Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_N11
(696 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P92176|ACT2_LUMTE Actin-2 427 e-119
sp|P10984|ACT2_CAEEL Actin-2 427 e-119
sp|Q26065|ACT_PLAMG Actin, adductor muscle 427 e-119
sp|P53464|ACTM_HELTB Actin, cytoskeletal (M) 427 e-119
sp|P53463|ACTM_HELER Actin, cytoskeletal (M) 427 e-119
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 426 e-119
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 426 e-119
sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic 426 e-119
sp|O16808|ACT_MAYDE Actin 426 e-119
sp|O93400|ACTB_XENLA Actin, cytoplasmic 1 (Beta-actin) (Cyt... 426 e-119
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 427 bits (1098), Expect = e-119
Identities = 209/215 (97%), Positives = 213/215 (99%)
Frame = +3
Query: 3 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 182
DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 183 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 362
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 363 FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 542
FETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 543 DLTDYLMKILTERGYSFTTTAERDIVRDIRENLLH 647
DLTDYLMKILTERGYSFTTTAER+IVRDI+E L +
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 219
Score = 34.3 bits (77), Expect = 0.32
Identities = 19/31 (61%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +1
Query: 607 REIS*EISERTCYIALDLMQN-ETASASSSL 696
REI +I E+ CY+ALD Q TASASSSL
Sbjct: 207 REIVRDIKEKLCYVALDFEQEMNTASASSSL 237
>sp|P10984|ACT2_CAEEL Actin-2
Length = 376
Score = 427 bits (1097), Expect = e-119
Identities = 209/215 (97%), Positives = 212/215 (98%)
Frame = +3
Query: 3 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 182
DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 183 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 362
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 363 FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 542
FETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 543 DLTDYLMKILTERGYSFTTTAERDIVRDIRENLLH 647
DLTDYLMKILTERGYSFTTTAER+IVRDI+E L +
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 219
Score = 32.0 bits (71), Expect = 1.6
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 607 REIS*EISERTCYIALDLMQNETASASSS 693
REI +I E+ CY+ALD Q +ASSS
Sbjct: 207 REIVRDIKEKLCYVALDFEQEMATAASSS 235
>sp|Q26065|ACT_PLAMG Actin, adductor muscle
Length = 376
Score = 427 bits (1097), Expect = e-119
Identities = 209/215 (97%), Positives = 213/215 (99%)
Frame = +3
Query: 3 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 182
+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 183 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 362
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 363 FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 542
FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 543 DLTDYLMKILTERGYSFTTTAERDIVRDIRENLLH 647
DLTDYLMKILTERGYSFTTTAER+IVRDI+E L +
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 219
Score = 32.0 bits (71), Expect = 1.6
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 607 REIS*EISERTCYIALDLMQNETASASSS 693
REI +I E+ CY+ALD +NE A+A+SS
Sbjct: 207 REIVRDIKEKLCYVALD-FENEMATAASS 234
>sp|P53464|ACTM_HELTB Actin, cytoskeletal (M)
Length = 376
Score = 427 bits (1097), Expect = e-119
Identities = 209/215 (97%), Positives = 213/215 (99%)
Frame = +3
Query: 3 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 182
+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 183 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 362
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 363 FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 542
FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 543 DLTDYLMKILTERGYSFTTTAERDIVRDIRENLLH 647
DLTDYLMKILTERGYSFTTTAER+IVRDI+E L +
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 219
Score = 31.2 bits (69), Expect = 2.7
Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 607 REIS*EISERTCYIALDLMQN-ETASASSSL 696
REI +I E+ CY ALD Q TA+ASSSL
Sbjct: 207 REIVRDIKEKLCYTALDFEQEMATAAASSSL 237
>sp|P53463|ACTM_HELER Actin, cytoskeletal (M)
Length = 376
Score = 427 bits (1097), Expect = e-119
Identities = 209/215 (97%), Positives = 213/215 (99%)
Frame = +3
Query: 3 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 182
+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 183 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 362
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 363 FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 542
FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 543 DLTDYLMKILTERGYSFTTTAERDIVRDIRENLLH 647
DLTDYLMKILTERGYSFTTTAER+IVRDI+E L +
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 219
Score = 30.8 bits (68), Expect = 3.6
Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 607 REIS*EISERTCYIALDLMQN-ETASASSSL 696
REI +I E+ CY ALD Q TA+ASSSL
Sbjct: 207 REIVRDIKEKLCYSALDFEQEMATAAASSSL 237
