Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_L15
(699 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8VDD5|MYH9_MOUSE Myosin-9 (Myosin heavy chain, nonmuscl... 102 1e-21
sp|P35579|MYH9_HUMAN Myosin-9 (Myosin heavy chain, nonmuscl... 101 2e-21
sp|Q62812|MYH9_RAT Myosin-9 (Myosin heavy chain, nonmuscle ... 100 3e-21
sp|P35749|MYH11_HUMAN Myosin-11 (Myosin heavy chain, smooth... 100 6e-21
sp|P14105|MYH9_CHICK Myosin-9 (Myosin heavy chain, nonmuscl... 99 8e-21
sp|P10587|MYH11_CHICK Myosin-11 (Myosin heavy chain, gizzar... 98 2e-20
sp|P35748|MYH11_RABIT Myosin-11 (Myosin heavy chain, smooth... 97 3e-20
sp|O08638|MYH11_MOUSE Myosin-11 (Myosin heavy chain, smooth... 95 2e-19
sp|Q61879|MYH10_MOUSE Myosin-10 (Myosin heavy chain, nonmus... 95 2e-19
sp|Q9JLT0|MYH10_RAT Myosin-10 (Myosin heavy chain, nonmuscl... 95 2e-19
>sp|Q8VDD5|MYH9_MOUSE Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle myosin heavy
chain IIa) (NMMHC II-a) (NMMHC-IIA) (Cellular myosin
heavy chain, type A) (Nonmuscle myosin heavy chain-A)
(NMMHC-A)
Length = 1960
Score = 102 bits (253), Expect = 1e-21
Identities = 57/199 (28%), Positives = 99/199 (49%)
Frame = +3
Query: 3 KRIESNLSALNMDYXXXXXXXXXXXDKNKKVTNQLEQVQNELNVERQNATRLENQKSTAE 182
+R+E+ ++ L + D+ KK Q++Q+ +LN+ER +A + EN + E
Sbjct: 1725 RRLEARIALLEEELEEEQGNTELINDRLKKANLQIDQINTDLNLERSHAQKNENARQQLE 1784
Query: 183 RLNXXXXXXXXXXXXXTGKKYKATVSAQQIKIQSLDAQLDAKIEEINQAXXXXXXXXXXX 362
R N KYKA+++A + KI L+ QLD + +E A
Sbjct: 1785 RQNKELKAKLQEMESAVKSKYKASIAALEAKIAQLEEQLDNETKERQAASKQVRRTEKKL 1844
Query: 363 XXIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQRDLEEVN 542
++ + DE+R A+ +Q +KA+ R K+ +R L+ +E R+LQR+LE+
Sbjct: 1845 KDVLLQVEDERRNAEQFKDQADKASTRLKQLKRQLEEAEEEAQRANASRRKLQRELEDAT 1904
Query: 543 ETKEARDQEIKVLKTKVER 599
ET +A ++E+ LK K+ R
Sbjct: 1905 ETADAMNREVSSLKNKLRR 1923
Score = 32.3 bits (72), Expect = 1.2
Identities = 27/128 (21%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Frame = +3
Query: 255 VSAQQIKIQSLDAQLDAKIEEINQAXXXXXXXXXXXXXIMALMVDEQRRADNAIEQIEKA 434
++ Q +I L QL K EE+ A +A + +E + + A+++I +
Sbjct: 1064 IAELQAQIAELKMQLAKKEEELQAA--------------LARVEEEAAQKNMALKKIREL 1109
Query: 435 TGRYKKAERSLQMEQENNSALTTQNRRLQRDLEEVN--------------ETKEARDQEI 572
+ + + L+ E+ + + Q R L +LE + E + R+QE+
Sbjct: 1110 ETQISELQEDLESERASRNKAEKQKRDLGEELEALKTELEDTLDSTAAQQELRSKREQEV 1169
