Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_I02
(814 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P05091|ALDH2_HUMAN Aldehyde dehydrogenase, mitochondrial... 383 e-106
sp|P11884|ALDH2_RAT Aldehyde dehydrogenase, mitochondrial p... 380 e-105
sp|P81178|ALDH2_MESAU Aldehyde dehydrogenase, mitochondrial... 380 e-105
sp|P47738|ALDH2_MOUSE Aldehyde dehydrogenase, mitochondrial... 378 e-104
sp|P20000|ALDH2_BOVIN Aldehyde dehydrogenase, mitochondrial... 374 e-103
sp|P12762|ALDH2_HORSE Aldehyde dehydrogenase, mitochondrial... 372 e-103
sp|O93344|AL1A2_CHICK Retinal dehydrogenase 2 (RalDH2) (RAL... 368 e-102
sp|Q63639|AL1A2_RAT Retinal dehydrogenase 2 (RalDH2) (RALDH... 367 e-101
sp|Q62148|AL1A2_MOUSE Retinal dehydrogenase 2 (RalDH2) (RAL... 366 e-101
sp|O94788|AL1A2_HUMAN Retinal dehydrogenase 2 (RalDH2) (RAL... 366 e-101
>sp|P05091|ALDH2_HUMAN Aldehyde dehydrogenase, mitochondrial precursor (ALDH class 2)
(ALDHI) (ALDH-E2)
Length = 517
Score = 383 bits (983), Expect = e-106
Identities = 178/270 (65%), Positives = 221/270 (81%), Gaps = 1/270 (0%)
Frame = +3
Query: 3 YVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGRIISSECNKNNI 182
YVA+LI EAGFPPGVVNIVPG GP AGAA+ SH +VDK+AFTGSTE+GR+I +N+
Sbjct: 220 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNL 279
Query: 183 KRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVEEKIYDKFVEAM 362
KR+TLELGGKSPNI+++DAD D AV+ +HFALFFN GQCCCAGSR +V+E IYD+FVE
Sbjct: 280 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERS 339
Query: 363 VAEAKTKIVGNPFDD-VDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGGKQLGDKGYFVE 539
VA AK+++VGNPFD +QGPQVD+ Q KI+ IN+GK EGA+L GG D+GYF++
Sbjct: 340 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQ 399
Query: 540 PTIFSKVNDNMRIAKEEIFGPVMQIMKFKNIDEVIERANNNEYGLAASVFTKDIEKSMHI 719
PT+F V D M IAKEEIFGPVMQI+KFK I+EV+ RANN+ YGLAA+VFTKD++K+ ++
Sbjct: 400 PTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYL 459
Query: 720 MQSLRAGTVWINCYDAFDAAAPFGGYKASG 809
Q+L+AGTVW+NCYD F A +PFGGYK SG
Sbjct: 460 SQALQAGTVWVNCYDVFGAQSPFGGYKMSG 489
>sp|P11884|ALDH2_RAT Aldehyde dehydrogenase, mitochondrial precursor (ALDH class 2)
(ALDH1) (ALDH-E2)
Length = 519
Score = 380 bits (975), Expect = e-105
Identities = 177/270 (65%), Positives = 220/270 (81%), Gaps = 1/270 (0%)
Frame = +3
Query: 3 YVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGRIISSECNKNNI 182
YVA+LI EAGFPPGVVNIVPG GP AGAA+ SH +VDK+AFTGSTEVG +I +N+
Sbjct: 222 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSSNL 281
Query: 183 KRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVEEKIYDKFVEAM 362
KR+TLELGGKSPNI+++DAD D AV+ +HFALFFN GQCCCAGSR +V+E +YD+FVE
Sbjct: 282 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVERS 341
