLGFNLPSFGAKMKKPKGEI-DLDLNAGADANLDIKKPHV 704
D+ P AK+K PK ++ ++ A I P V
Sbjct: 1575 VEAEVP--------------DVDLECPD--AKLKGPKFKMPEMHFKAP-----KISMPDV 1613
Query: 705 DIDLKGP--IGDNGFNSKNADIDSKGP 779
D+ LKGP GD + + D GP
Sbjct: 1614 DLHLKGPKVKGDADVSVPKLEGDLTGP 1640
Score = 68.9 bits (167), Expect = 2e-11
Identities = 86/346 (24%), Positives = 128/346 (36%), Gaps = 110/346 (31%)
Frame = +3
Query: 87 IKKPHVDIDLKGPK--GDIGLKGPKA-------DIDLKGPKLDAD---FDVDGKK----- 215
I P VD+ LKGPK GD+ + PK D+++KGPK+D D +V G
Sbjct: 948 ISMPDVDLHLKGPKVKGDVDVSVPKVEGEMKVPDVEIKGPKMDIDAPDVEVQGPDWHLKM 1007
Query: 216 -------------KKHGIDLGINLPSFGGKVKKPKGEIDL-DLNA-GADANLD------- 329
K G ++ +NLP V PK ++++ D++ G + L
Sbjct: 1008 PKMKMPKFSMPGFKGEGREVDVNLPKADIDVSGPKVDVEVPDVSLEGPEGKLKGPKFKMP 1067
Query: 330 --------IKKPHVDIDLKGPI--GDNGFN-------SKNADIDLKGPKGDI-------- 434
I P VD++LKGP GD + K D+D+KGPK DI
Sbjct: 1068 EMHFKAPKISMPDVDLNLKGPKLKGDVDVSLPEVEGEMKVPDVDIKGPKVDISAPDVDVH 1127
Query: 435 -------------------GLKGPKADIDLKGPKLDVDLKGXXXXXXXXXXXXXXXXXXX 557
G KG ++D+K PK DVD+ G
Sbjct: 1128 GPDWHLKMPKVKMPKFSMPGFKGEGPEVDVKLPKADVDVSGPKMDAEVPDVNIEGPDAKL 1187
Query: 558 XXXXXXXHGIDL---GFNLPSFGAKMKKPKGEIDLDLNAG------ADANLDIKKPHVDI 710
+ + ++P G +K PK + D D+ ++DIK P VDI
Sbjct: 1188 KGPKFKMPEMSIKPQKISIPDVGLHLKGPKMKGDYDVTVPKVEGEIKAPDVDIKGPKVDI 1247
Query: 711 -----DLKGP-------------IGDNGFNSKNADIDSKGPKGDIG 794
++ GP GF + ++D PK D+G
Sbjct: 1248 NAPDVEVHGPDWHLKMPKVKMPKFSMPGFKGEGPEVDMNLPKADLG 1293
Score = 66.2 bits (160), Expect = 1e-10
Identities = 70/253 (27%), Positives = 108/253 (42%), Gaps = 18/253 (7%)
Frame = +3
Query: 87 IKKPHVDIDLKGPK--GDIGLKGPKADIDLKGPKLDADF-DVDGKKKKHGIDLGINLPSF 257
I P VD+ +KG K G+ + PK + +LKGPK+D D DVD HG D + +P
Sbjct: 450 ISMPDVDLHVKGTKVKGEYDVTVPKLEGELKGPKVDIDAPDVD----VHGPDWHLKMP-- 503
Query: 258 GGKVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPIGD---NGFNSKNADIDLKGPK- 425
K+K PK + G + +D+ P D+D+ GP D + + + LKGPK
Sbjct: 504 --KMKMPKFSVPGFKAEGPE--VDVNLPKADVDISGPKIDVTAPDVSIEEPEGKLKGPKF 559
Query: 426 --GDIGLKGPK-----ADIDLKGPKL----DVDLKGXXXXXXXXXXXXXXXXXXXXXXXX 572
++ +K PK D+ LKGP + DV +
Sbjct: 560 KMPEMNIKVPKISMPDVDLHLKGPNVKGEYDVTMPKVESEIKVPDVELKSAKMDIDVPDV 619
Query: 573 XXHGIDLGFNLPSFGAKMKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSK 752
G D +P KMK PK + G + +D+ P D+D+ GP +
Sbjct: 620 EVQGPDWHLKMP----KMKMPKFSMPGFKAEGPE--VDVNLPKADVDISGP----KVGVE 669
Query: 753 NADIDSKGPKGDI 791
D++ +GP+G +
Sbjct: 670 VPDVNIEGPEGKL 682
Score = 64.7 bits (156), Expect = 3e-10
Identities = 83/302 (27%), Positives = 123/302 (40%), Gaps = 48/302 (15%)
Frame = +3
Query: 21 KGKKPKGEIDLDLNAGADANLDIKKPHV--DIDLKGPKGDIGLKGPKADIDLKGPKLDA- 191
K K P I + D L++K P + D+D+ PK + LKGP +ID+K PK+D
Sbjct: 1319 KFKMPSMNIQTHKISMPDVGLNLKAPKLKTDVDVSLPKVEGDLKGP--EIDVKAPKMDVN 1376
Query: 192 --DFDVDGKKKK-----------HGIDLGINLPSFGGKVKKPKGEIDLDLNAGADA---- 320
D D++G + K H I++P +K PK + D+D++
Sbjct: 1377 VGDIDIEGPEGKLKGPKFKMPEMHFKAPKISMPDVDLHLKGPKVKGDMDVSVPKVEGEMK 1436
Query: 321 --NLDIKKPHVDID------------LKGP------IGDNGFNSKNADIDLKGPKGDIGL 440
++DIK P VDID LK P GF ++ ++D+ K DI +
Sbjct: 1437 VPDVDIKGPKVDIDAPDVEVHDPDWHLKMPKMKMPKFSMPGFKAEGPEVDVNLRKADIDV 1496
Query: 441 KGPKADIDLKGPKLDVD-----LKGXXXXXXXXXXXXXXXXXXXXXXXXXXHGIDLGFNL 605
GP D D P LD++ LKG D+ NL
Sbjct: 1497 SGPSVDTD--APDLDIEGPEGKLKGSKFKMPKLNIKAPKVSMP-----------DVDLNL 1543
Query: 606 PSFGAKMKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPIGD---NGFNSKNADIDSKG 776
K K KGEID + + D++ P VD+ KGP+ + + + D KG
Sbjct: 1544 -----KGPKLKGEIDASV---PELEGDLRGPQVDV--KGPLVEAEVPDVDLECPDAKLKG 1593
Query: 777 PK 782
PK
Sbjct: 1594 PK 1595
Score = 63.5 bits (153), Expect = 7e-10
Identities = 82/307 (26%), Positives = 131/307 (42%), Gaps = 52/307 (16%)
Frame = +3
Query: 27 KKPKGEI-DLDLNAGAD---ANLDIKKPHVDIDLKGPKGDIGLKGPKADID-------LK 173
+KPK + D+DL+ G+ ++ + P V D+KGP+ + LKG + DI+ L
Sbjct: 249 QKPKISMQDVDLSLGSPKLKGDIKVSAPGVQGDVKGPQ--VALKGSRVDIETPNLEGTLT 306
Query: 174 GPKL---------------DADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEI---DLD 299
GP+L + D +V K K G+D + LP GKVK P+ ++ +D
Sbjct: 307 GPRLGSPSGKTGTCRISMSEVDLNVAAPKVKGGVD--VTLPRVEGKVKVPEVDVRGPKVD 364
Query: 300 LNA------GADANLDIKKPHVDIDLKGP-IGDNGFNSKNADIDLKGPKGDIGLKGPKA- 455
++A G + NL + K +K P G + D+ + PKGDI + GPK
Sbjct: 365 VSAPDVEAHGPEWNLKMPK------MKMPTFSTPGAKGEGPDVHMTLPKGDISISGPKVN 418
Query: 456 ----DIDLKGPKLDVDLKGXXXXXXXXXXXXXXXXXXXXXXXXXXHGI--DLGFNLPSFG 617
D++L+G L LKG + + +P
Sbjct: 419 VEAPDVNLEG--LGGKLKGPDVKLPDMSVKTPKISMPDVDLHVKGTKVKGEYDVTVPKLE 476
Query: 618 AKMKKPKGEI---DLDLNAGADANLDIKKPHV------DIDLKGPIGDNGFNSKNADIDS 770
++K PK +I D+D++ G D +L + K + +GP D N AD+D
Sbjct: 477 GELKGPKVDIDAPDVDVH-GPDWHLKMPKMKMPKFSVPGFKAEGPEVD--VNLPKADVDI 533
Query: 771 KGPKGDI 791
GPK D+
Sbjct: 534 SGPKIDV 540
Score = 63.2 bits (152), Expect = 9e-10
Identities = 54/177 (30%), Positives = 92/177 (51%), Gaps = 20/177 (11%)
Frame = +3
Query: 24 GKKPKG-EIDLDLNAGADANLDIKKPHVD-----IDLKGPKGDI-GLKGPKADIDLKGPK 182
G K +G E+D++L A++D+ P VD +D++GP+G + G K +++K PK
Sbjct: 1477 GFKAEGPEVDVNLRK---ADIDVSGPSVDTDAPDLDIEGPEGKLKGSKFKMPKLNIKAPK 1533
Query: 183 L---DADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDLDLNAGADANLDIKKPHVDI 353
