Planarian EST Database


Dr_sW_027_M04

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_027_M04
         (816 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q28259|G3P_CANFA  Glyceraldehyde-3-phosphate dehydrogenas...   392   e-109
sp|Q9N2D5|G3P_FELCA  Glyceraldehyde-3-phosphate dehydrogenas...   391   e-108
sp|P46406|G3P_RABIT  Glyceraldehyde-3-phosphate dehydrogenas...   391   e-108
sp|P00355|G3P_PIG  Glyceraldehyde-3-phosphate dehydrogenase ...   390   e-108
sp|P10096|G3P_BOVIN  Glyceraldehyde-3-phosphate dehydrogenas...   386   e-107
sp|P04406|G3P2_HUMAN  Glyceraldehyde-3-phosphate dehydrogena...   384   e-106
sp|P51469|G3P_XENLA  Glyceraldehyde-3-phosphate dehydrogenas...   383   e-106
sp|P00356|G3P_CHICK  Glyceraldehyde-3-phosphate dehydrogenas...   383   e-106
sp|P16858|G3P_MOUSE  Glyceraldehyde-3-phosphate dehydrogenas...   382   e-106
sp|Q05025|G3P_COTJA  Glyceraldehyde-3-phosphate dehydrogenas...   382   e-106
>sp|Q28259|G3P_CANFA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
          Length = 333

 Score =  392 bits (1008), Expect = e-109
 Identities = 191/264 (72%), Positives = 221/264 (83%)
 Frame = +2

Query: 14  KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 193
           KVG+NGFGRIGRLV RAA   G VD+VA+NDPFI+L+YMVYMF+YDSTHGKFHG V+A++
Sbjct: 3   KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN 62

Query: 194 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 373
           GKLV++G ++S++ +R+P  I W      YVVESTGVFTT+EKA AH K   AK+V+ISA
Sbjct: 63  GKLVINGKSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121

Query: 374 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 553
           PSADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TA
Sbjct: 122 PSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITA 181

Query: 554 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVV 733
           TQKTVDGPS K+WRDGRGAAQNIIP            IPELNGK+TGMAFRVP P+VSVV
Sbjct: 182 TQKTVDGPSGKMWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241

Query: 734 DLTCKLKKAAKYDEIKAAIKHASE 805
           DLTC+L+KAAKYD+IK  +K ASE
Sbjct: 242 DLTCRLEKAAKYDDIKKVVKQASE 265
>sp|Q9N2D5|G3P_FELCA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
          Length = 333

 Score =  391 bits (1005), Expect = e-108
 Identities = 191/264 (72%), Positives = 220/264 (83%)
 Frame = +2

Query: 14  KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 193
           KVG+NGFGRIGRLV RAA   G VD+VA+NDPFI+L+YMVYMF+YDSTHGKFHG V+A++
Sbjct: 3   KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN 62

Query: 194 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 373
           GKLV++G  ++++ +R+P  I W      YVVESTGVFTT+EKA AH K   AK+V+ISA
Sbjct: 63  GKLVINGKPITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121

Query: 374 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 553
           PSADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TA
Sbjct: 122 PSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITA 181

Query: 554 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVV 733
           TQKTVDGPS KLWRDGRGAAQNIIP            IPELNGK+TGMAFRVP P+VSVV
Sbjct: 182 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241

Query: 734 DLTCKLKKAAKYDEIKAAIKHASE 805
           DLTC+L+KAAKYD+IK  +K ASE
Sbjct: 242 DLTCRLEKAAKYDDIKKVVKQASE 265
>sp|P46406|G3P_RABIT Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
          Length = 333

 Score =  391 bits (1004), Expect = e-108
 Identities = 192/264 (72%), Positives = 219/264 (82%)
 Frame = +2

Query: 14  KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 193
           KVG+NGFGRIGRLV RAA   G VDVVA+NDPFI+L YMVYMF+YDSTHGKFHG V+A++
Sbjct: 3   KVGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAEN 62

Query: 194 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 373
           GKLV++G A++++ +R+P  I W      YVVESTGVFTT+EKA AH K   AK+V+ISA
Sbjct: 63  GKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121

Query: 374 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 553
           PS DAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TA
Sbjct: 122 PSXDAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITA 181

Query: 554 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVV 733
           TQKTVDGPS KLWRDGRGAAQNIIP            IPELNGK+TGMAFRVP P+VSVV
Sbjct: 182 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241

Query: 734 DLTCKLKKAAKYDEIKAAIKHASE 805
           DLTC+L+KAAKYD+IK  +K ASE
Sbjct: 242 DLTCRLEKAAKYDDIKKVVKQASE 265
>sp|P00355|G3P_PIG Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
          Length = 333

