Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_L07
(557 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P00949|PGM1_RABIT Phosphoglucomutase-1 (Glucose phosphom... 189 4e-48
sp|P36871|PGM1_HUMAN Phosphoglucomutase-1 (Glucose phosphom... 189 5e-48
sp|P38652|PGM1_RAT Phosphoglucomutase-1 (Glucose phosphomut... 187 2e-47
sp|Q4R5E4|PGM1_MACFA Phosphoglucomutase-1 (Glucose phosphom... 187 2e-47
sp|Q9D0F9|PGM1_MOUSE Phosphoglucomutase-1 (Glucose phosphom... 186 3e-47
sp|Q9VUY9|PGM_DROME Phosphoglucomutase (Glucose phosphomuta... 184 2e-46
sp|Q7KHA1|PGM_DROSI Phosphoglucomutase (Glucose phosphomuta... 184 2e-46
sp|P39671|PGM_AGRTU Phosphoglucomutase (Glucose phosphomuta... 182 4e-46
sp|Q15124|PGM5_HUMAN Phosphoglucomutase-like protein 5 (Pho... 172 4e-43
sp|P37012|PGM2_YEAST Phosphoglucomutase-2 (Glucose phosphom... 168 9e-42
>sp|P00949|PGM1_RABIT Phosphoglucomutase-1 (Glucose phosphomutase 1) (PGM 1)
Length = 562
Score = 189 bits (480), Expect = 4e-48
Identities = 97/183 (53%), Positives = 131/183 (71%)
Frame = +3
Query: 9 LVLGGDGRFYNKEVILNVILPVAAANGISKVIIGQNGILSTPAVSHVIRKYSADGGIVLT 188
LV+GGDGRFY KE I +I+ +AAANGI +++IGQNGILSTPAVS +IRK A GGI+LT
Sbjct: 57 LVVGGDGRFYMKEAI-QLIVRIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILT 115
Query: 189 ASHNPGGINEDFGIKYNVKNGGPAPENITDKIFEQSKLINSFKTTEVFQIDLSKIHETTF 368
ASHNPGG N DFGIK+N+ NGGPAPE ITDKIF+ SK I + ++DL + + F
Sbjct: 116 ASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQF 175
Query: 369 ENKDNGKKFIVSIIDSVSDYLAYMKELFDFQSLKAMITGTDGMGPVKILANALNGVMGVY 548
+ ++ K F V I+DSV Y ++ +FDF +LK +++G + + KI +A++GV+G Y
Sbjct: 176 DLENKFKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRL---KIRIDAMHGVVGPY 232
Query: 549 VTK 557
V K
Sbjct: 233 VKK 235
>sp|P36871|PGM1_HUMAN Phosphoglucomutase-1 (Glucose phosphomutase 1) (PGM 1)
Length = 562
Score = 189 bits (479), Expect = 5e-48
Identities = 97/183 (53%), Positives = 130/183 (71%)
Frame = +3
Query: 9 LVLGGDGRFYNKEVILNVILPVAAANGISKVIIGQNGILSTPAVSHVIRKYSADGGIVLT 188
LV+GGDGRFY KE I +I +AAANGI +++IGQNGILSTPAVS +IRK A GGI+LT
Sbjct: 57 LVVGGDGRFYMKEAI-QLIARIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILT 115
Query: 189 ASHNPGGINEDFGIKYNVKNGGPAPENITDKIFEQSKLINSFKTTEVFQIDLSKIHETTF 368
ASHNPGG N DFGIK+N+ NGGPAPE ITDKIF+ SK I + ++DL + + F
Sbjct: 116 ASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAVCPDLKVDLGVLGKQQF 175
Query: 369 ENKDNGKKFIVSIIDSVSDYLAYMKELFDFQSLKAMITGTDGMGPVKILANALNGVMGVY 548