+ D D ++ G K K ID + P G ++ P+ ++ L ++D++ P D
Sbjct: 1534 VSMPDVDLNLKGPKLKGEIDASV--PELEGDLRGPQVDVKGPLVEAEVPDVDLECP--DA 1589
Query: 354 DLKGP---IGDNGFNSK-----NADIDLKGPK--GDIGLKGPKADIDLKGPKLDVDL 494
LKGP + + F + + D+ LKGPK GD + PK + DL GP + V++
Sbjct: 1590 KLKGPKFKMPEMHFKAPKISMPDVDLHLKGPKVKGDADVSVPKLEGDLTGPSVGVEV 1646
Score = 62.0 bits (149), Expect = 2e-09
Identities = 69/281 (24%), Positives = 117/281 (41%), Gaps = 45/281 (16%)
Frame = +3
Query: 81 LDIKKPHVDIDLKGPKGDIG------------LKGPK---ADIDLKGPKL---DADFDVD 206
+D+ P D+D+ GPK D+ LKGPK ++++K PK+ D D +
Sbjct: 522 VDVNLPKADVDISGPKIDVTAPDVSIEEPEGKLKGPKFKMPEMNIKVPKISMPDVDLHLK 581
Query: 207 GKKKKHGIDLGINLPSFGGKVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGP------ 368
G K D + +P ++K P D++L + A +DI P D++++GP
Sbjct: 582 GPNVKGEYD--VTMPKVESEIKVP----DVELKS---AKMDIDVP--DVEVQGPDWHLKM 630
Query: 369 -------IGDNGFNSKNADIDLKGPKGDIGLKGPKA-----DIDLKGPKLDVDLKGXXXX 512
GF ++ ++D+ PK D+ + GPK D++++GP + LKG
Sbjct: 631 PKMKMPKFSMPGFKAEGPEVDVNLPKADVDISGPKVGVEVPDVNIEGP--EGKLKGPKFK 688
Query: 513 XXXXXXXXXXXXXXXXXXXXXXHGI--DLGFNLPSFGAKMKKPKGEI---DLDLNAGADA 677
+ + +P +K PK ++ D+++ G D
Sbjct: 689 MPEMNIKAPKISMPDVDLHMKGPKVKGEYDMTVPKLEGDLKGPKVDVSAPDVEMQ-GPDW 747
Query: 678 NL---DIKKPHVDI-DLKGPIGDNGFNSKNADIDSKGPKGD 788
NL IK P + LKG + N A++D PK D
Sbjct: 748 NLKMPKIKMPKFSMPSLKGEGPEFDVNLSKANVDISAPKVD 788
Score = 62.0 bits (149), Expect = 2e-09
Identities = 77/296 (26%), Positives = 126/296 (42%), Gaps = 44/296 (14%)
Frame = +3
Query: 27 KKPKGEIDLDLNAGADANLDIKK---PHVDIDLKGP--KGDIGLKGPKA-------DIDL 170
++P+G++ + N+ + K P VD+ LKGP KG+ + PK D++L
Sbjct: 548 EEPEGKLKGPKFKMPEMNIKVPKISMPDVDLHLKGPNVKGEYDVTMPKVESEIKVPDVEL 607
Query: 171 KGPKLDADF-DVDGKKKKHGIDLG-INLPSFGGKVKKPKG-EIDLDLNAGADANLDIKKP 341
K K+D D DV+ + + + + +P F K +G E+D++L A++DI P
Sbjct: 608 KSAKMDIDVPDVEVQGPDWHLKMPKMKMPKFSMPGFKAEGPEVDVNL---PKADVDISGP 664
Query: 342 HV-----DIDLKGPIGD---------------NGFNSKNADIDLKGPK--GDIGLKGPKA 455
V D++++GP G + + D+ +KGPK G+ + PK
Sbjct: 665 KVGVEVPDVNIEGPEGKLKGPKFKMPEMNIKAPKISMPDVDLHMKGPKVKGEYDMTVPKL 724
Query: 456 DIDLKGPKLDVDLKGXXXXXXXXXXXXXXXXXXXXXXXXXXHGIDLGFNLPSFGAKMKKP 635
+ DLKGPK+DV +P F K
Sbjct: 725 EGDLKGPKVDVSAPDVEMQGPDWNLKMPK------------------IKMPKFSMPSLKG 766
Query: 636 KG-EIDLDLNAGADANLDIKKPHV-----DIDLKGPIGD-NGFNSKNADIDSKGPK 782
+G E D++L + AN+DI P V D+ L+GP G G K ++ + PK
Sbjct: 767 EGPEFDVNL---SKANVDISAPKVDTNAPDLSLEGPEGKLKGPKFKMPEMHFRAPK 819
Score = 60.5 bits (145), Expect = 6e-09
Identities = 72/284 (25%), Positives = 121/284 (42%), Gaps = 31/284 (10%)
Frame = +3
Query: 33 PKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKA---DIDLKGPKL---DAD 194
PKG+I + + ++++ P V+++ G K LKGP D+ +K PK+ D D
Sbjct: 406 PKGDISI-----SGPKVNVEAPDVNLEGLGGK----LKGPDVKLPDMSVKTPKISMPDVD 456
Query: 195 FDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDL-DLNA-GADANLDIKKPHVDIDLKGP 368
V G K K D + +P G++K PK +ID D++ G D +L + K +K P
Sbjct: 457 LHVKGTKVKGEYD--VTVPKLEGELKGPKVDIDAPDVDVHGPDWHLKMPK------MKMP 508
Query: 369 -IGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGPKLDVD-----LKGXXXXXXXXXX 530
GF ++ ++D+ PK D+ + GPK ID+ P + ++ LKG
Sbjct: 509 KFSVPGFKAEGPEVDVNLPKADVDISGPK--IDVTAPDVSIEEPEGKLKGPKFKMPEMNI 566
Query: 531 XXXXXXXXXXXXXXXXHGIDLGFNLPS----FGAKMKKPKGEIDLDLNAGADANLDIKKP 698
+DL P+ + M K + EI + A +DI P
Sbjct: 567 KVPKISMP---------DVDLHLKGPNVKGEYDVTMPKVESEIKVPDVELKSAKMDIDVP 617
Query: 699 HVDIDLKGP-------------IGDNGFNSKNADIDSKGPKGDI 791
D++++GP GF ++ ++D PK D+
Sbjct: 618 --DVEVQGPDWHLKMPKMKMPKFSMPGFKAEGPEVDVNLPKADV 659
Score = 50.4 bits (119), Expect = 6e-06
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Frame = +3
Query: 18 RKGKKPKGEIDLDL------NAGADANLDIKKPHVDIDLKGPKGDI-GLKGPKADIDLKG 176
R+G+ PK + + + G L I+ P +++ + P +I GL+G + G
Sbjct: 73 REGQTPKAGLRVSAPEVSVGHKGGKPGLTIQAPQLEVSV--PSANIEGLEGKLKGPQITG 130
Query: 177 PKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEI---DLDLNAGADANLDIKKPHV 347
P L+ D + G K + I + + P GG + P E+ D+D+ G + L++ K V
Sbjct: 131 PSLEGDLGLKGAKPQGHIGVDASAPQIGGSITGPSVEVQAPDIDVQ-GPGSKLNVPKMKV 189
Query: 348 DIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDL 467
+G + ID+ P G++ + G D+ L
Sbjct: 190 P-----KFSVSGAKGEETGIDVTLPTGEVTVPGVSGDVSL 224
Score = 38.5 bits (88), Expect = 0.024
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 34/121 (28%)
Frame = +3
Query: 21 KGKKPKGEIDLDL----NAGADANLDIKKPHV-----DIDLKGPKGDIGLKGPK------ 155
KG K KGEID + +D+K P V D+DL+ P D LKGPK
Sbjct: 1544 KGPKLKGEIDASVPELEGDLRGPQVDVKGPLVEAEVPDVDLECP--DAKLKGPKFKMPEM 1601
Query: 156 -----------ADIDLKGPKLDADFDVDGKKKK---HGIDLGINLPSF-----GGKVKKP 278
D+ LKGPK+ D DV K + G +G+ +P K+K P
Sbjct: 1602 HFKAPKISMPDVDLHLKGPKVKGDADVSVPKLEGDLTGPSVGVEVPDVELECPDAKLKGP 1661
Query: 279 K 281
K
Sbjct: 1662 K 1662
>sp|Q60754|MTCO_MOUSE Macrophage receptor MARCO (Macrophage receptor with collagenous
structure)
Length = 518
Score = 47.0 bits (110), Expect = 7e-05
Identities = 43/128 (33%), Positives = 49/128 (38%), Gaps = 3/128 (2%)
Frame = +3
Query: 126 KGDIGLKGPKADIDLKG-PKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKP--KGEIDL 296
KG+ G GPK G P L G+K G D P G P KGE L