 Score =  390 bits (1003), Expect = e-108
 Identities = 191/264 (72%), Positives = 219/264 (82%)
 Frame = +2

Query: 14  KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 193
           KVG+NGFGRIGRLV RAA   G VD+VA+NDPFI+L YMVYMF+YDSTHGKFHG V+A++
Sbjct: 3   KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAEN 62

Query: 194 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 373
           GKLV++G A++++ +R+P  I W      YVVESTGVFTT+EKA AH K   AK+V+ISA
Sbjct: 63  GKLVINGKAITIFQERDPANIKWGDAGATYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121

Query: 374 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 553
           PSADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TA
Sbjct: 122 PSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITA 181

Query: 554 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVV 733
           TQKTVDGPS KLWRDGRGAAQNIIP            IPELNGK+TGMAFRVP P+VSVV
Sbjct: 182 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241

Query: 734 DLTCKLKKAAKYDEIKAAIKHASE 805
           DLTC+L+K AKYD+IK  +K ASE
Sbjct: 242 DLTCRLEKPAKYDDIKKVVKQASE 265
>sp|P10096|G3P_BOVIN Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
          Length = 320

 Score =  386 bits (991), Expect = e-107
 Identities = 189/264 (71%), Positives = 219/264 (82%)
 Frame = +2

Query: 14  KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 193
           KVG+NGFGRIGRLV RAA   G VD+VA+NDPFI+L YMVYMF+YDSTHGKF+G V+A++
Sbjct: 2   KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFNGTVKAEN 61

Query: 194 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 373
           GKLV++G A++++ +R+P  I W      YVVESTGVFTT+EKA AH K   AK+V+ISA
Sbjct: 62  GKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 120

Query: 374 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 553
           PSADAPMFVMGVNHEKY+ +L IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TA
Sbjct: 121 PSADAPMFVMGVNHEKYNNTLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITA 180

Query: 554 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVV 733
           TQKTVDGPS KLWRDGRGAAQNIIP            IPELNGK+TGMAFRVP P+VSVV
Sbjct: 181 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 240

Query: 734 DLTCKLKKAAKYDEIKAAIKHASE 805
           DLTC+L+K AKYDEIK  +K ASE
Sbjct: 241 DLTCRLEKPAKYDEIKKVVKQASE 264
>sp|P04406|G3P2_HUMAN Glyceraldehyde-3-phosphate dehydrogenase, liver (GAPDH)
          Length = 335

 Score =  384 bits (986), Expect = e-106
 Identities = 187/268 (69%), Positives = 221/268 (82%)
 Frame = +2

Query: 2   MTKPKVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHV 181
           M K KVG+NGFGRIGRLV RAA   G VD+VA+NDPFI+L+YMVYMF+YDSTHGKFHG V
Sbjct: 1   MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTV 60

Query: 182 EAKDGKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKV 361
           +A++GKLV++G+ ++++ +R+P +I W      YVVESTGVFTT+EKA AH +   AK+V
Sbjct: 61  KAENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGG-AKRV 119

Query: 362 VISAPSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIH 541
           +ISAPSADAPMFVMGVNHEKYD SL I+SNASCTTNCLAPLAKV++D+FGI EGLMTT+H
Sbjct: 120 IISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVH 179

Query: 542 AYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPD 721
           A TATQKTVDGPS KLWRDGRGA QNIIP            IPELNGK+TGMAFRVP  +
Sbjct: 180 AITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTAN 239

Query: 722 VSVVDLTCKLKKAAKYDEIKAAIKHASE 805
           VSVVDLTC+L+K AKYD+IK  +K ASE
Sbjct: 240 VSVVDLTCRLEKPAKYDDIKKVVKQASE 267
>sp|P51469|G3P_XENLA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
          Length = 333

 Score =  383 bits (984), Expect = e-106
 Identities = 191/267 (71%), Positives = 218/267 (81%)
 Frame = +2

Query: 14  KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 193
           KVGINGFG IGRLV RAA + G V VVA+NDPFI+LDYMVYMFKYDSTHG+F G V+A++
Sbjct: 3   KVGINGFGCIGRLVTRAAFDSGKVQVVAINDPFIDLDYMVYMFKYDSTHGRFKGTVKAEN 62

Query: 194 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 373
           GKL+++   ++V+ +R+P  I W      YVVESTGVFTT EKAS H K   AK+VVISA
Sbjct: 63  GKLIINDQVITVFQERDPSSIKWGDAGAVYVVESTGVFTTTEKASLHLKGG-AKRVVISA 121