Query: 573 KVLKTKVE 596
+LK +E
Sbjct: 1170 SILKKTLE 1177
>sp|P35579|MYH9_HUMAN Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle myosin heavy
chain IIa) (NMMHC II-a) (NMMHC-IIA) (Cellular myosin
heavy chain, type A) (Nonmuscle myosin heavy chain-A)
(NMMHC-A)
Length = 1960
Score = 101 bits (252), Expect = 2e-21
Identities = 57/199 (28%), Positives = 99/199 (49%)
Frame = +3
Query: 3 KRIESNLSALNMDYXXXXXXXXXXXDKNKKVTNQLEQVQNELNVERQNATRLENQKSTAE 182
+R+E+ ++ L + D+ KK Q++Q+ +LN+ER +A + EN + E
Sbjct: 1725 RRLEARIAQLEEELEEEQGNTELINDRLKKANLQIDQINTDLNLERSHAQKNENARQQLE 1784
Query: 183 RLNXXXXXXXXXXXXXTGKKYKATVSAQQIKIQSLDAQLDAKIEEINQAXXXXXXXXXXX 362
R N KYKA+++A + KI L+ QLD + +E A
Sbjct: 1785 RQNKELKVKLQEMEGTVKSKYKASITALEAKIAQLEEQLDNETKERQAACKQVRRTEKKL 1844
Query: 363 XXIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQRDLEEVN 542
++ + DE+R A+ +Q +KA+ R K+ +R L+ +E R+LQR+LE+
Sbjct: 1845 KDVLLQVDDERRNAEQYKDQADKASTRLKQLKRQLEEAEEEAQRANASRRKLQRELEDAT 1904
Query: 543 ETKEARDQEIKVLKTKVER 599
ET +A ++E+ LK K+ R
Sbjct: 1905 ETADAMNREVSSLKNKLRR 1923
Score = 33.1 bits (74), Expect = 0.73
Identities = 27/128 (21%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Frame = +3
Query: 255 VSAQQIKIQSLDAQLDAKIEEINQAXXXXXXXXXXXXXIMALMVDEQRRADNAIEQIEKA 434
++ Q +I L QL K EE+ A +A + +E + + A+++I +
Sbjct: 1064 IAELQAQIAELKMQLAKKEEELQAA--------------LARVEEEAAQKNMALKKIREL 1109
Query: 435 TGRYKKAERSLQMEQENNSALTTQNRRLQRDLEEVN--------------ETKEARDQEI 572
+ + + L+ E+ + + Q R L +LE + E + R+QE+
Sbjct: 1110 ESQISELQEDLESERASRNKAEKQKRDLGEELEALKTELEDTLDSTAAQQELRSKREQEV 1169
Query: 573 KVLKTKVE 596
+LK +E
Sbjct: 1170 NILKKTLE 1177
>sp|Q62812|MYH9_RAT Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle myosin heavy
chain IIa) (NMMHC II-a) (NMMHC-IIA) (Cellular myosin
heavy chain, type A) (Nonmuscle myosin heavy chain-A)
(NMMHC-A)
Length = 1961
Score = 100 bits (250), Expect = 3e-21
Identities = 57/199 (28%), Positives = 99/199 (49%)
Frame = +3
Query: 3 KRIESNLSALNMDYXXXXXXXXXXXDKNKKVTNQLEQVQNELNVERQNATRLENQKSTAE 182
+R+E+ ++ L + D+ KK Q++Q+ +LN+ER +A + EN + E
Sbjct: 1726 RRLEALIALLEEELEEEQGNTELINDRLKKANLQIDQINTDLNLERSHAQKNENARQQLE 1785
Query: 183 RLNXXXXXXXXXXXXXTGKKYKATVSAQQIKIQSLDAQLDAKIEEINQAXXXXXXXXXXX 362
R N KYKA+++A + KI L+ QLD + +E A
Sbjct: 1786 RQNKELKAKLQEMESAVKSKYKASIAALEAKIAQLEEQLDNETKERQAASKQVRRAEKKL 1845