Sbjct: 149 KGERGSPGPKGAPGAPGIPGLPGPAAEKGEKGAAGRD---GTPGVQGPQGPPGSKGEAGL 205
Query: 297 DLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGP 476
GA G G G DI L GPKG+ G KG K D+ L G
Sbjct: 206 QGLTGAPGKQGAT---------GAPGPRGEKGSKGDIGLTGPKGEHGTKGDKGDLGLPGN 256
Query: 477 KLDVDLKG 500
K D+ +KG
Sbjct: 257 KGDMGMKG 264
Score = 45.8 bits (107), Expect = 2e-04
Identities = 41/129 (31%), Positives = 48/129 (37%), Gaps = 13/129 (10%)
Frame = +3
Query: 105 DIDLKGPKGDIGLKGPKADIDLKGPKLDADFDVD-------------GKKKKHGIDLGIN 245
DI L GPKG+ G KG K D+ L G K D D G K G+
Sbjct: 232 DIGLTGPKGEHGTKGDKGDLGLPGNKGDMGMKGDTGPMGSPGAQGGKGDAGKPGLPGLAG 291
Query: 246 LPSFGGKVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPK 425
P G KP G + GA K L GP G G +KG K
Sbjct: 292 SPGVKGDQGKP-GVQGVPGPQGAPGLSGAKGEPGRTGLPGPAGPPGIAGNPGIAGVKGSK 350
Query: 426 GDIGLKGPK 452
GD G++G K
Sbjct: 351 GDTGIQGQK 359
Score = 44.3 bits (103), Expect = 4e-04
Identities = 48/187 (25%), Positives = 68/187 (36%), Gaps = 31/187 (16%)
Frame = +3
Query: 33 PKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKG------------ 176
P+GE G+ ++ + P + KG KGD+GL G K D+ +KG
Sbjct: 223 PRGE------KGSKGDIGLTGPKGEHGTKGDKGDLGLPGNKGDMGMKGDTGPMGSPGAQG 276
Query: 177 ----------PKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGE---------IDLD 299
P L V G + K G+ G+ P + KGE
Sbjct: 277 GKGDAGKPGLPGLAGSPGVKGDQGKPGVQ-GVPGPQGAPGLSGAKGEPGRTGLPGPAGPP 335
Query: 300 LNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGPK 479
AG +K D ++G G G + + KG G GL GPK + G K
Sbjct: 336 GIAGNPGIAGVKGSKGDTGIQGQKGTKGESGVPGLVGRKGDTGSPGLAGPKGEPGRVGQK 395
Query: 480 LDVDLKG 500
D +KG
Sbjct: 396 GDPGMKG 402
Score = 30.0 bits (66), Expect = 8.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 705 DIDLKGPIGDNGFNSKNADIDSKGPKGDIG 794
DI L GP G++G D+ G KGD+G
Sbjct: 232 DIGLTGPKGEHGTKGDKGDLGLPGNKGDMG 261
>sp|O42350|CO1A2_RANCA Collagen alpha 2(I) chain precursor
Length = 1355
Score = 46.2 bits (108), Expect = 1e-04
Identities = 45/159 (28%), Positives = 63/159 (39%), Gaps = 7/159 (4%)
Frame = +3
Query: 21 KGKK-PKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKLDADF 197
+GK+ P GE ++G N I+ L GP G G GP GP
Sbjct: 369 EGKRGPNGEAG---SSGPSGNAGIRGVPGTRGLPGPDGRAGGIGPAGSRGSSGPPGARGP 425
Query: 198 DVD-GKKKKHGIDLGINLPSFGGK-----VKKPKGEIDLDLNAGADANLDIKKPHVDIDL 359
+ D G+ + G+ LP F G + P G ++ +GA + I
Sbjct: 426 NGDAGRPGEPGLLGARGLPGFSGSNGPQGKEGPAGPQGIEGRSGAAGPAGARGEPGAIGF 485
Query: 360 KGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGP 476
GP G NG KN D +GP G+ G GP + +GP
Sbjct: 486 PGPKGPNGEPGKNGDKGNQGPSGNRGAPGPDGNNGAQGP 524
Score = 36.2 bits (82), Expect = 0.12
Identities = 54/250 (21%), Positives = 78/250 (31%), Gaps = 25/250 (10%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDLD 299
GP G +G GP + G V+G K G LP GG P G +
Sbjct: 277 GPPGSLGPAGPPGNPGTNG--------VNGAKGTAG------LPGVGGAPGLPGGR-GIP 321
Query: 300 LNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGP---KGDIGLKGPKADIDLK 470
AG + D + G GD G + + +GP G+ G +GP +
Sbjct: 322 GPAGPAGPSGARGLAGDPGIAGGKGDTGSKGEPGSVGQQGPAGPSGEEGKRGPNGEAGSS 381
Query: 471 GPKLDVDLKG-----------------XXXXXXXXXXXXXXXXXXXXXXXXXXHGIDLGF 599
GP + ++G G+
Sbjct: 382 GPSGNAGIRGVPGTRGLPGPDGRAGGIGPAGSRGSSGPPGARGPNGDAGRPGEPGLLGAR 441
Query: 600 NLPSFGAK-----MKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADI 764
LP F + P G ++ +GA + I GP G NG KN D
Sbjct: 442 GLPGFSGSNGPQGKEGPAGPQGIEGRSGAAGPAGARGEPGAIGFPGPKGPNGEPGKNGDK 501
Query: 765 DSKGPKGDIG 794
++GP G+ G
Sbjct: 502 GNQGPSGNRG 511
Score = 35.0 bits (79), Expect = 0.27
Identities = 33/127 (25%), Positives = 43/127 (33%), Gaps = 3/127 (2%)
Frame = +3
Query: 105 DIDLKGPKGDIGLKGPKADIDLKGPK-LDADFDVDGKKKKHGIDLGINLPSFGGKVKKP- 278
D KGPKG+ G GP GP + G + G P G+ P
Sbjct: 731 DRGAKGPKGEAGSPGPLGAHGSAGPAGPNGPAGSTGARGDAGPSGATGFPGPAGRAGAPG 790
Query: 279 -KGEIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKA 455
G + G + P D GP+G G ++ + L G KG G GP
Sbjct: 791 PPGNVGPSGPTGHPGKDGSRGPRGD---SGPVGRPGEQGQHGPVGLAGDKGPSGEAGPAG 847
Query: 456 DIDLKGP 476
GP
Sbjct: 848 PPGAAGP 854
Score = 33.1 bits (74), Expect = 1.0
Identities = 35/128 (27%), Positives = 40/128 (31%), Gaps = 9/128 (7%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPKLDA----DFDVDGKKKKHGIDLGINLPSFGGKV-----K 272
GP G G +G KG K DA D+ G+ G P G
Sbjct: 628 GPAGIPGERGTAGTPGTKGEKGDAGNSGDYGNPGRDGARGPAGAAGAPGPAGGPGDRGES 687
Query: 273 KPKGEIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPK 452
P G + GA P GP G G D KGPKG+ G GP
Sbjct: 688 GPAGPSGVAGPRGAPGERGEAGPAGPTGFAGPPGAAGHTGAKGDRGAKGPKGEAGSPGPL 747
Query: 453 ADIDLKGP 476
GP
Sbjct: 748 GAHGSAGP 755
Score = 32.3 bits (72), Expect = 1.8
Identities = 33/122 (27%), Positives = 41/122 (33%), Gaps = 2/122 (1%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGI--DLGINLPSFGGKVKKPKGEID 293
GP G G G K D KGPK +A G HG G N P+ + G
Sbjct: 718 GPPGAAGHTGAKGDRGAKGPKGEAGSP--GPLGAHGSAGPAGPNGPAGSTGARGDAGPSG 775
Query: 294 LDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKG 473
G P ++ GP G G + GP G G +G + L G
Sbjct: 776 ATGFPGPAGRAGAPGPPGNVGPSGPTGHPGKDGSRGPRGDSGPVGRPGEQGQHGPVGLAG 835
Query: 474 PK 479
K
Sbjct: 836 DK 837
Score = 32.0 bits (71), Expect = 2.3