Query: 363 VAEAKTKIVGNPFDD-VDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGGKQLGDKGYFVE 539
VA AK+++VGNPFD +QGPQVD+ Q KI+ I SG+ EGA+L GG D+GYF++
Sbjct: 342 VARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYFIQ 401
Query: 540 PTIFSKVNDNMRIAKEEIFGPVMQIMKFKNIDEVIERANNNEYGLAASVFTKDIEKSMHI 719
PT+F V D M IAKEEIFGPVMQI+KFK I+EV+ RANN++YGLAA+VFTKD++K+ ++
Sbjct: 402 PTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKANYL 461
Query: 720 MQSLRAGTVWINCYDAFDAAAPFGGYKASG 809
Q+L+AGTVWINCYD F A +PFGGYK SG
Sbjct: 462 SQALQAGTVWINCYDVFGAQSPFGGYKMSG 491
>sp|P81178|ALDH2_MESAU Aldehyde dehydrogenase, mitochondrial (ALDH class 2) (ALDH1)
(ALDH-E2)
Length = 500
Score = 380 bits (975), Expect = e-105
Identities = 177/270 (65%), Positives = 220/270 (81%), Gaps = 1/270 (0%)
Frame = +3
Query: 3 YVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGRIISSECNKNNI 182
YVA+LI EAGFPPGVVNIVPG GP AGAA+ SH +VDK+AFTGSTEVG +I +N+
Sbjct: 203 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSSNL 262
Query: 183 KRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVEEKIYDKFVEAM 362
KR+TLELGGKSPNI+++DAD D AV+ +HFALFFN GQCCCAGSR +V+E +YD+FVE
Sbjct: 263 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVERS 322
Query: 363 VAEAKTKIVGNPFDD-VDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGGKQLGDKGYFVE 539
VA AK+++VGNPFD +QGPQVD+ Q KI+ I SG+ EGA+L GG D+GYF++
Sbjct: 323 VARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYFIQ 382
Query: 540 PTIFSKVNDNMRIAKEEIFGPVMQIMKFKNIDEVIERANNNEYGLAASVFTKDIEKSMHI 719
PT+F V D M IAKEEIFGPVMQI+KFK I+EV+ RANN++YGLAA+VFTKD++K+ ++
Sbjct: 383 PTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKANYL 442
Query: 720 MQSLRAGTVWINCYDAFDAAAPFGGYKASG 809
Q+L+AGTVWINCYD F A +PFGGYK SG
Sbjct: 443 SQALQAGTVWINCYDVFGAQSPFGGYKMSG 472
>sp|P47738|ALDH2_MOUSE Aldehyde dehydrogenase, mitochondrial precursor (ALDH class 2)
(AHD-M1) (ALDHI) (ALDH-E2)
Length = 519
Score = 378 bits (970), Expect = e-104
Identities = 176/270 (65%), Positives = 219/270 (81%), Gaps = 1/270 (0%)
Frame = +3
Query: 3 YVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGRIISSECNKNNI 182
YVA+LI EAGFPPGVVNIVPG GP AGAA+ SH VDK+AFTGSTEVG +I +N+
Sbjct: 222 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEGVDKVAFTGSTEVGHLIQVAAGSSNL 281
Query: 183 KRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVEEKIYDKFVEAM 362
KR+TLELGGKSPNI+++DAD D AV+ +HFALFFN GQCCCAGSR +V+E +YD+FVE
Sbjct: 282 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQENVYDEFVERS 341
Query: 363 VAEAKTKIVGNPFDD-VDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGGKQLGDKGYFVE 539
VA AK+++VGNPFD +QGPQVD+ Q KI+ I SG+ EGA+L GG D+GYF++
Sbjct: 342 VARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYFIQ 401
Query: 540 PTIFSKVNDNMRIAKEEIFGPVMQIMKFKNIDEVIERANNNEYGLAASVFTKDIEKSMHI 719
