Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_H20
(668 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P51121|GLNA_XENLA Glutamine synthetase (Glutamate--ammon... 310 2e-84
sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammon... 306 3e-83
sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammon... 305 5e-83
sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammon... 305 9e-83
sp|Q4R7U3|GLNA_MACFA Glutamine synthetase (Glutamate--ammon... 305 9e-83
sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammon... 304 2e-82
sp|P46410|GLNA_PIG Glutamine synthetase (Glutamate--ammonia... 302 6e-82
sp|P15105|GLNA_MOUSE Glutamine synthetase (Glutamate--ammon... 301 1e-81
sp|P20478|GLNA2_DROME Glutamine synthetase 2, cytoplasmic (... 300 2e-81
sp|P09606|GLNA_RAT Glutamine synthetase (Glutamate--ammonia... 298 9e-81
>sp|P51121|GLNA_XENLA Glutamine synthetase (Glutamate--ammonia ligase)
Length = 392
Score = 310 bits (794), Expect = 2e-84
Identities = 137/191 (71%), Positives = 167/191 (87%)
Frame = +2
Query: 2 RDIIEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDF 181
RD++E+HYKACL+AGIKI GTNAEVMP+QWEFQ+GPCEGI++ DHLWMAR++LHRV EDF
Sbjct: 173 RDVVESHYKACLYAGIKICGTNAEVMPSQWEFQVGPCEGIDMGDHLWMARFILHRVCEDF 232
Query: 182 GVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHK 361
GVV + DPKP+ G+WNGAG HTNYST MR GG+K+IE+AIEK+ KRH HI YDP
Sbjct: 233 GVVATLDPKPMTGNWNGAGCHTNYSTESMRVEGGLKHIEDAIEKLGKRHDYHICVYDPRG 292
Query: 362 GEDNRRRLTGRHETSTIDDFSSGVANRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVT 541
G+DN RRLTG+HETS+I +FS+GVANRGASIRIPRQV ++G+GY EDRRP++NCDPY+VT
Sbjct: 293 GKDNSRRLTGQHETSSIHEFSAGVANRGASIRIPRQVGQEGYGYFEDRRPAANCDPYAVT 352
Query: 542 ERIVRTTILED 574
E +VRTTIL +
Sbjct: 353 EALVRTTILNE 363
>sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 306 bits (784), Expect = 3e-83
Identities = 139/191 (72%), Positives = 164/191 (85%)
Frame = +2
Query: 2 RDIIEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDF 181
RDI+EAHY+ACL+AGIKIAGTNAEVMPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDF
Sbjct: 173 RDIVEAHYRACLYAGIKIAGTNAEVMPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDF 232
Query: 182 GVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHK 361
GV+ +FDPKPI G+WNGAG HTN+ST MR G+KYIEE+IEK+SKRH HI AYDP
Sbjct: 233 GVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEESIEKLSKRHQYHIRAYDPKG 292
Query: 362 GEDNRRRLTGRHETSTIDDFSSGVANRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVT 541
G DN RRLTG HETS I+DFS+GVANRGASIRIPR V ++ GY EDRRPS+NCDP+SVT
Sbjct: 293 GLDNARRLTGFHETSNINDFSAGVANRGASIRIPRTVGQEKKGYFEDRRPSANCDPFSVT 352
Query: 542 ERIVRTTILED 574
E ++RT +L +
Sbjct: 353 EALIRTCLLNE 363
>sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 305 bits (782), Expect = 5e-83
Identities = 139/191 (72%), Positives = 162/191 (84%)
Frame = +2
Query: 2 RDIIEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDF 181
RDI+EAHY+ACL+AG+KI GTNAEVMPAQWEFQIGPCEGI + DHLW+AR++LHRV EDF
Sbjct: 173 RDIVEAHYRACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWVARFILHRVCEDF 232
Query: 182 GVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHK 361
GV+ +FDPKPI G+WNGAG HTN+ST MR G+KYIEEAI+K+SKRH HI AYDP
Sbjct: 233 GVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIDKLSKRHQYHIRAYDPKG 292
Query: 362 GEDNRRRLTGRHETSTIDDFSSGVANRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVT 541
G DN RRLTG HETS I+DFS+GVANRGASIRIPR V ++ GY EDRRPS+NCDPY+VT