Query: 374 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 553
           PSADAPMFV+GVNHEKY+ SL +VSNASCTTNCLAPLAKV+ND+FGI EGLMTT+HA+TA
Sbjct: 122 PSADAPMFVVGVNHEKYENSLKVVSNASCTTNCLAPLAKVINDNFGIVEGLMTTVHAFTA 181

Query: 554 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVV 733
           TQKTVDGPS KLWRDGRGA QNIIP            IPELNGKITGMAFRVP P+VSVV
Sbjct: 182 TQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKITGMAFRVPTPNVSVV 241

Query: 734 DLTCKLKKAAKYDEIKAAIKHASETTM 814
           DLTC+L+K AKYD+IKAAIK ASE  M
Sbjct: 242 DLTCRLQKPAKYDDIKAAIKTASEGPM 268
>sp|P00356|G3P_CHICK Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
          Length = 333

 Score =  383 bits (983), Expect = e-106
 Identities = 188/264 (71%), Positives = 219/264 (82%)
 Frame = +2

Query: 14  KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 193
           KVG+NGFGRIGRLV RAA+  G V VVA+NDPFI+L+YMVYMFKYDSTHG F G V+A++
Sbjct: 3   KVGVNGFGRIGRLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFKGTVKAEN 62

Query: 194 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 373
           GKLV++GHA++++ +R+P  I W      YVVESTGVFTT+EKA AH K   AK+V+ISA
Sbjct: 63  GKLVINGHAITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121

Query: 374 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 553
           PSADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TA
Sbjct: 122 PSADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITA 181

Query: 554 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVV 733
           TQKTVDGPS KLWRDGRGAAQNIIP            IPELNGK+TGMAFRVP P+VSVV
Sbjct: 182 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241

Query: 734 DLTCKLKKAAKYDEIKAAIKHASE 805
           DLTC+L+K AKYD+IK  +K A++
Sbjct: 242 DLTCRLEKPAKYDDIKRVVKAAAD 265
>sp|P16858|G3P_MOUSE Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
          Length = 333

 Score =  382 bits (982), Expect = e-106
 Identities = 187/264 (70%), Positives = 220/264 (83%)
 Frame = +2

Query: 14  KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 193
           KVG+NGFGRIGRLV RAA+  G V++VA+NDPFI+L+YMVYMF+YDSTHGKF+G V+A++
Sbjct: 3   KVGVNGFGRIGRLVTRAAICSGKVEIVAINDPFIDLNYMVYMFQYDSTHGKFNGTVKAEN 62

Query: 194 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 373
           GKLV++G  ++++ +R+P  I W      YVVESTGVFTT+EKA AH K   AK+V+ISA
Sbjct: 63  GKLVINGKPITIFQERDPTNIKWGEAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121

Query: 374 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 553
           PSADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TA
Sbjct: 122 PSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITA 181

Query: 554 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVV 733
           TQKTVDGPS KLWRDGRGAAQNIIP            IPELNGK+TGMAFRVP P+VSVV
Sbjct: 182 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241

Query: 734 DLTCKLKKAAKYDEIKAAIKHASE 805
           DLTC+L+K AKYD+IK  +K ASE
Sbjct: 242 DLTCRLEKPAKYDDIKKVVKQASE 265
>sp|Q05025|G3P_COTJA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
          Length = 333

 Score =  382 bits (980), Expect = e-106
 Identities = 188/264 (71%), Positives = 219/264 (82%)
 Frame = +2

Query: 14  KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 193
           KVG+NGFGRIGRLV RAA+  G V VVA+NDPFI+L+YMVYMFKYDSTHG F G V+A++
Sbjct: 3   KVGVNGFGRIGRLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFKGTVKAEN 62

Query: 194 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 373
           GKLV++G+A++++ +R+P  I W      YVVESTGVFTT+EKA AH K   AK+V+ISA
Sbjct: 63  GKLVINGNAITIFQERDPSNIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121

Query: 374 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 553
           PSADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TA
Sbjct: 122 PSADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITA 181

Query: 554 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVV 733
           TQKTVDGPS KLWRDGRGAAQNIIP            IPELNGK+TGMAFRVP P+VSVV
Sbjct: 182 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241

Query: 734 DLTCKLKKAAKYDEIKAAIKHASE 805
           DLTC+L+K AKYD+IK  +K A+E
Sbjct: 242 DLTCRLEKPAKYDDIKRVVKAAAE 265
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,462,544
Number of Sequences: 369166
Number of extensions: 1982666
Number of successful extensions: 5862
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5409
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7811456130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)