Query: 363 XXIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQRDLEEVN 542
++ + DE+R A+ +Q +KA+ R K+ +R L+ +E R+LQR+LE+
Sbjct: 1846 KDVLLQVEDERRNAEQFKDQADKASTRLKQLKRQLEEAEEEAQRANASRRKLQRELEDAT 1905
Query: 543 ETKEARDQEIKVLKTKVER 599
ET +A ++E+ LK K+ R
Sbjct: 1906 ETADAMNREVSSLKNKLRR 1924
Score = 30.8 bits (68), Expect = 3.6
Identities = 27/128 (21%), Positives = 53/128 (41%), Gaps = 14/128 (10%)
Frame = +3
Query: 255 VSAQQIKIQSLDAQLDAKIEEINQAXXXXXXXXXXXXXIMALMVDEQRRADNAIEQIEKA 434
++ Q +I L QL K EE+ A +A + +E + + A+++I +
Sbjct: 1064 IAELQAQIAELKMQLAKKEEELQAA--------------LARVEEEAAQKNMALKKIREL 1109
Query: 435 TGRYKKAERSLQMEQENNSALTTQNRRLQRDLEEVN--------------ETKEARDQEI 572
+ + + L+ E+ + Q R L +LE + E + R+QE+
Sbjct: 1110 ETQISELQEDLESERACRNKAEKQKRDLGEELEALKTELEDTLDSTAAQQELRSKREQEV 1169
Query: 573 KVLKTKVE 596
+LK +E
Sbjct: 1170 SILKKTLE 1177
>sp|P35749|MYH11_HUMAN Myosin-11 (Myosin heavy chain, smooth muscle isoform) (SMMHC)
Length = 1972
Score = 99.8 bits (247), Expect = 6e-21
Identities = 56/199 (28%), Positives = 96/199 (48%)
Frame = +3
Query: 3 KRIESNLSALNMDYXXXXXXXXXXXDKNKKVTNQLEQVQNELNVERQNATRLENQKSTAE 182
+R+E+ ++ L + D+ +K T Q EQ+ NEL ER A + E+ + E
Sbjct: 1732 RRLEARIAQLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLE 1791
Query: 183 RLNXXXXXXXXXXXXXTGKKYKATVSAQQIKIQSLDAQLDAKIEEINQAXXXXXXXXXXX 362
R N K+K+T++A + KI L+ Q++ + E A
Sbjct: 1792 RQNKELRSKLHEMEGAVKSKFKSTIAALEAKIAQLEEQVEQEAREKQAATKSLKQKDKKL 1851
Query: 363 XXIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQRDLEEVN 542
I+ + DE++ A+ EQ EK R K+ +R L+ +E + + R+LQR+L+E
Sbjct: 1852 KEILLQVEDERKMAEQYKEQAEKGNARVKQLKRQLEEAEEESQRINANRRKLQRELDEAT 1911
Query: 543 ETKEARDQEIKVLKTKVER 599
E+ EA +E+ LK+K+ R
Sbjct: 1912 ESNEAMGREVNALKSKLRR 1930
Score = 35.4 bits (80), Expect = 0.15
Identities = 40/187 (21%), Positives = 72/187 (38%), Gaps = 14/187 (7%)
Frame = +3
Query: 90 KVTNQLEQVQNELNVERQNATRLENQKSTAERLNXXXXXXXXXXXXXTGKKYKATVSAQQ 269
K+ N+ E + +EL V RL+ ++ + + L + ++ Q
Sbjct: 1027 KLKNKHESMISELEV------RLKKEEKSRQELEKLKRKLEGD-----ASDFHEQIADLQ 1075
Query: 270 IKIQSLDAQLDAKIEEINQAXXXXXXXXXXXXXIMALMVDEQRRADNAIEQIEKATGRYK 449
+I L QL K EE+ A +A + DE + +NA+++I + G
Sbjct: 1076 AQIAELKMQLAKKEEELQAA--------------LARLDDEIAQKNNALKKIRELEGHIS 1121
Query: 450 KAERSLQMEQENNSALTTQNRRLQRDLEEVN--------------ETKEARDQEIKVLKT 587
+ L E+ + Q R L +LE + E + R+QE+ VLK