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 426 bits (1095), Expect = e-119
Identities = 208/215 (96%), Positives = 212/215 (98%)
Frame = +3
Query: 3 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 182
DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 183 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 362
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 363 FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 542
FETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGR
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGR 184
Query: 543 DLTDYLMKILTERGYSFTTTAERDIVRDIRENLLH 647
DLTDYLMKILTERGYSFTTTAER+IVRDI+E L +
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 219
Score = 33.5 bits (75), Expect = 0.55
Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +1
Query: 607 REIS*EISERTCYIALDLMQN-ETASASSSL 696
REI +I E+ CY+ALD Q +TAS SSSL
Sbjct: 207 REIVRDIKEKLCYVALDFEQEMQTASTSSSL 237
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 426 bits (1095), Expect = e-119
Identities = 208/215 (96%), Positives = 212/215 (98%)
Frame = +3
Query: 3 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 182
DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 183 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 362
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 363 FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 542
FETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGR
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGR 184
Query: 543 DLTDYLMKILTERGYSFTTTAERDIVRDIRENLLH 647
DLTDYLMKILTERGYSFTTTAER+IVRDI+E L +
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 219
Score = 32.7 bits (73), Expect = 0.94
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 607 REIS*EISERTCYIALDLMQN-ETASASSSL 696
REI +I E+ CY+ALD Q +TA++SSSL
Sbjct: 207 REIVRDIKEKLCYVALDFEQEMQTATSSSSL 237
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
Length = 376
Score = 426 bits (1095), Expect = e-119
Identities = 208/215 (96%), Positives = 212/215 (98%)
Frame = +3
Query: 3 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 182
DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 183 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 362
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 363 FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 542
FETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGR
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGR 184
Query: 543 DLTDYLMKILTERGYSFTTTAERDIVRDIRENLLH 647
DLTDYLMKILTERGYSFTTTAER+IVRDI+E L +
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 219
Score = 31.6 bits (70), Expect = 2.1
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 607 REIS*EISERTCYIALDLMQN-ETASASSSL 696
REI +I E+ CY+ALD Q TA+ SSSL
Sbjct: 207 REIVRDIKEKLCYVALDFEQEMHTAATSSSL 237
>sp|O16808|ACT_MAYDE Actin
Length = 376
Score = 426 bits (1095), Expect = e-119
Identities = 208/213 (97%), Positives = 212/213 (99%)
Frame = +3
Query: 3 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 182
+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 183 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 362
ILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 65 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 363 FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 542
FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 543 DLTDYLMKILTERGYSFTTTAERDIVRDIRENL 641
DLTDYLMKILTERGYSFTTTAER+IVRDI+E L
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 217
>sp|O93400|ACTB_XENLA Actin, cytoplasmic 1 (Beta-actin) (Cytoplasmic beta actin)
Length = 375
Score = 426 bits (1094), Expect = e-119
Identities = 207/215 (96%), Positives = 212/215 (98%)
Frame = +3
Query: 3 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 182
D+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 4 DIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 63
Query: 183 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 362
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 64 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 123
Query: 363 FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 542
FETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGR
Sbjct: 124 FETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGR 183
Query: 543 DLTDYLMKILTERGYSFTTTAERDIVRDIRENLLH 647
DLTDYLMKILTERGYSFTTTAER+IVRDI+E L +
Sbjct: 184 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 218
Score = 32.0 bits (71), Expect = 1.6
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 607 REIS*EISERTCYIALDLMQNETASASSS 693
REI +I E+ CY+ALD Q +ASSS
Sbjct: 206 REIVRDIKEKLCYVALDFEQEMATAASSS 234
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,169,317
Number of Sequences: 369166
Number of extensions: 1717638
Number of successful extensions: 6234
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6139
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6024953540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)