Identities = 30/120 (25%), Positives = 45/120 (37%)
Frame = +3
Query: 117 KGPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDL 296
+GP G G++G K + +G + +DG+K +G+ LP G GE
Sbjct: 987 RGPAGPQGVRGDKGEAGERGAR-----GLDGRKGHNGLS---GLPGPSGT----PGE--- 1031
Query: 297 DLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGP 476
G ++ P GP G G + + GP+G G GP GP
Sbjct: 1032 ---TGPSGSVGPVGPRGPSGPSGPPGKEGRSGHPGAMGPVGPRGPAGFTGPAGPPGPPGP 1088
>sp|Q61245|COBA1_MOUSE Collagen alpha 1(XI) chain precursor
Length = 1804
Score = 45.4 bits (106), Expect = 2e-04
Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 3/124 (2%)
Frame = +3
Query: 117 KGPKGDIGLKGPKADIDLKG-PKLDADFDVDGKKKKHGIDLGINLPSFGGKV--KKPKGE 287
+GP G G KGP+ L G P D GK+ + G + P G + P+G
Sbjct: 703 QGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGV 762
Query: 288 IDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDL 467
GAD +K KG G++GF D+ LKG +G++G GP+ +
Sbjct: 763 ------KGADGVRGLKGS------KGEKGEDGFPGFKGDMGLKGDRGEVGQVGPRGEDGP 810
Query: 468 KGPK 479
+GPK
Sbjct: 811 EGPK 814
Score = 44.7 bits (104), Expect = 3e-04
Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 22/147 (14%)
Frame = +3
Query: 105 DIDLKGPKGDIGLKGPKADIDLKGPKLDADFDVD-------GKKKKHGIDLGINLPSFGG 263
D+ LKG +G++G GP+ + +GPK A D G+K K G+ LP + G
Sbjct: 789 DMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVP---GLPGYPG 845
Query: 264 KVKKPKGEIDLDLNAGADANLDIKK---------------PHVDIDLKGPIGDNGFNSKN 398
+ + PKG GA+ + P +GP G G +
Sbjct: 846 R-QGPKGSTGFPGFPGANGEKGARGIAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTS 904
Query: 399 ADIDLKGPKGDIGLKGPKADIDLKGPK 479
GP G+ G +GP+ + GPK
Sbjct: 905 GGDGPPGPPGERGPQGPQGPVGFPGPK 931
Score = 42.0 bits (97), Expect = 0.002
Identities = 44/156 (28%), Positives = 62/156 (39%), Gaps = 5/156 (3%)
Frame = +3
Query: 27 KKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKLD-ADFDV 203
K KGE D G ++ +K ++ GP+G+ G +GPK GP D
Sbjct: 772 KGSKGEKGEDGFPGFKGDMGLKGDRGEVGQVGPRGEDGPEGPKG---RAGPTGDPGPSGQ 828
Query: 204 DGKKKKHGIDLGINLPSFGGKVKKPKGEIDLDLNAGADANLDIK----KPHVDIDLKGPI 371
G+K K G+ LP + G+ + PKG GA+ + KP +GP
Sbjct: 829 AGEKGKLGVP---GLPGYPGR-QGPKGSTGFPGFPGANGEKGARGIAGKPG-PRGQRGPT 883
Query: 372 GDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGPK 479
G G GPKG G GP +GP+
Sbjct: 884 GPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQ 919
Score = 39.3 bits (90), Expect = 0.014
Identities = 34/123 (27%), Positives = 48/123 (39%), Gaps = 5/123 (4%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKP-----KG 284
GP+G G G K KGP+ G + G+ + LP G P KG
Sbjct: 1076 GPQGPPGPAGEKGAPGEKGPQ--------GPAGRDGVQGPVGLPGPAGPAGSPGEDGDKG 1127
Query: 285 EIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADID 464
EI G+ + P L+GP+G G + + GP+G G+ G K D
Sbjct: 1128 EIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGE---PGPRGQQGMFGQKGDEG 1184
Query: 465 LKG 473
+G
Sbjct: 1185 ARG 1187
Score = 38.9 bits (89), Expect = 0.019
Identities = 38/128 (29%), Positives = 49/128 (38%)
Frame = +3
Query: 117 KGPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDL 296
+G G GL GP+ I G K G + K G+ LP G P G
Sbjct: 691 QGNPGSQGLPGPQGPIGPPGEK--------GPQGKPGL---AGLPGADG----PPGHPGK 735
Query: 297 DLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGP 476
+ +G L P I GP G G + KG KG+ G G K D+ LKG
Sbjct: 736 EGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGD 795
Query: 477 KLDVDLKG 500
+ +V G
Sbjct: 796 RGEVGQVG 803
Score = 36.2 bits (82), Expect = 0.12
Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 3/123 (2%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPK-LDADFDVDGKKKKHGIDLGINLPSFGGKVKKP--KGEI 290
GP G G G K +I G K D +G G+ + P G +P +G+
Sbjct: 1115 GPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQ 1174
Query: 291 DLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLK 470
+ G + I L+G G G +N D+ GP G G +GP+
Sbjct: 1175 GMFGQKGDEGARGFPGLPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGAD 1234
Query: 471 GPK 479
GP+
Sbjct: 1235 GPQ 1237
Score = 32.3 bits (72), Expect = 1.8
Identities = 30/113 (26%), Positives = 40/113 (35%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDLD 299
GP G+ G +GP+ + GPK G G D LP G+ +GE
Sbjct: 911 GPPGERGPQGPQGPVGFPGPK--------GPPGPAGKD---GLPGHPGQ----RGETGFQ 955
Query: 300 LNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKAD 458
G + P GPIG+ G +G G G +G K D
Sbjct: 956 GKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGD 1008
Score = 32.0 bits (71), Expect = 2.3
Identities = 40/148 (27%), Positives = 53/148 (35%), Gaps = 2/148 (1%)
Frame = +3
Query: 63 AGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGI 242
+G D I+ + L G +G GLKG + +GP G++ G I
Sbjct: 1015 SGKDGPAGIRGFPGERGLPGAQGAPGLKGGEGPQGPQGP-----VGSPGERGSAGAAGPI 1069
Query: 243 NLPSFGGKVKKP--KGEIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLK 416
LP G P GE G + L GP G G ++ D K
Sbjct: 1070 GLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGD---K 1126
Query: 417 GPKGDIGLKGPKADIDLKGPKLDVDLKG 500
G G+ G KG K D GP L+G
Sbjct: 1127 GEIGEPGQKGSKGDKGENGPPGPPGLQG 1154
Score = 30.8 bits (68), Expect = 5.1
