Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_F13
(898 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3) 589 e-168
sp|P30163|ACT2_ONCVO Actin-2 589 e-168
sp|P30162|ACT1_ONCVO Actin-1 589 e-168
sp|O93400|ACTB_XENLA Actin, cytoplasmic 1 (Beta-actin) (Cyt... 588 e-168
sp|P41340|ACT3_LIMPO Actin-3 588 e-168
sp|O42161|ACTB_SALSA Actin, cytoplasmic 1 (Beta-actin) 588 e-168
sp|P68143|ACTB_OREMO Actin, cytoplasmic 1 (Beta-actin) >gi|... 588 e-168
sp|P79818|ACTB_ORYLA Actin, cytoplasmic 1 (Beta-actin) (OlCA1) 588 e-168
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 588 e-168
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 588 e-168
>sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3)
Length = 375
Score = 589 bits (1519), Expect = e-168
Identities = 288/299 (96%), Positives = 294/299 (98%)
Frame = +1
Query: 1 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 180
MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI
Sbjct: 16 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 75
Query: 181 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVA 360
VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVA
Sbjct: 76 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 135
Query: 361 IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 540
IQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE
Sbjct: 136 IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 195
Query: 541 RGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERF 720
RGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TAS+SSSLEKSYELPDGQVITIGNERF
Sbjct: 196 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATASSSSSLEKSYELPDGQVITIGNERF 255
Query: 721 RCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQ 897
RCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGG+TMYPGIADRMQ
Sbjct: 256 RCPEALFQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQ 314
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 589 bits (1519), Expect = e-168
Identities = 287/299 (95%), Positives = 294/299 (98%)
Frame = +1
Query: 1 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 180
MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI
Sbjct: 17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 76
Query: 181 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVA 360
VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVA
Sbjct: 77 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 136
Query: 361 IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 540
IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE
Sbjct: 137 IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 196
Query: 541 RGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERF 720
RGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVIT+GNERF
Sbjct: 197 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERF 256
Query: 721 RCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQ 897
RCPEALFQPSFLG+ES GIHETTYNSIMKCD+DIRKDLYAN VLSGGSTMYPGIADRMQ
Sbjct: 257 RCPEALFQPSFLGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGSTMYPGIADRMQ 315
>sp|P30162|ACT1_ONCVO Actin-1
Length = 376
Score = 589 bits (1519), Expect = e-168
Identities = 286/299 (95%), Positives = 295/299 (98%)
Frame = +1
Query: 1 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 180
MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI
Sbjct: 17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 76
Query: 181 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVA 360
VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVA
Sbjct: 77 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 136
Query: 361 IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 540
IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE
Sbjct: 137 IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 196
Query: 541 RGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERF 720
RGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVIT+GNERF
Sbjct: 197 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERF 256
Query: 721 RCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQ 897
RCPEALFQPSFLG+ES GIHE+TYNSIMKCD+DIRKDLYANIVLSGG+TMYPGIADRMQ
Sbjct: 257 RCPEALFQPSFLGMESAGIHESTYNSIMKCDIDIRKDLYANIVLSGGTTMYPGIADRMQ 315
>sp|O93400|ACTB_XENLA Actin, cytoplasmic 1 (Beta-actin) (Cytoplasmic beta actin)
Length = 375
Score = 588 bits (1517), Expect = e-168
Identities = 287/299 (95%), Positives = 294/299 (98%)
Frame = +1
Query: 1 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 180
MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI
Sbjct: 16 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 75
Query: 181 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVA 360
VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVA
Sbjct: 76 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 135
Query: 361 IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 540
IQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE
Sbjct: 136 IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 195
Query: 541 RGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERF 720
RGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVITIGNERF
Sbjct: 196 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERF 255
Query: 721 RCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQ 897
RCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGG+TMYPGIADRMQ
Sbjct: 256 RCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQ 314
>sp|P41340|ACT3_LIMPO Actin-3
Length = 376
Score = 588 bits (1517), Expect = e-168
Identities = 287/299 (95%), Positives = 294/299 (98%)
Frame = +1
Query: 1 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 180
MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI
Sbjct: 17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 76
Query: 181 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVA 360
VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVA
Sbjct: 77 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 136
Query: 361 IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 540
IQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE
Sbjct: 137 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 196
Query: 541 RGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERF 720
RGYSFTTTAEREIVRDIKEKLCY+ALDFD EM TA++SSSLEKSYELPDGQVITIGNERF
Sbjct: 197 RGYSFTTTAEREIVRDIKEKLCYVALDFDQEMATAASSSSLEKSYELPDGQVITIGNERF 256
Query: 721 RCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQ 897
