Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_G13-1
(190 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P18601|ACT2_ARTSX Actin, clone 211 69 4e-12
sp|P53471|ACT2_SCHMA Actin-2 69 4e-12
sp|P02574|ACT4_DROME Actin, larval muscle (Actin-79B) 69 4e-12
sp|P53470|ACT1_SCHMA Actin-1 69 4e-12
sp|P83968|ACT6_DROSI Actin, indirect flight muscle (Actin-8... 69 4e-12
sp|P10981|ACT5_DROME Actin-87E 69 4e-12
sp|P68556|ACT1_DIPDE Actin-1/4 >gi|55976640|sp|P68555|ACT_T... 69 4e-12
sp|P90689|ACT_BRUMA Actin 69 4e-12
sp|P18600|ACT1_ARTSX Actin, clone 205 69 4e-12
sp|P07837|ACT2_BOMMO Actin, muscle A2 69 4e-12
>sp|P18601|ACT2_ARTSX Actin, clone 211
Length = 376
Score = 68.6 bits (166), Expect = 4e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 1 ILASLSTFQQMWISKQEYDESGPGIVHRKCF 93
ILASLSTFQQMWISKQEYDESGPGIVHRKCF
Sbjct: 346 ILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
>sp|P53471|ACT2_SCHMA Actin-2
Length = 376
Score = 68.6 bits (166), Expect = 4e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 1 ILASLSTFQQMWISKQEYDESGPGIVHRKCF 93
ILASLSTFQQMWISKQEYDESGPGIVHRKCF
Sbjct: 346 ILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
>sp|P02574|ACT4_DROME Actin, larval muscle (Actin-79B)
Length = 376
Score = 68.6 bits (166), Expect = 4e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 1 ILASLSTFQQMWISKQEYDESGPGIVHRKCF 93
ILASLSTFQQMWISKQEYDESGPGIVHRKCF
Sbjct: 346 ILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
>sp|P53470|ACT1_SCHMA Actin-1
Length = 376
Score = 68.6 bits (166), Expect = 4e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 1 ILASLSTFQQMWISKQEYDESGPGIVHRKCF 93
ILASLSTFQQMWISKQEYDESGPGIVHRKCF
Sbjct: 346 ILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
>sp|P83968|ACT6_DROSI Actin, indirect flight muscle (Actin-88F)
sp|P83967|ACT6_DROME Actin, indirect flight muscle (Actin-88F)
sp|P83969|ACT1_BACDO Actin, indirect flight muscle
Length = 376
Score = 68.6 bits (166), Expect = 4e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 1 ILASLSTFQQMWISKQEYDESGPGIVHRKCF 93
ILASLSTFQQMWISKQEYDESGPGIVHRKCF
Sbjct: 346 ILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
>sp|P10981|ACT5_DROME Actin-87E
Length = 376
Score = 68.6 bits (166), Expect = 4e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 1 ILASLSTFQQMWISKQEYDESGPGIVHRKCF 93
ILASLSTFQQMWISKQEYDESGPGIVHRKCF
Sbjct: 346 ILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
>sp|P68556|ACT1_DIPDE Actin-1/4
sp|P68555|ACT_TAESO Actin
Length = 376
Score = 68.6 bits (166), Expect = 4e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 1 ILASLSTFQQMWISKQEYDESGPGIVHRKCF 93
ILASLSTFQQMWISKQEYDESGPGIVHRKCF
Sbjct: 346 ILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
>sp|P90689|ACT_BRUMA Actin
Length = 376
Score = 68.6 bits (166), Expect = 4e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 1 ILASLSTFQQMWISKQEYDESGPGIVHRKCF 93
ILASLSTFQQMWISKQEYDESGPGIVHRKCF
Sbjct: 346 ILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
>sp|P18600|ACT1_ARTSX Actin, clone 205
Length = 376
Score = 68.6 bits (166), Expect = 4e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 1 ILASLSTFQQMWISKQEYDESGPGIVHRKCF 93
ILASLSTFQQMWISKQEYDESGPGIVHRKCF
Sbjct: 346 ILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
>sp|P07837|ACT2_BOMMO Actin, muscle A2
Length = 376
Score = 68.6 bits (166), Expect = 4e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 1 ILASLSTFQQMWISKQEYDESGPGIVHRKCF 93
ILASLSTFQQMWISKQEYDESGPGIVHRKCF
Sbjct: 346 ILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,995,377
Number of Sequences: 369166
Number of extensions: 291561
Number of successful extensions: 974
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 68,354,980
effective HSP length: 35
effective length of database: 61,889,255
effective search space used: 1671009885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)