PT+F V D M IAKEEIFGPVMQI+KFK I+EV+ RAN+++YGLAA+VFTKD++K+ ++
Sbjct: 402 PTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANDSKYGLAAAVFTKDLDKANYL 461
Query: 720 MQSLRAGTVWINCYDAFDAAAPFGGYKASG 809
Q+L+AGTVWINCYD F A +PFGGYK SG
Sbjct: 462 SQALQAGTVWINCYDVFGAQSPFGGYKMSG 491
>sp|P20000|ALDH2_BOVIN Aldehyde dehydrogenase, mitochondrial precursor (ALDH class 2)
(ALDHI) (ALDH-E2)
Length = 520
Score = 374 bits (961), Expect = e-103
Identities = 171/270 (63%), Positives = 220/270 (81%), Gaps = 1/270 (0%)
Frame = +3
Query: 3 YVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGRIISSECNKNNI 182
YVA+LI EAGFPPGVVN++PG GP AGAA+ SH +VDK+AFTGSTEVG +I K+N+
Sbjct: 223 YVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNL 282
Query: 183 KRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVEEKIYDKFVEAM 362
KR+TLE+GGKSPNI+++DAD D AV+ +HFALFFN GQCCCAGSR +V+E IY +FVE
Sbjct: 283 KRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERS 342
Query: 363 VAEAKTKIVGNPFDD-VDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGGKQLGDKGYFVE 539
VA AK+++VGNPFD +QGPQVD+ Q K++ I SGK EG +L GG D+GYF++
Sbjct: 343 VARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGGAAADRGYFIQ 402
Query: 540 PTIFSKVNDNMRIAKEEIFGPVMQIMKFKNIDEVIERANNNEYGLAASVFTKDIEKSMHI 719
PT+F + D M IAKEEIFGPVMQI+KFK+++EV+ RANN++YGLAA+VFTKD++K+ ++
Sbjct: 403 PTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDLDKANYL 462
Query: 720 MQSLRAGTVWINCYDAFDAAAPFGGYKASG 809
Q+L+AGTVW+NCYD F A +PFGGYK SG
Sbjct: 463 SQALQAGTVWVNCYDVFGAQSPFGGYKLSG 492
>sp|P12762|ALDH2_HORSE Aldehyde dehydrogenase, mitochondrial (ALDH class 2) (ALDHI)
(ALDH-E2)
Length = 500
Score = 372 bits (956), Expect = e-103
Identities = 173/270 (64%), Positives = 219/270 (81%), Gaps = 1/270 (0%)
Frame = +3
Query: 3 YVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGRIISSECNKNNI 182
YVA+L EAGFPPGVVN+VPG GP AGAA+ SH +VDK+AFTGSTEVG +I ++N+
Sbjct: 203 YVANLTKEAGFPPGVVNVVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGRSNL 262
Query: 183 KRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVEEKIYDKFVEAM 362
K++TLELGGKSPNI+++DAD D AV+ +HFALFFN GQCC AGSR +V+E +Y +FVE
Sbjct: 263 KKVTLELGGKSPNIIVSDADMDWAVEQAHFALFFNQGQCCGAGSRTFVQEDVYAEFVERS 322
Query: 363 VAEAKTKIVGNPFD-DVDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGGKQLGDKGYFVE 539
VA AK+++VGNPFD +QGPQVD+ Q NK++ I SGK EGA+L GG D+GYF++
Sbjct: 323 VARAKSRVVGNPFDSQTEQGPQVDETQFNKVLGYIKSGKEEGAKLLCGGGAAADRGYFIQ 382
Query: 540 PTIFSKVNDNMRIAKEEIFGPVMQIMKFKNIDEVIERANNNEYGLAASVFTKDIEKSMHI 719
PT+F V D M IAKEEIFGPVMQI+KFK I+EV+ RANN++YGLAA+VFTKD++K+ ++
Sbjct: 383 PTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKANYL 442
Query: 720 MQSLRAGTVWINCYDAFDAAAPFGGYKASG 809
Q+L+AGTVWINCYD F A +PFGGYK SG
Sbjct: 443 SQALQAGTVWINCYDVFGAQSPFGGYKMSG 472