+ ++ K F V I+DSV Y ++ +FDF +LK +++G + + KI +A++GV+G Y
Sbjct: 176 DLENKFKPFTVEIVDSVEAYATMLRSIFDFSALKELLSGPNRL---KIRIDAMHGVVGPY 232
Query: 549 VTK 557
V K
Sbjct: 233 VKK 235
>sp|P38652|PGM1_RAT Phosphoglucomutase-1 (Glucose phosphomutase 1) (PGM 1)
Length = 562
Score = 187 bits (474), Expect = 2e-47
Identities = 96/183 (52%), Positives = 130/183 (71%)
Frame = +3
Query: 9 LVLGGDGRFYNKEVILNVILPVAAANGISKVIIGQNGILSTPAVSHVIRKYSADGGIVLT 188
LV+GGDGRFY E I +I+ +AAANGI +++IGQNGILSTPAVS +IRK A GGI+LT
Sbjct: 57 LVVGGDGRFYMTEAI-QLIVRIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILT 115
Query: 189 ASHNPGGINEDFGIKYNVKNGGPAPENITDKIFEQSKLINSFKTTEVFQIDLSKIHETTF 368
ASHNPGG N DFGIK+N+ NGGPAPE ITDKIF+ SK I + ++DL + + F
Sbjct: 116 ASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQF 175
Query: 369 ENKDNGKKFIVSIIDSVSDYLAYMKELFDFQSLKAMITGTDGMGPVKILANALNGVMGVY 548
+ ++ K F V I+DSV Y ++ +FDF +LK +++G + + KI +A++GV+G Y
Sbjct: 176 DLENKFKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRL---KIRIDAMHGVVGPY 232
Query: 549 VTK 557
V K
Sbjct: 233 VKK 235
>sp|Q4R5E4|PGM1_MACFA Phosphoglucomutase-1 (Glucose phosphomutase 1) (PGM 1)
Length = 562
Score = 187 bits (474), Expect = 2e-47
Identities = 96/183 (52%), Positives = 130/183 (71%)
Frame = +3
Query: 9 LVLGGDGRFYNKEVILNVILPVAAANGISKVIIGQNGILSTPAVSHVIRKYSADGGIVLT 188
LV+GGDGRFY KE I +I +AAANGI +++IGQNGILSTPAVS +IRK A GGI+LT
Sbjct: 57 LVVGGDGRFYMKEAI-QLIARIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILT 115
Query: 189 ASHNPGGINEDFGIKYNVKNGGPAPENITDKIFEQSKLINSFKTTEVFQIDLSKIHETTF 368
ASHNPGG N DFGIK+N+ NGGPAPE ITDKIF+ SK I + ++DL + + F
Sbjct: 116 ASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQF 175
Query: 369 ENKDNGKKFIVSIIDSVSDYLAYMKELFDFQSLKAMITGTDGMGPVKILANALNGVMGVY 548
+ ++ + F V I+DSV Y ++ +FDF +LK +++G + + KI +A++GV+G Y
Sbjct: 176 DLENKFEPFTVEIVDSVEAYATMLRNIFDFSALKELLSGPNRL---KIRIDAMHGVVGPY 232
Query: 549 VTK 557
V K
Sbjct: 233 VKK 235
>sp|Q9D0F9|PGM1_MOUSE Phosphoglucomutase-1 (Glucose phosphomutase 1) (PGM 1)
Length = 562
Score = 186 bits (473), Expect = 3e-47
Identities = 96/183 (52%), Positives = 130/183 (71%)
Frame = +3
Query: 9 LVLGGDGRFYNKEVILNVILPVAAANGISKVIIGQNGILSTPAVSHVIRKYSADGGIVLT 188
LV+GGDGRFY E I +I+ +AAANGI +++IGQNGILSTPAVS +IRK A GGI+LT
Sbjct: 57 LVVGGDGRFYMTEAI-QLIVRIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILT 115
Query: 189 ASHNPGGINEDFGIKYNVKNGGPAPENITDKIFEQSKLINSFKTTEVFQIDLSKIHETTF 368
ASHNPGG N DFGIK+N+ NGGPAPE ITDKIF+ SK I + ++DL + + F