Identities = 38/135 (28%), Positives = 48/135 (35%), Gaps = 16/135 (11%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKG----------------PKLDADFDVDGKKKKHGIDLGINLP 251
GP+G G+ GP + L G P L D G+K G+ I P
Sbjct: 1403 GPEGLRGIPGPVGEQGLPGAAGQDGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPP 1462
Query: 252 SFGGKVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGD 431
G+ K +G + GA + I P GPIG G KG KG
Sbjct: 1463 GEQGE-KGDRGLPGSQGSPGAKGDGGIPGP------AGPIGPPGPPGLPGPAGPKGNKGS 1515
Query: 432 IGLKGPKADIDLKGP 476
G G K D + GP
Sbjct: 1516 SGPTGQKGDSGMPGP 1530
Score = 30.4 bits (67), Expect = 6.7
Identities = 37/143 (25%), Positives = 54/143 (37%), Gaps = 19/143 (13%)
Frame = +3
Query: 108 IDLKGPKGDIGL---------------KGPKADIDLKGPK----LDADFDVDGKKKKHGI 230
I L+GP G +GL KG D +GP+ GK+ + G
Sbjct: 523 IALRGPPGPMGLTGRPGPVGGPGSTGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGA 582
Query: 231 DLGINLPSFGGKVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADID 410
D G +P G KG+ D G + + G GD+G ++ +I
Sbjct: 583 DGGRGMPGESGS----KGDRGFDGLPGLPGDKGHRGERGPQGPPGLPGDDGMRGEDGEI- 637
Query: 411 LKGPKGDIGLKGPKADIDLKGPK 479
GP+G G GP+ L GP+
Sbjct: 638 --GPRGLPGEAGPRG---LLGPR 655
>sp|Q28083|COBA1_BOVIN Collagen alpha 1(XI) chain precursor
Length = 911
Score = 45.4 bits (106), Expect = 2e-04
Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 3/124 (2%)
Frame = +3
Query: 117 KGPKGDIGLKGPKADIDLKG-PKLDADFDVDGKKKKHGIDLGINLPSFGGKV--KKPKGE 287
+GP G G KGP+ L G P D GK+ + G + P G + P+G
Sbjct: 472 QGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGSLGPPGPQGPIGYPGPRGV 531
Query: 288 IDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDL 467
GAD +K KG G++GF D+ LKG +G++G GP+ +
Sbjct: 532 ------KGADGVRGLKGS------KGEKGEDGFPGFKGDMGLKGDRGEVGQVGPRGEDGP 579
Query: 468 KGPK 479
+GPK
Sbjct: 580 EGPK 583
Score = 44.7 bits (104), Expect = 3e-04
Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 22/147 (14%)
Frame = +3
Query: 105 DIDLKGPKGDIGLKGPKADIDLKGPKLDADFDVD-------GKKKKHGIDLGINLPSFGG 263
D+ LKG +G++G GP+ + +GPK A D G+K K G+ LP + G
Sbjct: 558 DMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPPGQAGEKGKLGVP---GLPGYPG 614
Query: 264 KVKKPKGEIDLDLNAGADANLDIKK---------------PHVDIDLKGPIGDNGFNSKN 398
+ + PKG GA+ + P +GP G G +
Sbjct: 615 R-QGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTS 673
Query: 399 ADIDLKGPKGDIGLKGPKADIDLKGPK 479
GP G+ G +GP+ + GPK
Sbjct: 674 GGDGPPGPPGERGPQGPQGPVGFPGPK 700
Score = 41.2 bits (95), Expect = 0.004
Identities = 44/156 (28%), Positives = 62/156 (39%), Gaps = 5/156 (3%)
Frame = +3
Query: 27 KKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKLD-ADFDV 203
K KGE D G ++ +K ++ GP+G+ G +GPK GP D
Sbjct: 541 KGSKGEKGEDGFPGFKGDMGLKGDRGEVGQVGPRGEDGPEGPKG---RAGPTGDPGPPGQ 597
Query: 204 DGKKKKHGIDLGINLPSFGGKVKKPKGEIDLDLNAGADANLDIK----KPHVDIDLKGPI 371
G+K K G+ LP + G+ + PKG GA+ + KP +GP
Sbjct: 598 AGEKGKLGVP---GLPGYPGR-QGPKGSTGFPGFPGANGEKGARGVAGKPG-PRGQRGPT 652
Query: 372 GDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGPK 479
G G GPKG G GP +GP+
Sbjct: 653 GPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQ 688
Score = 39.7 bits (91), Expect = 0.011
Identities = 38/127 (29%), Positives = 49/127 (38%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDLD 299
GP G G GP+ L GP+ G+K G LP G P G +
Sbjct: 455 GPPGQQGNPGPQG---LPGPQ--GPIGPPGEKGPQGKPGLAGLPGADG----PPGHPGKE 505
Query: 300 LNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGPK 479
+G +L P I GP G G + KG KG+ G G K D+ LKG +
Sbjct: 506 GQSGEKGSLGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDR 565
Query: 480 LDVDLKG 500
+V G
Sbjct: 566 GEVGQVG 572
Score = 37.0 bits (84), Expect = 0.071
Identities = 33/120 (27%), Positives = 52/120 (43%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDLD 299
G KG++G GP+ ++GP GK+ + G D G +P G KG+ D
Sbjct: 317 GAKGEMGDPGPQGPRGVQGPP--GPTGKPGKRGRPGADGGRGMPGEPGA----KGDRGFD 370
Query: 300 LNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGPK 479
G + + GP G++G ++ +I GP+G G GP+ L GP+
Sbjct: 371 GLPGLPGDKGHRGERGPQGPPGPPGEDGIRGEDGEI---GPRGLPGEAGPRG---LLGPR 424
Score = 30.0 bits (66), Expect = 8.7
Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 6/116 (5%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDLD 299
GP GD G +GP L G DG G L + +GG K +
Sbjct: 230 GPPGDPGERGPPGRPGLPG--------ADGLPGPPGTMLVLPF-RYGGDSSKGPTVSAQE 280
Query: 300 LNAGA---DANLDIKKPHVDIDLKG---PIGDNGFNSKNADIDLKGPKGDIGLKGP 449
A A A + ++ P + L G P+G G + ++ GP+G G++GP
Sbjct: 281 AQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGEMGDPGPQGPRGVQGP 336
>sp|P12107|CA1B_HUMAN Collagen alpha 1(XI) chain precursor
Length = 1806
Score = 45.1 bits (105), Expect = 3e-04
Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 3/124 (2%)
Frame = +3
Query: 117 KGPKGDIGLKGPKADIDLKG-PKLDADFDVDGKKKKHGIDLGINLPSFGGKV--KKPKGE 287
+GP G G KGP+ L G P D GK+ + G + P G + P+G
Sbjct: 705 QGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGV 764
Query: 288 IDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDL 467
GAD +K KG G++GF D+ LKG +G++G GP+ +
Sbjct: 765 ------KGADGVRGLKGS------KGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGP 812
Query: 468 KGPK 479
+GPK
Sbjct: 813 EGPK 816