>sp|O93344|AL1A2_CHICK Retinal dehydrogenase 2 (RalDH2) (RALDH 2) (RALDH(II))
(Retinaldehyde-specific dehydrogenase type 2) (Aldehyde
dehydrogenase family 1 member A2)
Length = 499
Score = 368 bits (945), Expect = e-102
Identities = 170/270 (62%), Positives = 220/270 (81%), Gaps = 1/270 (0%)
Frame = +3
Query: 3 YVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGRIISSECNKNNI 182
Y+ +LI EAGFPPGVVNI+PG GP+ GAA+ SH +DKIAFTGSTEVG++I ++N+
Sbjct: 202 YMGALIKEAGFPPGVVNILPGFGPIVGAAIASHVGIDKIAFTGSTEVGKLIQEAAGRSNL 261
Query: 183 KRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVEEKIYDKFVEAM 362
KR+TLELGGKSPNI+ ADAD D+AV+ +H +FFN GQCC AGSRIYVEE IY++FV
Sbjct: 262 KRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIYVEESIYEEFVRRS 321
Query: 363 VAEAKTKIVGNPFD-DVDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGGKQLGDKGYFVE 539
V AK ++VG+PFD +QGPQ+DK Q NKI++LI SG +EGA+L GGK LG KG+F+E
Sbjct: 322 VERAKRRVVGSPFDPTTEQGPQIDKKQYNKILELIQSGITEGAKLECGGKGLGRKGFFIE 381
Query: 540 PTIFSKVNDNMRIAKEEIFGPVMQIMKFKNIDEVIERANNNEYGLAASVFTKDIEKSMHI 719
PT+FS V D+MRIAKEEIFGPV +I++FK +DEVIERANN+++GL A+VFT DI K++ +
Sbjct: 382 PTVFSNVTDDMRIAKEEIFGPVQEILRFKTVDEVIERANNSDFGLVAAVFTNDINKALTV 441
Query: 720 MQSLRAGTVWINCYDAFDAAAPFGGYKASG 809
+++AGTVWINCY+A +A +PFGG+K SG
Sbjct: 442 SSAMQAGTVWINCYNALNAQSPFGGFKMSG 471
>sp|Q63639|AL1A2_RAT Retinal dehydrogenase 2 (RalDH2) (RALDH 2) (RALDH(II))
(Retinaldehyde-specific dehydrogenase type 2) (Aldehyde
dehydrogenase family 1 member A2)
Length = 499
Score = 367 bits (941), Expect = e-101
Identities = 171/270 (63%), Positives = 221/270 (81%), Gaps = 1/270 (0%)
Frame = +3
Query: 3 YVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGRIISSECNKNNI 182
Y+ +LI EAGFPPGVVNI+PG GP AGAA+ SH +DKIAFTGSTEVG++I ++N+
Sbjct: 202 YMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNL 261
Query: 183 KRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVEEKIYDKFVEAM 362
KR+TLELGGKSPNI+ ADAD D+AV+ +H +FFN GQCC AGSRI+VEE IY++FV+
Sbjct: 262 KRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVKRS 321
Query: 363 VAEAKTKIVGNPFD-DVDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGGKQLGDKGYFVE 539
V AK +IVG+PFD +QGPQ+DK Q NKI++LI SG +EGA+L GGK LG KG+F+E
Sbjct: 322 VERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIE 381
Query: 540 PTIFSKVNDNMRIAKEEIFGPVMQIMKFKNIDEVIERANNNEYGLAASVFTKDIEKSMHI 719
PT+FS V D+MRIAKEEIFGPV +I++FK +DEVIERANN+++GL A+VFT DI K++ +
Sbjct: 382 PTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMV 441
Query: 720 MQSLRAGTVWINCYDAFDAAAPFGGYKASG 809
+++AGTVWINCY+A +A +PFGG+K SG
Sbjct: 442 SSAMQAGTVWINCYNALNAQSPFGGFKMSG 471
>sp|Q62148|AL1A2_MOUSE Retinal dehydrogenase 2 (RalDH2) (RALDH 2) (RALDH(II))
(Retinaldehyde-specific dehydrogenase type 2) (Aldehyde
dehydrogenase family 1 member A2)
Length = 499