Sbjct: 116 ASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLRVLGKQQF 175
Query: 369 ENKDNGKKFIVSIIDSVSDYLAYMKELFDFQSLKAMITGTDGMGPVKILANALNGVMGVY 548
+ ++ K F V I+DSV Y ++ +FDF +LK +++G + + KI +A++GV+G Y
Sbjct: 176 DLENKFKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRL---KIRIDAMHGVVGPY 232
Query: 549 VTK 557
V K
Sbjct: 233 VKK 235
>sp|Q9VUY9|PGM_DROME Phosphoglucomutase (Glucose phosphomutase) (PGM)
Length = 560
Score = 184 bits (466), Expect = 2e-46
Identities = 95/181 (52%), Positives = 130/181 (71%)
Frame = +3
Query: 9 LVLGGDGRFYNKEVILNVILPVAAANGISKVIIGQNGILSTPAVSHVIRKYSADGGIVLT 188
LV+GGDGRFY KE +I+ ++AANG+SK+++GQNGILSTPAVS +IR A GGIVLT
Sbjct: 56 LVVGGDGRFYCKEAA-ELIVRLSAANGVSKLLVGQNGILSTPAVSSLIRHNKALGGIVLT 114
Query: 189 ASHNPGGINEDFGIKYNVKNGGPAPENITDKIFEQSKLINSFKTTEVFQIDLSKIHETTF 368
ASHNPGG DFGIK+N +NGGPAP+ T+ I++ + I +K QID+SK+ T+F
Sbjct: 115 ASHNPGGPENDFGIKFNCENGGPAPDAFTNHIYKITTEIKEYKLVRNLQIDISKVGVTSF 174
Query: 369 ENKDNGKKFIVSIIDSVSDYLAYMKELFDFQSLKAMITGTDGMGPVKILANALNGVMGVY 548
+ GK F V +IDSV++Y+ +M+E+FDF LK ++G P+K+ +A+NGV G Y
Sbjct: 175 DIA--GKPFTVEVIDSVANYVRHMEEIFDFAKLKDFVSGKATGKPLKMRIDAMNGVTGSY 232
Query: 549 V 551
V
Sbjct: 233 V 233
>sp|Q7KHA1|PGM_DROSI Phosphoglucomutase (Glucose phosphomutase) (PGM)
Length = 560
Score = 184 bits (466), Expect = 2e-46
Identities = 95/181 (52%), Positives = 130/181 (71%)
Frame = +3
Query: 9 LVLGGDGRFYNKEVILNVILPVAAANGISKVIIGQNGILSTPAVSHVIRKYSADGGIVLT 188
LV+GGDGRFY KE +I+ ++AANG+SK+++GQNGILSTPAVS +IR A GGIVLT
Sbjct: 56 LVVGGDGRFYCKEAA-ELIVRLSAANGVSKLLVGQNGILSTPAVSSLIRHNKALGGIVLT 114
Query: 189 ASHNPGGINEDFGIKYNVKNGGPAPENITDKIFEQSKLINSFKTTEVFQIDLSKIHETTF 368
ASHNPGG DFGIK+N +NGGPAP+ T+ I++ + I +K QID+SK+ T+F
Sbjct: 115 ASHNPGGPENDFGIKFNCENGGPAPDAFTNHIYKITTEIKEYKLVRNLQIDISKVGVTSF 174
Query: 369 ENKDNGKKFIVSIIDSVSDYLAYMKELFDFQSLKAMITGTDGMGPVKILANALNGVMGVY 548
+ GK F V +IDSV++Y+ +M+E+FDF LK ++G P+K+ +A+NGV G Y
Sbjct: 175 DIA--GKPFTVEVIDSVANYVRHMEEIFDFAKLKDFVSGKATGKPLKMRIDAMNGVTGSY 232
Query: 549 V 551
V
Sbjct: 233 V 233
>sp|P39671|PGM_AGRTU Phosphoglucomutase (Glucose phosphomutase) (PGM)
Length = 542
Score = 182 bits (463), Expect = 4e-46
Identities = 95/185 (51%), Positives = 129/185 (69%)
Frame = +3
Query: 3 EALVLGGDGRFYNKEVILNVILPVAAANGISKVIIGQNGILSTPAVSHVIRKYSADGGIV 182
+ LV+GGDGR+YN+EVI I +AAA G KV++GQ GILSTPA S+VIRKY A GGIV
Sbjct: 50 QTLVIGGDGRYYNREVIQKAI-KMAAAAGFGKVLVGQGGILSTPAASNVIRKYKAFGGIV 108
Query: 183 LTASHNPGGINEDFGIKYNVKNGGPAPENITDKIFEQSKLINSFKTTEVFQIDLSKIHET 362
