Dr_sW_027_K11-1
- ACCESSION : BW643535
- GO Category :
Not Available
- EST Sequence :
BLASTX 2.2.12 [Aug-07-2005]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_K11-1
(298 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q89AD2|DSBA_BUCBP Thiol:disulfide interchange protein ds... 28 8.4
>sp|Q89AD2|DSBA_BUCBP Thiol:disulfide interchange protein dsbA precursor
Length = 211
Score = 27.7 bits (60), Expect = 8.4
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -1
Query: 268 INQNERIVRYLNTQQLTESYY*GNLKYIFNDSIIIISTCTNRLTKY 131
I + ERI +++ ++ + G KYI ND II + TN + KY
Sbjct: 156 IYKQERIEKFIKLDRVPATIIKG--KYIINDMIIQKKSITNFINKY 199
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,484,543
Number of Sequences: 369166
Number of extensions: 439796
Number of successful extensions: 835
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 68,354,980
effective HSP length: 68
effective length of database: 55,793,000
effective search space used: 1673790000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)