Score = 366 bits (940), Expect = e-101
Identities = 170/270 (62%), Positives = 221/270 (81%), Gaps = 1/270 (0%)
Frame = +3
Query: 3 YVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGRIISSECNKNNI 182
Y+ +LI EAGFPPGVVNI+PG GP AGAA+ SH +DKIAFTGSTEVG++I ++N+
Sbjct: 202 YMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNL 261
Query: 183 KRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVEEKIYDKFVEAM 362
KR+TLELGGKSPNI+ ADAD D+AV+ +H +FFN GQCC AGSRI+VEE IY++FV+
Sbjct: 262 KRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVKRS 321
Query: 363 VAEAKTKIVGNPFD-DVDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGGKQLGDKGYFVE 539
V AK +IVG+PFD +QGPQ+DK Q NK+++LI SG +EGA+L GGK LG KG+F+E
Sbjct: 322 VERAKRRIVGSPFDPTTEQGPQIDKKQYNKVLELIQSGVAEGAKLECGGKGLGRKGFFIE 381
Query: 540 PTIFSKVNDNMRIAKEEIFGPVMQIMKFKNIDEVIERANNNEYGLAASVFTKDIEKSMHI 719
PT+FS V D+MRIAKEEIFGPV +I++FK +DEVIERANN+++GL A+VFT DI K++ +
Sbjct: 382 PTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMV 441
Query: 720 MQSLRAGTVWINCYDAFDAAAPFGGYKASG 809
+++AGTVWINCY+A +A +PFGG+K SG
Sbjct: 442 SSAMQAGTVWINCYNALNAQSPFGGFKMSG 471
>sp|O94788|AL1A2_HUMAN Retinal dehydrogenase 2 (RalDH2) (RALDH 2) (RALDH(II))
(Retinaldehyde-specific dehydrogenase type 2) (Aldehyde
dehydrogenase family 1 member A2)
Length = 499
Score = 366 bits (939), Expect = e-101
Identities = 170/270 (62%), Positives = 220/270 (81%), Gaps = 1/270 (0%)
Frame = +3
Query: 3 YVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGRIISSECNKNNI 182
Y+ +LI EAGFPPGV+NI+PG GP AGAA+ SH +DKIAFTGSTEVG++I ++N+
Sbjct: 202 YMGALIKEAGFPPGVINILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNL 261
Query: 183 KRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVEEKIYDKFVEAM 362
KR+TLELGGKSPNI+ ADAD D+AV+ +H +FFN GQCC AGSRI+VEE IY++FV
Sbjct: 262 KRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVRRS 321
Query: 363 VAEAKTKIVGNPFD-DVDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGGKQLGDKGYFVE 539
V AK +IVG+PFD +QGPQ+DK Q NKI++LI SG +EGA+L GGK LG KG+F+E
Sbjct: 322 VERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIE 381
Query: 540 PTIFSKVNDNMRIAKEEIFGPVMQIMKFKNIDEVIERANNNEYGLAASVFTKDIEKSMHI 719
PT+FS V D+MRIAKEEIFGPV +I++FK +DEVIERANN+++GL A+VFT DI K++ +
Sbjct: 382 PTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTV 441
Query: 720 MQSLRAGTVWINCYDAFDAAAPFGGYKASG 809
+++AGTVWINCY+A +A +PFGG+K SG
Sbjct: 442 SSAMQAGTVWINCYNALNAQSPFGGFKMSG 471
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,960,478
Number of Sequences: 369166
Number of extensions: 1758236
Number of successful extensions: 6009
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5599
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7763237265
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)