Sbjct: 293 GLDNARRLTGFHETSNINDFSAGVANRGASIRIPRTVGQEKRGYFEDRRPSANCDPYAVT 352
Query: 542 ERIVRTTILED 574
E IVRT +L +
Sbjct: 353 EAIVRTCLLNE 363
>sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 305 bits (780), Expect = 9e-83
Identities = 138/191 (72%), Positives = 163/191 (85%)
Frame = +2
Query: 2 RDIIEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDF 181
RDI+EAHY+ACL+AG+KIAGTNAEVMPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDF
Sbjct: 173 RDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDF 232
Query: 182 GVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHK 361
GV+ +FDPKPI G+WNGAG HTN+ST MR G+KYIEEAIEK+SKRH HI AYDP
Sbjct: 233 GVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKG 292
Query: 362 GEDNRRRLTGRHETSTIDDFSSGVANRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVT 541
G DN RRLTG HETS I+DFS+GVANR ASIRIPR V ++ GY EDRRPS+NCDP+SVT
Sbjct: 293 GLDNARRLTGFHETSNINDFSAGVANRSASIRIPRTVGQEKKGYFEDRRPSANCDPFSVT 352
Query: 542 ERIVRTTILED 574
E ++RT +L +
Sbjct: 353 EALIRTCLLNE 363
>sp|Q4R7U3|GLNA_MACFA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 374
Score = 305 bits (780), Expect = 9e-83
Identities = 138/191 (72%), Positives = 163/191 (85%)
Frame = +2
Query: 2 RDIIEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDF 181
RDI+EAHY+ACL+AG+KIAGTNAEVMPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDF
Sbjct: 174 RDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDF 233
Query: 182 GVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHK 361
GV+ +FDPKPI G+WNGAG HTN+ST MR G+KYIEEAIEK+SKRH HI AYDP
Sbjct: 234 GVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKG 293
Query: 362 GEDNRRRLTGRHETSTIDDFSSGVANRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVT 541
G DN RRLTG HETS I+DFS+GVANR ASIRIPR V ++ GY EDRRPS+NCDP+SVT
Sbjct: 294 GLDNARRLTGFHETSNINDFSAGVANRSASIRIPRTVGQEKKGYFEDRRPSANCDPFSVT 353
Query: 542 ERIVRTTILED 574
E ++RT +L +
Sbjct: 354 EALIRTCLLNE 364
>sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 304 bits (778), Expect = 2e-82
Identities = 138/191 (72%), Positives = 162/191 (84%)
Frame = +2
Query: 2 RDIIEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDF 181
RDI+EAHY+ACL+AG+KI GTNAEVMPAQWEFQ+GPCEGI + DHLW+AR++LHRV EDF
Sbjct: 173 RDIVEAHYRACLYAGVKIGGTNAEVMPAQWEFQVGPCEGIEMGDHLWIARFILHRVCEDF 232
Query: 182 GVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHK 361
GV+VSFDPKPI G+WNGAG HTN+ST MR GG+K+IEEAIEK+SKRH HI AYDP
Sbjct: 233 GVIVSFDPKPIPGNWNGAGCHTNFSTKNMREDGGLKHIEEAIEKLSKRHQYHIRAYDPKG 292
Query: 362 GEDNRRRLTGRHETSTIDDFSSGVANRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVT 541
G DN RRLTG HETS+I +FS+GVANRGASIRIPR V + GY EDR PS+NCDPY+VT
Sbjct: 293 GLDNARRLTGFHETSSIHEFSAGVANRGASIRIPRNVGHEKKGYFEDRGPSANCDPYAVT 352
Query: 542 ERIVRTTILED 574
E +VRT +L +
Sbjct: 353 EALVRTCLLNE 363
>sp|P46410|GLNA_PIG Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 302 bits (773), Expect = 6e-82
Identities = 137/191 (71%), Positives = 162/191 (84%)
Frame = +2
Query: 2 RDIIEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDF 181
RDI+EAHY+ACL+AGIKI GTNAEVMPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDF
Sbjct: 173 RDIVEAHYRACLYAGIKIGGTNAEVMPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDF 232
Query: 182 GVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHK 361
GV+ +FDPKPI G+WNGAG HTN+ST MR G+KYIEEAIEK+SKRH HI AYDP
Sbjct: 233 GVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKG 292
