Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_M15
(484 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P67962|KC1A_CHICK Casein kinase I, alpha isoform (CKI-al... 123 2e-28
sp|P48729|KC1A_HUMAN Casein kinase I, alpha isoform (CKI-al... 123 2e-28
sp|P67829|KC1A_SHEEP Casein kinase I, alpha isoform (CKI-al... 123 2e-28
sp|P97633|KC1A_RAT Casein kinase I, alpha isoform (CKI-alph... 123 2e-28
sp|Q8N752|KC1AL_HUMAN Casein kinase I, alpha-like isoform (... 122 6e-28
sp|P54367|KC1A_DROME Casein kinase I, alpha isoform (CKI-al... 116 3e-26
sp|P42168|YKL1_CAEEL Putative casein kinase I C03C10.1 in c... 111 1e-24
sp|Q06486|KC1D_RAT Casein kinase I, delta isoform (CKI-delt... 110 2e-24
sp|P48730|KC1D_HUMAN Casein kinase I, delta isoform (CKI-de... 110 2e-24
sp|P49674|KC1E_HUMAN Casein kinase I, epsilon isoform (CKI-... 108 5e-24
>sp|P67962|KC1A_CHICK Casein kinase I, alpha isoform (CKI-alpha) (CK1)
sp|P67963|KC1A_XENLA Casein kinase I, alpha isoform (CKI-alpha) (CK1)
Length = 337
Score = 123 bits (309), Expect = 2e-28
Identities = 60/93 (64%), Positives = 68/93 (73%)
Frame = +1
Query: 10 ANNKKQKYERIYEKKRSTPIEVLCKSFPPEFAFYLEYCRNLKFDEAPNYKSLRESFSNLF 189
A KKQKYE+I EKK STP+EVLCK FP EFA YL YCR L+F+EAP+Y LR+ F LF
Sbjct: 226 AATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 285
Query: 190 RTLNFAYDYVFDWTLLKQKAVGMQQQSHQCGGG 288
RTLN YDY FDWT+LKQKA QQ + G G
Sbjct: 286 RTLNHQYDYTFDWTMLKQKAA--QQAASSSGQG 316
>sp|P48729|KC1A_HUMAN Casein kinase I, alpha isoform (CKI-alpha) (CK1)
sp|Q8BK63|KC1A_MOUSE Casein kinase I, alpha isoform (CKI-alpha) (CK1)
Length = 337
Score = 123 bits (309), Expect = 2e-28
Identities = 60/93 (64%), Positives = 68/93 (73%)
Frame = +1
Query: 10 ANNKKQKYERIYEKKRSTPIEVLCKSFPPEFAFYLEYCRNLKFDEAPNYKSLRESFSNLF 189
A KKQKYE+I EKK STP+EVLCK FP EFA YL YCR L+F+EAP+Y LR+ F LF
Sbjct: 226 AATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 285
Query: 190 RTLNFAYDYVFDWTLLKQKAVGMQQQSHQCGGG 288
RTLN YDY FDWT+LKQKA QQ + G G
Sbjct: 286 RTLNHQYDYTFDWTMLKQKAA--QQAASSSGQG 316
>sp|P67829|KC1A_SHEEP Casein kinase I, alpha isoform (CKI-alpha) (CK1)
sp|P67828|KC1A_RABIT Casein kinase I, alpha isoform (CKI-alpha) (CK1)
sp|P67827|KC1A_BOVIN Casein kinase I, alpha isoform (CKI-alpha) (CK1)
Length = 325
Score = 123 bits (309), Expect = 2e-28
Identities = 60/93 (64%), Positives = 68/93 (73%)
Frame = +1
Query: 10 ANNKKQKYERIYEKKRSTPIEVLCKSFPPEFAFYLEYCRNLKFDEAPNYKSLRESFSNLF 189
A KKQKYE+I EKK STP+EVLCK FP EFA YL YCR L+F+EAP+Y LR+ F LF
Sbjct: 226 AATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 285
Query: 190 RTLNFAYDYVFDWTLLKQKAVGMQQQSHQCGGG 288
RTLN YDY FDWT+LKQKA QQ + G G
Sbjct: 286 RTLNHQYDYTFDWTMLKQKAA--QQAASSSGQG 316
>sp|P97633|KC1A_RAT Casein kinase I, alpha isoform (CKI-alpha) (CK1)
Length = 325
Score = 123 bits (309), Expect = 2e-28
Identities = 60/93 (64%), Positives = 68/93 (73%)
Frame = +1
Query: 10 ANNKKQKYERIYEKKRSTPIEVLCKSFPPEFAFYLEYCRNLKFDEAPNYKSLRESFSNLF 189
A KKQKYE+I EKK STP+EVLCK FP EFA YL YCR L+F+EAP+Y LR+ F LF
Sbjct: 226 AATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 285
Query: 190 RTLNFAYDYVFDWTLLKQKAVGMQQQSHQCGGG 288
RTLN YDY FDWT+LKQKA QQ + G G
Sbjct: 286 RTLNHQYDYTFDWTMLKQKAA--QQAASSSGQG 316
>sp|Q8N752|KC1AL_HUMAN Casein kinase I, alpha-like isoform (CKI-alpha-like) (CK1)
Length = 337
Score = 122 bits (305), Expect = 6e-28