L+ASHNPGG EDFGIKYN+ NGGPAPE ITD I+ +SK+I+S+K ++ IDL KI
Sbjct: 109 LSASHNPGGPTEDFGIKYNIGNGGPAPEKITDAIYARSKVIDSYKISDAADIDLDKIGSF 168
Query: 363 TFENKDNGKKFIVSIIDSVSDYLAYMKELFDFQSLKAMITGTDGMGPVKILANALNGVMG 542
+ + V +ID V+DY A M+ELFDF +++++I G K++ ++++ V G
Sbjct: 169 KVD------ELTVDVIDPVADYAALMEELFDFGAIRSLIA-----GGFKVVVDSMSAVTG 217
Query: 543 VYVTK 557
Y +
Sbjct: 218 PYAVE 222
>sp|Q15124|PGM5_HUMAN Phosphoglucomutase-like protein 5 (Phosphoglucomutase-related
protein) (PGM-RP) (Aciculin)
Length = 506
Score = 172 bits (437), Expect = 4e-43
Identities = 87/183 (47%), Positives = 128/183 (69%)
Frame = +3
Query: 9 LVLGGDGRFYNKEVILNVILPVAAANGISKVIIGQNGILSTPAVSHVIRKYSADGGIVLT 188
+V+G DGR++++ I +++ +AAANGI ++IIGQNGILSTPAVS +IRK A GGI+LT
Sbjct: 1 MVVGSDGRYFSRTAI-EIVVQMAAANGIGRLIIGQNGILSTPAVSCIIRKIKAAGGIILT 59
Query: 189 ASHNPGGINEDFGIKYNVKNGGPAPENITDKIFEQSKLINSFKTTEVFQIDLSKIHETTF 368
ASH PGG +FG+K+NV NGGPAP+ ++DKI++ SK I + +IDLS++ F
Sbjct: 60 ASHCPGGPGGEFGVKFNVANGGPAPDVVSDKIYQISKTIEEYAICPDLRIDLSRLGRQEF 119
Query: 369 ENKDNGKKFIVSIIDSVSDYLAYMKELFDFQSLKAMITGTDGMGPVKILANALNGVMGVY 548
+ ++ K F V I+D V YL ++ +FDF ++K ++TG +KI +A++GVMG Y
Sbjct: 120 DLENKFKPFRVEIVDPVDIYLNLLRTIFDFHAIKGLLTGP---SQLKIRIDAMHGVMGPY 176
Query: 549 VTK 557
V K
Sbjct: 177 VRK 179
>sp|P37012|PGM2_YEAST Phosphoglucomutase-2 (Glucose phosphomutase 2) (PGM 2)
Length = 569
Score = 168 bits (425), Expect = 9e-42
Identities = 91/183 (49%), Positives = 124/183 (67%), Gaps = 3/183 (1%)
Frame = +3
Query: 9 LVLGGDGRFYNKEVILNVILPVAAANGISKVIIGQNGILSTPAVSHVIRKY--SADGGIV 182
LV+GGDGR+YN +VIL+ I + AANGI K++IGQ+G+LSTPA SH++R Y GGI+
Sbjct: 57 LVVGGDGRYYN-DVILHKIAAIGAANGIKKLVIGQHGLLSTPAASHIMRTYEEKCTGGII 115
Query: 183 LTASHNPGGINEDFGIKYNVKNGGPAPENITDKIFEQSKLINSFKTTEVF-QIDLSKIHE 359
LTASHNPGG D GIKYN+ NGGPAPE++T+ I+E SK + S+K + F ++DL
Sbjct: 116 LTASHNPGGPENDMGIKYNLSNGGPAPESVTNAIWEISKKLTSYKIIKDFPELDLG---- 171
Query: 360 TTFENKDNGKKFIVSIIDSVSDYLAYMKELFDFQSLKAMITGTDGMGPVKILANALNGVM 539
T +NK G +V IID DY+ ++KE+FDF +K I K+L +++NGV
Sbjct: 172 TIGKNKKYG-PLLVDIIDITKDYVNFLKEIFDFDLIKKFIDNQRSTKNWKLLFDSMNGVT 230
Query: 540 GVY 548
G Y
Sbjct: 231 GPY 233
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,743,301
Number of Sequences: 369166
Number of extensions: 1255724
Number of successful extensions: 4104
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4031
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 3980545740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)