Query: 362 GEDNRRRLTGRHETSTIDDFSSGVANRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVT 541
G DN RRLTG HETS I+DFS+GVANRGASIRIPR ++ GY EDRRPS+NCDP++VT
Sbjct: 293 GLDNTRRLTGFHETSNINDFSAGVANRGASIRIPRTGGQEKKGYFEDRRPSANCDPFAVT 352
Query: 542 ERIVRTTILED 574
E ++RT +L +
Sbjct: 353 EALIRTCLLNE 363
>sp|P15105|GLNA_MOUSE Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 301 bits (771), Expect = 1e-81
Identities = 137/191 (71%), Positives = 161/191 (84%)
Frame = +2
Query: 2 RDIIEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDF 181
RDI+EAHY+ACL+AG+KI GTNAEVMPAQWEFQIGPCEGI + DHLW+AR++LHRV EDF
Sbjct: 173 RDIVEAHYRACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWIARFILHRVCEDF 232
Query: 182 GVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHK 361
GV+ +FDPKPI G+WNGAG HTN+ST MR G+K+IEEAI+K+SKRH HI AYDP
Sbjct: 233 GVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKWIEEAIDKLSKRHQYHIRAYDPKG 292
Query: 362 GEDNRRRLTGRHETSTIDDFSSGVANRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVT 541
G DN R LTG HETS I+DFS+GVANRGASIRIPR V ++ GY EDRRPS+NCDPY+VT
Sbjct: 293 GLDNARALTGFHETSNINDFSAGVANRGASIRIPRTVGQEKKGYFEDRRPSANCDPYAVT 352
Query: 542 ERIVRTTILED 574
E IVRT +L +
Sbjct: 353 EAIVRTCLLNE 363
>sp|P20478|GLNA2_DROME Glutamine synthetase 2, cytoplasmic (Glutamate--ammonia ligase 2)
Length = 369
Score = 300 bits (769), Expect = 2e-81
Identities = 134/191 (70%), Positives = 165/191 (86%)
Frame = +2
Query: 2 RDIIEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDF 181
RDI++AHY+ACL+AGIK++GTNAEVMPAQWEFQ+GPCEGI++ D LWMAR+LLHR++E+F
Sbjct: 179 RDIVDAHYRACLYAGIKVSGTNAEVMPAQWEFQVGPCEGISIGDDLWMARFLLHRISEEF 238
Query: 182 GVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHK 361
G+V + DPKP+ GDWNGAGAHTN ST MR GGI+ IE+A+ K+SK H HI AYDP +
Sbjct: 239 GIVSTLDPKPMPGDWNGAGAHTNVSTKAMREDGGIRDIEKAVAKLSKCHERHIRAYDPKQ 298
Query: 362 GEDNRRRLTGRHETSTIDDFSSGVANRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVT 541
G+DN RRLTG+HETS+I+DFS+GVANRG SIRIPR V++DG GY EDRRPSSNCDPYSV
Sbjct: 299 GQDNARRLTGKHETSSINDFSAGVANRGCSIRIPRGVNDDGKGYFEDRRPSSNCDPYSVV 358
Query: 542 ERIVRTTILED 574
E I+RT L++
Sbjct: 359 EAILRTICLDE 369
>sp|P09606|GLNA_RAT Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 298 bits (763), Expect = 9e-81
Identities = 137/191 (71%), Positives = 160/191 (83%)
Frame = +2
Query: 2 RDIIEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDF 181
RDI+EAHY+ACL+AGIKI GTNAEVMPAQWEFQIGPCEGI + DHLW+AR++LHRV EDF
Sbjct: 173 RDIVEAHYRACLYAGIKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWVARFILHRVCEDF 232
Query: 182 GVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHK 361
GV+ +FDPKPI G+WNGAG HTN+ST MR G++ IEEAI+K+SKRH HI AYDP
Sbjct: 233 GVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLRCIEEAIDKLSKRHQYHIRAYDPKG 292
Query: 362 GEDNRRRLTGRHETSTIDDFSSGVANRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVT 541
G DN RRLTG HETS I+DFS+GVANR ASIRIPR V ++ GY EDRRPS+NCDPY+VT
Sbjct: 293 GLDNARRLTGFHETSNINDFSAGVANRSASIRIPRIVGQEKKGYFEDRRPSANCDPYAVT 352
Query: 542 ERIVRTTILED 574
E IVRT +L +
Sbjct: 353 EAIVRTCLLNE 363
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,776,554
Number of Sequences: 369166
Number of extensions: 1470689
Number of successful extensions: 4388
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4303
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5657676120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)