Identities = 59/93 (63%), Positives = 67/93 (72%)
Frame = +1
Query: 10 ANNKKQKYERIYEKKRSTPIEVLCKSFPPEFAFYLEYCRNLKFDEAPNYKSLRESFSNLF 189
A KKQKYE+I EKK STP+EVLCK FP EFA YL YCR L+F+E P+Y LR+ F LF
Sbjct: 226 AMTKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEVPDYMYLRQLFRILF 285
Query: 190 RTLNFAYDYVFDWTLLKQKAVGMQQQSHQCGGG 288
RTLN YDY FDWT+LKQKA QQ + G G
Sbjct: 286 RTLNHQYDYTFDWTMLKQKAA--QQAASSSGQG 316
>sp|P54367|KC1A_DROME Casein kinase I, alpha isoform (CKI-alpha) (DmCK1)
Length = 337
Score = 116 bits (290), Expect = 3e-26
Identities = 52/79 (65%), Positives = 63/79 (79%)
Frame = +1
Query: 10 ANNKKQKYERIYEKKRSTPIEVLCKSFPPEFAFYLEYCRNLKFDEAPNYKSLRESFSNLF 189
AN K+QKYE+I EKK STPIEVLCK P EF+ YL YCR+L+F+E P+Y LR+ F LF
Sbjct: 229 ANTKQQKYEKISEKKMSTPIEVLCKGSPAEFSMYLNYCRSLRFEEQPDYMYLRQLFRILF 288
Query: 190 RTLNFAYDYVFDWTLLKQK 246
RTLN YDY++DWT+LKQK
Sbjct: 289 RTLNHQYDYIYDWTMLKQK 307
>sp|P42168|YKL1_CAEEL Putative casein kinase I C03C10.1 in chromosome III
Length = 341
Score = 111 bits (277), Expect = 1e-24
Identities = 56/94 (59%), Positives = 64/94 (68%)
Frame = +1
Query: 10 ANNKKQKYERIYEKKRSTPIEVLCKSFPPEFAFYLEYCRNLKFDEAPNYKSLRESFSNLF 189
A KKQKYE+I EKK +T +E LCK FP EF YL Y R L+FDE+P+Y LR+ F LF
Sbjct: 225 AATKKQKYEKISEKKMTTSVEHLCKGFPAEFPMYLSYTRGLRFDESPDYMYLRQLFRILF 284
Query: 190 RTLNFAYDYVFDWTLLKQKAVGMQQQSHQCGGGG 291
RTLN YDY FDWT+LKQKA QQS G G
Sbjct: 285 RTLNHQYDYTFDWTMLKQKA----QQSQSSGVPG 314
>sp|Q06486|KC1D_RAT Casein kinase I, delta isoform (CKI-delta)
sp|Q9DC28|KC1D_MOUSE Casein kinase I, delta isoform (CKI-delta) (CKId)
Length = 415
Score = 110 bits (274), Expect = 2e-24
Identities = 49/77 (63%), Positives = 59/77 (76%)
Frame = +1
Query: 10 ANNKKQKYERIYEKKRSTPIEVLCKSFPPEFAFYLEYCRNLKFDEAPNYKSLRESFSNLF 189
A K+QKYERI EKK STPIEVLCK +P EFA YL +CR+L+FD+ P+Y LR+ F NLF
Sbjct: 218 AATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 277
Query: 190 RTLNFAYDYVFDWTLLK 240
F+YDYVFDW +LK
Sbjct: 278 HRQGFSYDYVFDWNMLK 294
>sp|P48730|KC1D_HUMAN Casein kinase I, delta isoform (CKI-delta) (CKId)
Length = 415
Score = 110 bits (274), Expect = 2e-24
Identities = 49/77 (63%), Positives = 59/77 (76%)
Frame = +1
Query: 10 ANNKKQKYERIYEKKRSTPIEVLCKSFPPEFAFYLEYCRNLKFDEAPNYKSLRESFSNLF 189
A K+QKYERI EKK STPIEVLCK +P EFA YL +CR+L+FD+ P+Y LR+ F NLF
Sbjct: 218 AATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 277
Query: 190 RTLNFAYDYVFDWTLLK 240
F+YDYVFDW +LK
Sbjct: 278 HRQGFSYDYVFDWNMLK 294
>sp|P49674|KC1E_HUMAN Casein kinase I, epsilon isoform (CKI-epsilon) (CKIe)
Length = 416
Score = 108 bits (271), Expect = 5e-24
Identities = 48/77 (62%), Positives = 59/77 (76%)
Frame = +1
Query: 10 ANNKKQKYERIYEKKRSTPIEVLCKSFPPEFAFYLEYCRNLKFDEAPNYKSLRESFSNLF 189
A K+QKYERI EKK STPIEVLCK +P EF+ YL +CR+L+FD+ P+Y LR+ F NLF
Sbjct: 218 AATKRQKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLF 277
Query: 190 RTLNFAYDYVFDWTLLK 240
F+YDYVFDW +LK
Sbjct: 278 HRQGFSYDYVFDWNMLK 294
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,295,242
Number of Sequences: 369166
Number of extensions: 981583
Number of successful extensions: 2903
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2895
length of database: 68,354,980
effective HSP length: 102
effective length of database: 49,512,010
effective search space used: 2871696580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)