Sbjct: 1122 DLQEDLDSERAARNKAEKQKRDLGEELEALKTELEDTLDSTATQQELRAKREQEVTVLKK 1181
Query: 588 KVERLER 608
++ R
Sbjct: 1182 ALDEETR 1188
>sp|P14105|MYH9_CHICK Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle myosin heavy
chain IIa) (NMMHC II-a) (NMMHC-IIA) (Cellular myosin
heavy chain, type A) (Nonmuscle myosin heavy chain-A)
(NMMHC-A)
Length = 1959
Score = 99.4 bits (246), Expect = 8e-21
Identities = 60/199 (30%), Positives = 99/199 (49%)
Frame = +3
Query: 3 KRIESNLSALNMDYXXXXXXXXXXXDKNKKVTNQLEQVQNELNVERQNATRLENQKSTAE 182
+R+E+ ++ L + D+ KK Q++Q+ +LN ER NA + EN + E
Sbjct: 1725 RRLEARIAQLEEELEEEQGNTEIINDRLKKANLQIDQMNADLNAERSNAQKNENARQQME 1784
Query: 183 RLNXXXXXXXXXXXXXTGKKYKATVSAQQIKIQSLDAQLDAKIEEINQAXXXXXXXXXXX 362
R N KYKAT++A + KI L+ QLD + +E A
Sbjct: 1785 RQNKELKLKLQEMESAVKSKYKATITALEAKIVQLEEQLDMETKERQAASKQVRRAEKKL 1844
Query: 363 XXIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQRDLEEVN 542
I+ + DE+R A+ +Q +KA R K+ +R L+ E E + R+LQR+L++
Sbjct: 1845 KDILLQVDDERRNAEQFKDQADKANMRLKQLKRQLE-EAEEEAQRANVRRKLQRELDDAT 1903
Query: 543 ETKEARDQEIKVLKTKVER 599
ET +A ++E+ LK+K+ R
Sbjct: 1904 ETADAMNREVSSLKSKLRR 1922
Score = 33.5 bits (75), Expect = 0.56
Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Frame = +3
Query: 255 VSAQQIKIQSLDAQLDAKIEEINQAXXXXXXXXXXXXXIMALMVDEQRRADNAIEQIEKA 434
++ Q +I L QL K EE+ A +A + +E + + A+++I +
Sbjct: 1064 IAELQAQIAELKIQLSKKEEELQAA--------------LARVEEEAAQKNMALKKIREL 1109
Query: 435 TGRYKKAERSLQMEQENNSALTTQNRRLQRDLEEVN--------------ETKEARDQEI 572
+ + + L+ E+ + + Q R L +LE + E + R+QE+
Sbjct: 1110 ESQITELQEDLESERASRNKAEKQKRDLGEELEALKTELEDTLDSTAAQQELRSKREQEV 1169
Query: 573 KVLKTKVE 596
VLK +E
Sbjct: 1170 TVLKKTLE 1177
>sp|P10587|MYH11_CHICK Myosin-11 (Myosin heavy chain, gizzard smooth muscle)
Length = 1979
Score = 98.2 bits (243), Expect = 2e-20
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 6/215 (2%)
Frame = +3
Query: 3 KRIESNLSALNMDYXXXXXXXXXXXDKNKKVTNQLEQVQNELNVERQNATRLENQKSTAE 182
+R+E+ ++ L + D+ +K Q EQ+ NEL ER A + EN + E
Sbjct: 1738 RRLEARIAQLEEELDEEHSNIETMSDRMRKAVQQAEQLNNELATERATAQKNENARQQLE 1797
Query: 183 RLNXXXXXXXXXXXXXTGKKYKATVSAQQIKIQSLDAQLDAKIEEINQAXXXXXXXXXXX 362
R N K+K+T++A + KI SL+ QL+ + E A
Sbjct: 1798 RQNKELRSKLQEMEGAVKSKFKSTIAALEAKIASLEEQLEQEAREKQAAAKTLRQKDKKL 1857
Query: 363 XXIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQRDLEEVN 542
+ + DE+++A+ +Q EK R K+ +R L+ +E + + R+LQR+L+E
