Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_M21
(897 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 536 e-152
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 536 e-152
sp|Q964D9|ACTC_HELTI Actin, cytoplasmic 535 e-152
sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic 535 e-152
sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic 535 e-152
sp|P92176|ACT2_LUMTE Actin-2 535 e-152
sp|P12716|ACTC_PISOC Actin, cytoplasmic 534 e-151
sp|P92179|ACTC_BIOGL Actin, cytoplasmic 534 e-151
sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3) 534 e-151
sp|P30163|ACT2_ONCVO Actin-2 534 e-151
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 536 bits (1380), Expect = e-152
Identities = 261/281 (92%), Positives = 271/281 (96%)
Frame = +3
Query: 27 KEGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 206
K GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 207 QIMFETFNAPAMYVAIQAVLSLYASG*TTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 386
QIMFETFN PAMYVAIQAVLSLYASG TTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDL
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDL 181
Query: 387 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSY 566
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSY
Sbjct: 182 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSY 241
Query: 567 ELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLS 746
ELPDGQVITIGNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLS
Sbjct: 242 ELPDGQVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLS 301
Query: 747 GGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERSIPVWI 869
GGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPER VWI
Sbjct: 302 GGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWI 342
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 536 bits (1380), Expect = e-152
Identities = 261/281 (92%), Positives = 272/281 (96%)
Frame = +3
Query: 27 KEGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 206
K GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 207 QIMFETFNAPAMYVAIQAVLSLYASG*TTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 386
QIMFETFN PAMYVAIQAVLSLYASG TTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDL
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDL 181
Query: 387 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSY 566
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSY
Sbjct: 182 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSY 241
Query: 567 ELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLS 746
ELPDGQVITIGNERFRCPEALFQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLS
Sbjct: 242 ELPDGQVITIGNERFRCPEALFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLS 301
Query: 747 GGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERSIPVWI 869
GGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPER VWI
Sbjct: 302 GGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWI 342
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
Length = 376
Score = 535 bits (1378), Expect = e-152
Identities = 260/281 (92%), Positives = 271/281 (96%)
Frame = +3
Query: 27 KEGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 206
K GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 207 QIMFETFNAPAMYVAIQAVLSLYASG*TTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 386
QIMFETFN PAMYVAIQAVLSLYASG TTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDL
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVIDSGDGVTHTVPIYEGYALPHAIMRLDL 181
Query: 387 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSY 566
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSY
Sbjct: 182 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSY 241
Query: 567 ELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLS 746
ELPDGQVITIGNERFRCPEA++QPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLS
Sbjct: 242 ELPDGQVITIGNERFRCPEAMYQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS 301
Query: 747 GGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERSIPVWI 869
GGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPER VWI
Sbjct: 302 GGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWI 342
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
Length = 376
Score = 535 bits (1378), Expect = e-152
Identities = 261/281 (92%), Positives = 270/281 (96%)
Frame = +3
Query: 27 KEGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 206
K GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 207 QIMFETFNAPAMYVAIQAVLSLYASG*TTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 386
QIMFETFN PAMYVAIQAVLSLYASG TTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDL
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDL 181
Query: 387 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSY 566
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA+ SSSLEKSY
Sbjct: 182 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAATSSSLEKSY 241
Query: 567 ELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLS 746
ELPDGQVITIGNERFRCPEA+FQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLS
Sbjct: 242 ELPDGQVITIGNERFRCPEAVFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS 301
Query: 747 GGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERSIPVWI 869
GGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPER VWI
Sbjct: 302 GGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWI 342
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
Length = 376
Score = 535 bits (1378), Expect = e-152
Identities = 260/281 (92%), Positives = 271/281 (96%)
Frame = +3
Query: 27 KEGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 206
K GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 207 QIMFETFNAPAMYVAIQAVLSLYASG*TTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 386
QIMFETFN PAMYVAIQAVLSLYASG TTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDL
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDL 181
Query: 387 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSY 566
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSY
Sbjct: 182 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSY 241
Query: 567 ELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLS 746
ELPDGQVITIGNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLS
Sbjct: 242 ELPDGQVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLS 301
Query: 747 GGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERSIPVWI 869
GGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPER VWI
Sbjct: 302 GGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWI 342
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 535 bits (1377), Expect = e-152
Identities = 262/281 (93%), Positives = 271/281 (96%)
Frame = +3
Query: 27 KEGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 206
K GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 207 QIMFETFNAPAMYVAIQAVLSLYASG*TTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 386
QIMFETFN+PAMYVAIQAVLSLYASG TTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
Query: 387 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSY 566
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TASASSSLEKSY
Sbjct: 182 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMNTASASSSLEKSY 241
Query: 567 ELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLS 746
ELPDGQVITIGNERFRCPEA+F SFLG+ESVGIHETTYNSIMKCDVDIRKDLYAN VLS
Sbjct: 242 ELPDGQVITIGNERFRCPEAMFHASFLGMESVGIHETTYNSIMKCDVDIRKDLYANTVLS 301
Query: 747 GGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERSIPVWI 869
GG+TM+PGIADRMQKEI+ALAPPTMKIKI+APPER VWI
Sbjct: 302 GGTTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWI 342
>sp|P12716|ACTC_PISOC Actin, cytoplasmic
Length = 376
Score = 534 bits (1376), Expect = e-151
Identities = 260/281 (92%), Positives = 271/281 (96%)
Frame = +3
Query: 27 KEGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 206
K GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 207 QIMFETFNAPAMYVAIQAVLSLYASG*TTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 386
QIMFETFN PAMYVAIQAVLSLYASG TTGIV DSGDGV+HTVPIYEGYALPHAILRLDL
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDL 181
Query: 387 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSY 566
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSY
Sbjct: 182 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSY 241
Query: 567 ELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLS 746
ELPDGQVITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLS
Sbjct: 242 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS 301
Query: 747 GGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERSIPVWI 869
GGSTM+PGIADRMQKE++ALAPPTMKIKI+APPER VWI
Sbjct: 302 GGSTMFPGIADRMQKEVTALAPPTMKIKIIAPPERKYSVWI 342
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
Length = 376
Score = 534 bits (1375), Expect = e-151
Identities = 260/281 (92%), Positives = 270/281 (96%)
Frame = +3
Query: 27 KEGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 206
K GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 207 QIMFETFNAPAMYVAIQAVLSLYASG*TTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 386
QIMFETFN PAMYVAIQAVLSLYASG TTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDL
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDL 181
Query: 387 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSY 566
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSY
Sbjct: 182 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSY 241
Query: 567 ELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLS 746
ELPDGQVITIGNERFRCPEA FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLS
Sbjct: 242 ELPDGQVITIGNERFRCPEATFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLS 301
Query: 747 GGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERSIPVWI 869
GGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPER VWI
Sbjct: 302 GGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWI 342
>sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3)
Length = 375
Score = 534 bits (1375), Expect = e-151
Identities = 262/281 (93%), Positives = 270/281 (96%)
Frame = +3
Query: 27 KEGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 206
K GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 207 QIMFETFNAPAMYVAIQAVLSLYASG*TTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 386
QIMFETFN PAMYVAIQAVLSLYASG TTGIV+DSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
Query: 387 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSY 566
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TAS+SSSLEKSY
Sbjct: 181 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATASSSSSLEKSY 240
Query: 567 ELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLS 746
ELPDGQVITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLS
Sbjct: 241 ELPDGQVITIGNERFRCPEALFQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVLS 300
Query: 747 GGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERSIPVWI 869
GG+TMYPGIADRMQKEI+ALAP TMKIKI+APPER VWI
Sbjct: 301 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 341
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 534 bits (1375), Expect = e-151
Identities = 261/281 (92%), Positives = 270/281 (96%)
Frame = +3
Query: 27 KEGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 206
K GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 207 QIMFETFNAPAMYVAIQAVLSLYASG*TTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 386
QIMFETFN PAMYVAIQAVLSLYASG TTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
Query: 387 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSY 566
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSY
Sbjct: 182 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 241
Query: 567 ELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLS 746
ELPDGQVIT+GNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCD+DIRKDLYAN VLS
Sbjct: 242 ELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDIDIRKDLYANNVLS 301
Query: 747 GGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERSIPVWI 869
GGSTMYPGIADRMQKEI+ALAP TMKIKI+APPER VWI
Sbjct: 302 GGSTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 342
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,921,350
Number of Sequences: 369166
Number of extensions: 2100914
Number of successful extensions: 7259
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7114
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9030416440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)