Score = 44.3 bits (103), Expect = 4e-04
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Frame = +3
Query: 105 DIDLKGPKGDIGLKGPKADIDLKGPKLDADFDVD-------GKKKKHGIDLGINLPSFGG 263
D+ LKG +G++G GP+ + +GPK A D G+K K G+ LP + G
Sbjct: 791 DMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVP---GLPGYPG 847
Query: 264 KVKKPKGEIDLDLNAGADANLDIK----KPHVDIDLKGPIGDNGFNSKNADIDLKGPKGD 431
+ + PKG GA+ + KP +GP G G GPKG
Sbjct: 848 R-QGPKGSTGFPGFPGANGEKGARGVAGKPG-PRGQRGPTGPRGSRGARGPTGKPGPKGT 905
Query: 432 IGLKGPKADIDLKGPK 479
G GP +GP+
Sbjct: 906 SGGDGPPGPPGERGPQ 921
Score = 40.8 bits (94), Expect = 0.005
Identities = 35/132 (26%), Positives = 50/132 (37%), Gaps = 5/132 (3%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKP-----KG 284
GP+G G G K KGP+ G + G+ + LP G P KG
Sbjct: 1078 GPQGPPGPAGEKGAPGEKGPQ--------GPAGRDGVQGPVGLPGPAGPAGSPGEDGDKG 1129
Query: 285 EIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADID 464
EI G+ P L+GP+G G + + +G +G G KG +
Sbjct: 1130 EIGEPGQKGSKGGKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARG 1189
Query: 465 LKGPKLDVDLKG 500
GP + L+G
Sbjct: 1190 FPGPPGPIGLQG 1201
Score = 38.1 bits (87), Expect = 0.032
Identities = 37/123 (30%), Positives = 47/123 (38%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDLD 299
GP G G GP+ L GP+ G+K G LP G P G +
Sbjct: 688 GPPGQQGNPGPQG---LPGPQ--GPIGPPGEKGPQGKPGLAGLPGADG----PPGHPGKE 738
Query: 300 LNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGPK 479
+G L P I GP G G + KG KG+ G G K D+ LKG +
Sbjct: 739 GQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDR 798
Query: 480 LDV 488
+V
Sbjct: 799 GEV 801
Score = 37.7 bits (86), Expect = 0.042
Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 2/122 (1%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKP--KGEID 293
G KG+IG G K KG +G G+ + P G +P +G+
Sbjct: 1126 GDKGEIGEPGQKGSKGGKGE--------NGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQG 1177
Query: 294 LDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKG 473
+ G + P I L+G G G +N D+ GP G G +GP+ G
Sbjct: 1178 MFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADG 1237
Query: 474 PK 479
P+
Sbjct: 1238 PQ 1239
Score = 37.4 bits (85), Expect = 0.054
Identities = 34/120 (28%), Positives = 51/120 (42%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDLD 299
G KG+ G GP+ ++GP GK+ + G D G +P G KG+ D
Sbjct: 550 GAKGESGDPGPQGPRGVQGPP--GPTGKPGKRGRPGADGGRGMPGEPGA----KGDRGFD 603
Query: 300 LNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGPK 479
G + + GP GD+G ++ +I GP+G G GP+ L GP+
Sbjct: 604 GLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEI---GPRGLPGEAGPRG---LLGPR 657
Score = 32.3 bits (72), Expect = 1.8
Identities = 36/124 (29%), Positives = 44/124 (35%), Gaps = 3/124 (2%)
Frame = +3
Query: 117 KGPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDL 296
KG KG+ G +GP GP+ A GK G+ + P GE L
Sbjct: 1377 KGAKGEAGAEGPPGKTGPVGPQGPA-----GKPGPEGLR----------GIPGPVGEQGL 1421
Query: 297 DLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGD---IGLKGPKADIDL 467
AG D GP+G G D KG KG IGL GP +
Sbjct: 1422 PGAAGQDGP------------PGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGE 1469
Query: 468 KGPK 479
KG +
Sbjct: 1470 KGDR 1473
Score = 32.0 bits (71), Expect = 2.3
Identities = 34/133 (25%), Positives = 47/133 (35%), Gaps = 15/133 (11%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPK-------LDADFDVDGKKKKHGIDLGINLPSFGGKVKK- 275
GP G+ G +GP+ + GPK D G++ + G P GG V
Sbjct: 913 GPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQ 972
Query: 276 -------PKGEIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDI 434
P GE G + KG G G + K+ L+G G+
Sbjct: 973 GPTGETGPIGERGYPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGER 1032
Query: 435 GLKGPKADIDLKG 473
GL G + LKG
Sbjct: 1033 GLPGAQGAPGLKG 1045
Score = 30.8 bits (68), Expect = 5.1
Identities = 35/119 (29%), Positives = 42/119 (35%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDLD 299
GP G GL G K D KG +K H +G+ P K +G
Sbjct: 1432 GPMGPPGLPGLKGDPGSKG------------EKGHPGLIGLIGPPGEQGEKGDRGLPGTQ 1479
Query: 300 LNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGP 476
+ GA + I P GP+G G KG KG G G K D L GP
Sbjct: 1480 GSPGAKGDGGIPGP------AGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGP 1532
Score = 30.4 bits (67), Expect = 6.7
Identities = 39/149 (26%), Positives = 51/149 (34%)
Frame = +3
Query: 33 PKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKLDADFDVDGK 212
P GE+ AG D K D GP G G GP +GP A +G+
Sbjct: 1319 PPGELG---PAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAG--AEGR 1373
Query: 213 KKKHGIDLGINLPSFGGKVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNS 392
+ + G GK G + AG ++ + GP+G+ G
Sbjct: 1374 QGEKGAKGEAGAEGPPGKT----GPVGPQGPAGKPGPEGLR------GIPGPVGEQGLPG 1423
Query: 393 KNADIDLKGPKGDIGLKGPKADIDLKGPK 479
GP G GL G K D KG K
Sbjct: 1424 AAGQDGPPGPMGPPGLPGLKGDPGSKGEK 1452
>sp|Q07563|COHA1_MOUSE Collagen alpha 1(XVII) chain (Bullous pemphigoid antigen 2) (180
kDa bullous pemphigoid antigen 2)
Length = 1470
Score = 44.7 bits (104), Expect = 3e-04
Identities = 39/136 (28%), Positives = 54/136 (39%), Gaps = 9/136 (6%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKG-PKLDADFDVDGKKKKHGIDLGINLPSFGGKVKK------- 275