Sbjct: 1858 KDALLQVEDERKQAEQYKDQAEKGNLRLKQLKRQLEEAEEESQRINANRRKLQRELDEAT 1917
Query: 543 ETKEARDQEIKVLKTKVERLERRV------RTGGR 629
E+ +A +E+ LK+K+ R V R+GGR
Sbjct: 1918 ESNDALGREVAALKSKLRRGNEPVSFAPPRRSGGR 1952
Score = 29.6 bits (65), Expect = 8.0
Identities = 35/148 (23%), Positives = 57/148 (38%), Gaps = 22/148 (14%)
Frame = +3
Query: 255 VSAQQIKIQSLDAQLDAKIEEINQAXXXXXXXXXXXXXIMALMVDEQRRADNAIEQIEKA 434
++ Q +I L AQL K EE+ A + + + + + E +E
Sbjct: 1077 IAELQAQIAELKAQLAKKEEELQAALARLEDETSQKNNALKKIRELESHISDLQEDLESE 1136
Query: 435 TGRYKKAERS------------LQMEQENNSALTTQNRR---------LQRDLEEVNETK 551
KAE+ ++E ++ T Q R L+R LEE T
Sbjct: 1137 KAARNKAEKQKRDLSEELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRTH 1196
Query: 552 EARDQEIKVLKTK-VERLERRVRTGGRA 632
EA+ QE++ T+ VE L ++ RA
Sbjct: 1197 EAQVQEMRQKHTQAVEELTEQLEQFKRA 1224
>sp|P35748|MYH11_RABIT Myosin-11 (Myosin heavy chain, smooth muscle isoform) (SMMHC)
Length = 1972
Score = 97.4 bits (241), Expect = 3e-20
Identities = 54/199 (27%), Positives = 96/199 (48%)
Frame = +3
Query: 3 KRIESNLSALNMDYXXXXXXXXXXXDKNKKVTNQLEQVQNELNVERQNATRLENQKSTAE 182
+R+E+ ++ L + D+ +K T Q EQ+ NEL ER A + E+ + E
Sbjct: 1732 RRLEARIAQLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLE 1791
Query: 183 RLNXXXXXXXXXXXXXTGKKYKATVSAQQIKIQSLDAQLDAKIEEINQAXXXXXXXXXXX 362
R N K+K+T++A + KI L+ Q++ + E A
Sbjct: 1792 RQNKELKSKLQEMEGAVKSKFKSTIAALEAKIAQLEEQVEQEAREKQAAAKALKQRDKKL 1851
Query: 363 XXIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQRDLEEVN 542
++ + DE++ A+ EQ EK + K+ +R L+ +E + + R+LQR+L+E
Sbjct: 1852 KEMLLQVEDERKMAEQYKEQAEKGNAKVKQLKRQLEEAEEESQRINANRRKLQRELDEAT 1911
Query: 543 ETKEARDQEIKVLKTKVER 599
E+ EA +E+ LK+K+ R
Sbjct: 1912 ESNEAMGREVNALKSKLRR 1930
>sp|O08638|MYH11_MOUSE Myosin-11 (Myosin heavy chain, smooth muscle isoform) (SMMHC)
Length = 1972
Score = 95.1 bits (235), Expect = 2e-19
Identities = 55/199 (27%), Positives = 95/199 (47%)
Frame = +3
Query: 3 KRIESNLSALNMDYXXXXXXXXXXXDKNKKVTNQLEQVQNELNVERQNATRLENQKSTAE 182
+R+E+ ++ L + D+ +K T Q EQ+ NEL ER A + E+ + E
Sbjct: 1732 RRLEARIAQLEEELEEEQGNMEAMSDRVRKATLQAEQLSNELATERSTAQKNESARQQLE 1791
Query: 183 RLNXXXXXXXXXXXXXTGKKYKATVSAQQIKIQSLDAQLDAKIEEINQAXXXXXXXXXXX 362
R N K K+TV+A + KI L+ Q++ + E A
Sbjct: 1792 RQNKELRSKLQEVEGAVKAKLKSTVAALEAKIAQLEEQVEQEAREKQAATKSLKQKDKKL 1851