RCPEALFQPSFLG+ES GIHETTYNSIMKCD+DIRKDLYAN VLSGG+TMYPGIADRMQ
Sbjct: 257 RCPEALFQPSFLGMESSGIHETTYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQ 315
>sp|O42161|ACTB_SALSA Actin, cytoplasmic 1 (Beta-actin)
Length = 375
Score = 588 bits (1516), Expect = e-168
Identities = 287/299 (95%), Positives = 294/299 (98%)
Frame = +1
Query: 1 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 180
MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI
Sbjct: 16 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 75
Query: 181 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVA 360
VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVA
Sbjct: 76 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 135
Query: 361 IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 540
IQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE
Sbjct: 136 IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 195
Query: 541 RGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERF 720
RGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVITIGNERF
Sbjct: 196 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERF 255
Query: 721 RCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQ 897
RCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGG+TMYPGIADRMQ
Sbjct: 256 RCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQ 314
>sp|P68143|ACTB_OREMO Actin, cytoplasmic 1 (Beta-actin)
sp|P68142|ACT1_FUGRU Actin, cytoplasmic 1 (Beta-actin-1)
Length = 375
Score = 588 bits (1516), Expect = e-168
Identities = 287/299 (95%), Positives = 294/299 (98%)
Frame = +1
Query: 1 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 180
MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI
Sbjct: 16 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 75
Query: 181 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVA 360
VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVA
Sbjct: 76 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 135
Query: 361 IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 540
IQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE
Sbjct: 136 IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 195
Query: 541 RGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERF 720
RGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVITIGNERF
Sbjct: 196 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERF 255
Query: 721 RCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQ 897
RCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGG+TMYPGIADRMQ
Sbjct: 256 RCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQ 314
>sp|P79818|ACTB_ORYLA Actin, cytoplasmic 1 (Beta-actin) (OlCA1)
Length = 375
Score = 588 bits (1516), Expect = e-168
Identities = 286/299 (95%), Positives = 295/299 (98%)
Frame = +1
Query: 1 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 180
MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI
Sbjct: 16 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 75
Query: 181 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVA 360
VTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVA
Sbjct: 76 VTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 135
Query: 361 IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 540
IQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE
Sbjct: 136 IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 195
Query: 541 RGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERF 720
RGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVITIGNERF
Sbjct: 196 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERF 255
Query: 721 RCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQ 897
RCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGG+TMYPGIADRMQ
Sbjct: 256 RCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQ 314
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 588 bits (1516), Expect = e-168
Identities = 286/299 (95%), Positives = 294/299 (98%)
Frame = +1
Query: 1 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 180
MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI
Sbjct: 17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 76
Query: 181 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVA 360
VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVA
Sbjct: 77 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 136
Query: 361 IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 540
IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTE
Sbjct: 137 IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTE 196
Query: 541 RGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERF 720
RGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNERF
Sbjct: 197 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERF 256
Query: 721 RCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQ 897
RCPEA+FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQ
Sbjct: 257 RCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQ 315
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 588 bits (1516), Expect = e-168
Identities = 286/299 (95%), Positives = 295/299 (98%)
Frame = +1
Query: 1 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 180
MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI
Sbjct: 17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 76
Query: 181 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVA 360
VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVA
Sbjct: 77 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 136
Query: 361 IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 540
IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTE
Sbjct: 137 IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTE 196
Query: 541 RGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERF 720
RGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSYELPDGQVITIGNERF
Sbjct: 197 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYELPDGQVITIGNERF 256
Query: 721 RCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQ 897
RCPEALFQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQ
Sbjct: 257 RCPEALFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQ 315
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,813,512
Number of Sequences: 369166
Number of extensions: 2191639
Number of successful extensions: 6995
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6822
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9030416440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)