GPKGD+G +GPK D L G P + G + G I P G + +
Sbjct: 577 GPKGDMGSQGPKGDRGLPGTPGIPGPLGHPGPEGPKGQKGSIGDPGMEGPIGQRGLAGPM 636
Query: 276 -PKGEIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPK 452
P+GE +G + I L G G G + +GP G +G +G +
Sbjct: 637 GPRGEPG-PPGSGEKGDRGIAGEQGPQGLPGVPGPPGLRGHSGSPGPQGPPGAVGPQGLR 695
Query: 453 ADIDLKGPKLDVDLKG 500
D+ L G K D L G
Sbjct: 696 GDVGLPGVKGDKGLMG 711
Score = 30.8 bits (68), Expect = 5.1
Identities = 33/118 (27%), Positives = 41/118 (34%)
Frame = +3
Query: 105 DIDLKGPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKPKG 284
D+ L G KGD GL GP GPK D G+K G+ + G V +P
Sbjct: 697 DVGLPGVKGDKGLMGPP------GPKGD-----QGEKGPRGLTGEPGIRGLPGAVGEP-- 743
Query: 285 EIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKAD 458
GA + GP G +G + L G G G GP D
Sbjct: 744 --------GAKGAM------------GPAGADGQQGSRGEQGLTGMPGTRGPPGPAGD 781
>sp|P20908|CA15_HUMAN Collagen alpha 1(V) chain precursor
Length = 1838
Score = 44.3 bits (103), Expect = 4e-04
Identities = 47/155 (30%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Frame = +3
Query: 27 KKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKLD-ADFDV 203
K KGE D G ++ IK +I GP+G+ G +GPK GP D
Sbjct: 804 KGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGR---GGPNGDPGPLGP 860
Query: 204 DGKKKKHGIDLGINLPSFGGKVKKPKGEIDLDLNAGADANLDIK----KPHVDIDLKGPI 371
G+K K G+ LP + G+ + PKG I GA+ + KP +GP
Sbjct: 861 PGEKGKLGVP---GLPGYPGR-QGPKGSIGFPGFPGANGEKGGRGTPGKPGPR-GQRGPT 915
Query: 372 GDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGP 476
G G GPKG+ G GP +GP
Sbjct: 916 GPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGP 950
Score = 43.9 bits (102), Expect = 6e-04
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 6/128 (4%)
Frame = +3
Query: 114 LKGPKGDIGLKGPKADIDLKG----PKLDADFDVDGKKKKHGIDLGINLPSFGGKV--KK 275
L GP+G IG G K + G P D GK+ G G P G +
Sbjct: 731 LPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPG 790
Query: 276 PKGEIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKA 455
P+G GAD +K KG G++GF D+ +KG +G+IG GP+
Sbjct: 791 PRGV------KGADGIRGLK------GTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRG 838
Query: 456 DIDLKGPK 479
+ +GPK
Sbjct: 839 EDGPEGPK 846
Score = 43.1 bits (100), Expect = 0.001
Identities = 38/121 (31%), Positives = 53/121 (43%)
Frame = +3
Query: 114 LKGPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEID 293
LKG GD+G +GP+ ++GP A G++ + G D +P G PKG+
Sbjct: 581 LKGEPGDVGPQGPRG---VQGPPGPAG--KPGRRGRAGSDGARGMPGQTG----PKGDRG 631
Query: 294 LDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKG 473
D AG K D GP G G + + D GP+G G GP+ + KG
Sbjct: 632 FDGLAGLPGE---KGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGKPGPRGLLGPKG 688
Query: 474 P 476
P
Sbjct: 689 P 689
Score = 42.0 bits (97), Expect = 0.002
Identities = 37/132 (28%), Positives = 53/132 (40%), Gaps = 5/132 (3%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKP-----KG 284
GP+G G G K KGP+ G + G+ + LP G V P KG
Sbjct: 1108 GPQGPPGPAGEKGAPGEKGPQ--------GPAGRDGLQGPVGLPGPAGPVGPPGEDGDKG 1159
Query: 285 EIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADID 464
EI G+ + + P +GPIG G + + + +G +G G KG +
Sbjct: 1160 EIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRG 1219
Query: 465 LKGPKLDVDLKG 500
GP V L+G
Sbjct: 1220 FPGPPGPVGLQG 1231
Score = 37.0 bits (84), Expect = 0.071
Identities = 36/129 (27%), Positives = 49/129 (37%), Gaps = 1/129 (0%)
Frame = +3
Query: 96 PHVDIDLKGPKGDIGLKGPKADIDLKGPKLDADFD-VDGKKKKHGIDLGINLPSFGGKVK 272
P L GP G +G G D +GP DG G L + GG
Sbjct: 473 PEGPAGLPGPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDA 532
Query: 273 KPKGEIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPK 452
KG + + A A L + + L+GP G G + + GP G GLKG
Sbjct: 533 GSKGPMVSAQESQAQAILQQAR----LALRGPAGPMGLTGRPGPV---GPPGSGGLKGEP 585
Query: 453 ADIDLKGPK 479
D+ +GP+
Sbjct: 586 GDVGPQGPR 594
Score = 36.6 bits (83), Expect = 0.093
Identities = 31/121 (25%), Positives = 43/121 (35%)
Frame = +3
Query: 117 KGPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDL 296
KG KGD G +GP +GP +G PS P+G+ L
Sbjct: 1167 KGSKGDKGEQGPPGPTGPQGP------------------IGQPGPSGADGEPGPRGQQGL 1208
Query: 297 DLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGP 476
G + P + L+G G G + D+ GP G G +GP GP
Sbjct: 1209 FGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGP 1268
Query: 477 K 479
+
Sbjct: 1269 Q 1269
Score = 36.6 bits (83), Expect = 0.093
Identities = 41/128 (32%), Positives = 48/128 (37%), Gaps = 1/128 (0%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPK-LDADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDL 296
GP+G G KG K + L+GP G K G D +P P GE L
Sbjct: 1399 GPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPG-------PVGEQGL 1451
Query: 297 DLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGP 476
+ G D P LKG G G I L GP G+ G KG D L GP
Sbjct: 1452 PGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKG---DRGLPGP 1508
Query: 477 KLDVDLKG 500
+ KG
Sbjct: 1509 QGSSGPKG 1516
Score = 36.2 bits (82), Expect = 0.12