Query: 363 XXIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQRDLEEVN 542
++ + DE++ A+ EQ EK + K+ +R L+ +E + + R+LQR+L+E
Sbjct: 1852 KEVLLQVEDERKMAEQYKEQAEKGNTKVKQLKRQLEEAEEESQCINANRRKLQRELDEAT 1911
Query: 543 ETKEARDQEIKVLKTKVER 599
E+ EA +E+ LK+K+ R
Sbjct: 1912 ESNEAMGREVNALKSKLRR 1930
Score = 33.1 bits (74), Expect = 0.73
Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 14/128 (10%)
Frame = +3
Query: 267 QIKIQSLDAQLDAKIEEINQAXXXXXXXXXXXXXIMALMVDEQRRADNAIEQIEKATGRY 446
Q +I L QL K EE+ A +A + +E + +NA+++I + G
Sbjct: 1075 QAQIAELKMQLAKKEEELQAA--------------LARLDEEIAQKNNALKKIRELEGHI 1120
Query: 447 KKAERSLQMEQENNSALTTQNRRLQRDLEEVN--------------ETKEARDQEIKVLK 584
+ L E+ + Q R L +LE + E + R+QE+ VLK
Sbjct: 1121 SDLQEDLDSERAARNKAEKQKRDLGEELEALKTELEDTLDSTATQQELRAKREQEVTVLK 1180
Query: 585 TKVERLER 608
++ R
Sbjct: 1181 KALDEETR 1188
>sp|Q61879|MYH10_MOUSE Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy
chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin
heavy chain, type B) (Nonmuscle myosin heavy chain-B)
(NMMHC-B)
Length = 1976
Score = 94.7 bits (234), Expect = 2e-19
Identities = 56/199 (28%), Positives = 93/199 (46%)
Frame = +3
Query: 3 KRIESNLSALNMDYXXXXXXXXXXXDKNKKVTNQLEQVQNELNVERQNATRLENQKSTAE 182
+R+E+ ++ L + D+ +K T Q++ + EL ER A + +N + E
Sbjct: 1732 RRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNTELAAERSAAQKSDNARQQLE 1791
Query: 183 RLNXXXXXXXXXXXXXTGKKYKATVSAQQIKIQSLDAQLDAKIEEINQAXXXXXXXXXXX 362
R N K+KAT+SA + KI L+ QL+ + +E A
Sbjct: 1792 RQNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAANKLVRRTEKKL 1851
Query: 363 XXIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQRDLEEVN 542
I + DE+R AD EQ+EKA R K+ +R L+ +E + R+LQR+L++
Sbjct: 1852 KEIFMQVEDERRHADQYKEQMEKANARMKQLKRQLEEAEEEATRANASRRKLQRELDDAT 1911
Query: 543 ETKEARDQEIKVLKTKVER 599
E E +E+ LK ++ R
Sbjct: 1912 EANEGLSREVSTLKNRLRR 1930
Score = 34.7 bits (78), Expect = 0.25
Identities = 40/194 (20%), Positives = 83/194 (42%), Gaps = 18/194 (9%)
Frame = +3
Query: 78 DKNKKVTNQLEQVQNELNVERQNATRLENQKSTAERLNXXXXXXXXXXXXXTGKKYKATV 257
D KKV + L +++ +E L++ ++ ++RL K + T
Sbjct: 1375 DTKKKVDDDLGTIES---LEEAKKKLLKDVEALSQRLEEKVLAYD---------KLEKTK 1422
Query: 258 SAQQIKIQSLDAQLDAK---IEEINQAXXXXXXXXXXXXXIMALMVDEQRRAD-NAIEQI 425
+ Q ++ L LD + + + + I A +E+ RA+ A E+
Sbjct: 1423 NRLQQELDDLTVDLDHQRQIVSNLEKKQKKFDQLLAEEKGISARYAEERDRAEAEAREKE 1482
Query: 426 EKATGRYKKAERSLQMEQENNSALTTQNRRLQRDLE--------------EVNETKEARD 563
KA + E +L+ ++E QN++L+ D+E E+ ++K A +
Sbjct: 1483 TKALSLARALEEALEAKEE----FERQNKQLRADMEDLMSSKDDVGKNVHELEKSKRALE 1538
Query: 564 QEIKVLKTKVERLE 605
Q+++ ++T++E LE
Sbjct: 1539 QQVEEMRTQLEELE 1552
>sp|Q9JLT0|MYH10_RAT Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy
chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin
heavy chain, type B) (Nonmuscle myosin heavy chain-B)
(NMMHC-B)
Length = 1976
Score = 94.7 bits (234), Expect = 2e-19
Identities = 56/199 (28%), Positives = 93/199 (46%)
Frame = +3
Query: 3 KRIESNLSALNMDYXXXXXXXXXXXDKNKKVTNQLEQVQNELNVERQNATRLENQKSTAE 182
+R+E+ ++ L + D+ +K T Q++ + EL ER A + +N + E
Sbjct: 1732 RRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNTELAAERSAAQKSDNARQQLE 1791
Query: 183 RLNXXXXXXXXXXXXXTGKKYKATVSAQQIKIQSLDAQLDAKIEEINQAXXXXXXXXXXX 362
R N K+KAT+SA + KI L+ QL+ + +E A
Sbjct: 1792 RQNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAANKLVRRTEKKL 1851
Query: 363 XXIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQRDLEEVN 542
I + DE+R AD EQ+EKA R K+ +R L+ +E + R+LQR+L++
Sbjct: 1852 KEIFMQVEDERRHADQYKEQMEKANARMKQLKRQLEEAEEEATRANASRRKLQRELDDAT 1911
Query: 543 ETKEARDQEIKVLKTKVER 599
E E +E+ LK ++ R
Sbjct: 1912 EANEGLSREVSTLKNRLRR 1930
Score = 34.3 bits (77), Expect = 0.33
Identities = 40/194 (20%), Positives = 82/194 (42%), Gaps = 18/194 (9%)
Frame = +3
Query: 78 DKNKKVTNQLEQVQNELNVERQNATRLENQKSTAERLNXXXXXXXXXXXXXTGKKYKATV 257
D KKV + L ++ +E L++ ++ ++RL K + T
Sbjct: 1375 DTKKKVDDDLGTIEG---LEEAKKKLLKDVEALSQRLEEKVLAYD---------KLEKTK 1422
Query: 258 SAQQIKIQSLDAQLDAK---IEEINQAXXXXXXXXXXXXXIMALMVDEQRRAD-NAIEQI 425
+ Q ++ L LD + + + + I A +E+ RA+ A E+
Sbjct: 1423 NRLQQELDDLTVDLDHQRQIVSNLEKKQKKFDQLLAEEKGISARYAEERDRAEAEAREKE 1482
Query: 426 EKATGRYKKAERSLQMEQENNSALTTQNRRLQRDLE--------------EVNETKEARD 563
KA + E +L+ ++E QN++L+ D+E E+ ++K A +
Sbjct: 1483 TKALSLARALEEALEAKEE----FERQNKQLRADMEDLMSSKDDVGKNVHELEKSKRALE 1538
Query: 564 QEIKVLKTKVERLE 605
Q+++ ++T++E LE
Sbjct: 1539 QQVEEMRTQLEELE 1552
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,452,421
Number of Sequences: 369166
Number of extensions: 726969
Number of successful extensions: 3703
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3651
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6073541875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)