Identities = 37/133 (27%), Positives = 49/133 (36%), Gaps = 6/133 (4%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPK----LDADFDVDGKKKKHGIDLGINLPSFGGK--VKKPK 281
G KG G GP+ I GP+ D + G K + G D P F G +K +
Sbjct: 772 GEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGED---GFPGFKGDMGIKGDR 828
Query: 282 GEIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADI 461
GEI G D +GP G G N + G KG +G+ G
Sbjct: 829 GEIGPPGPRGEDGP------------EGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYP 876
Query: 462 DLKGPKLDVDLKG 500
+GPK + G
Sbjct: 877 GRQGPKGSIGFPG 889
Score = 35.0 bits (79), Expect = 0.27
Identities = 55/233 (23%), Positives = 74/233 (31%), Gaps = 6/233 (2%)
Frame = +3
Query: 114 LKGPKGDIGLKGPKADIDLKG----PKLDADFDVDGKKKKHGIDLGINLPSFGGK--VKK 275
L+G GD GL GP + LKG P G++ G I +P G
Sbjct: 1055 LRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPG 1114
Query: 276 PKGEIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKA 455
P GE G + L GP G G ++ D KG G+ G KG K
Sbjct: 1115 PAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGD---KGEIGEPGQKGSKG 1171
Query: 456 DIDLKGPKLDVDLKGXXXXXXXXXXXXXXXXXXXXXXXXXXHGIDLGFNLPSFGAKMKKP 635
D +GP +G +G PS P
Sbjct: 1172 DKGEQGPPGPTGPQG-----------------------------PIGQPGPSGADGEPGP 1202
Query: 636 KGEIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDSKGPKGDIG 794
+G+ L G + P + L+G G G + D+ GP G G
Sbjct: 1203 RGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPG 1255
Score = 33.1 bits (74), Expect = 1.0
Identities = 39/156 (25%), Positives = 54/156 (34%)
Frame = +3
Query: 33 PKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKLDADFDVDGK 212
P G +D G N+ + +G G GL GP+ I G K G
Sbjct: 695 PPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEK--------GP 746
Query: 213 KKKHGIDLGINLPSFGGKVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNS 392
K G+ +P G P G + G P I GP G G +
Sbjct: 747 LGKPGLP---GMPGADG----PPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADG 799
Query: 393 KNADIDLKGPKGDIGLKGPKADIDLKGPKLDVDLKG 500
KG KG+ G G K D+ +KG + ++ G
Sbjct: 800 IRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPG 835
Score = 30.4 bits (67), Expect = 6.7
Identities = 36/134 (26%), Positives = 46/134 (34%), Gaps = 7/134 (5%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPK-------LDADFDVDGKKKKHGIDLGINLPSFGGKVKKP 278
GP G+ G GP+ GPK D G++ + G P G V P
Sbjct: 943 GPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVG-P 1001
Query: 279 KGEIDLDLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKAD 458
+G G + P + L G G G L G G GL+G D
Sbjct: 1002 QGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGD 1061
Query: 459 IDLKGPKLDVDLKG 500
L GP + LKG
Sbjct: 1062 RGLPGPVGALGLKG 1075
Score = 30.4 bits (67), Expect = 6.7
Identities = 37/126 (29%), Positives = 44/126 (34%), Gaps = 6/126 (4%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDLD 299
GP GD G G GP + G K G G P K KGE L+
Sbjct: 1360 GPPGDKGDDGEPGQTGSPGPT--GEPGPSGPPGKRGPP-GPAGPEGRQGEKGAKGEAGLE 1416
Query: 300 LNAGADANLDIK----KPHVD--IDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADI 461
G + + KP D + GP+G+ G GP G GL G K D
Sbjct: 1417 GPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDS 1476
Query: 462 DLKGPK 479
KG K
Sbjct: 1477 GPKGEK 1482
Score = 30.4 bits (67), Expect = 6.7
Identities = 41/145 (28%), Positives = 55/145 (37%), Gaps = 7/145 (4%)
Frame = +3
Query: 63 AGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGI 242
AG + K + L+GP G G GP+ GP D + G + G+ G
Sbjct: 1398 AGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGP--DGLRGIPGPVGEQGLP-GS 1454
Query: 243 NLPSFGGKVKKPKGEIDLDLNAGADANLDIKKPHVD-IDLKGPIGDNGFNSKNADIDL-- 413
P P G L ++G +K H I L GP G+ G + D L
Sbjct: 1455 PGPDGPPGPMGPPGLPGLKGDSGPKG----EKGHPGLIGLIGPPGEQG---EKGDRGLPG 1507
Query: 414 ----KGPKGDIGLKGPKADIDLKGP 476
GPKG+ G+ GP I GP
Sbjct: 1508 PQGSSGPKGEQGITGPSGPIGPPGP 1532
Score = 30.4 bits (67), Expect = 6.7
Identities = 36/119 (30%), Positives = 44/119 (36%)
Frame = +3
Query: 120 GPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDLD 299
GP G GL G K D GPK G+K G+ I P G+ K +G
Sbjct: 1462 GPMGPPGLPGLKGD---SGPK--------GEKGHPGLIGLIGPPGEQGE-KGDRGLPGPQ 1509
Query: 300 LNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGP 476
++G I P GPIG G KG KG G GP+ + GP
Sbjct: 1510 GSSGPKGEQGITGP------SGPIGPPGPPGLPGPPGPKGAKGSSGPTGPRGEAGHPGP 1562
Score = 30.0 bits (66), Expect = 8.7
Identities = 34/128 (26%), Positives = 41/128 (32%)
Frame = +3
Query: 117 KGPKGDIGLKGPKADIDLKGPKLDADFDVDGKKKKHGIDLGINLPSFGGKVKKPKGEIDL 296
KG GD+G GP +GP G G GI P G+ +P GE
Sbjct: 1239 KGETGDVGQMGPPGPPGPRGPS-----GAPGADGPQGPPGGIGNPGAVGEKGEP-GEAGE 1292
Query: 297 DLNAGADANLDIKKPHVDIDLKGPIGDNGFNSKNADIDLKGPKGDIGLKGPKADIDLKGP 476
+G GP G G + + G G G KGP D KG
Sbjct: 1293 PGPSGRS---------------GPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGS 1337
Query: 477 KLDVDLKG 500
V G
Sbjct: 1338 PGPVGFPG 1345
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,554,748
Number of Sequences: 369166
Number of extensions: 1863195
Number of successful extensions: 11511
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8225
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8582957970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)