Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_E11
(929 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P76052|ABGB_ECOLI Aminobenzoyl-glutamate utilization pro... 122 1e-27
sp|O34980|YTNL_BACSU Hypothetical protein ytnL 88 3e-17
sp|P55663|Y4TI_RHISN Hypothetical hydrolase Y4TI 78 3e-14
sp|P54983|AMHX_BACSU Amidohydrolase amhX (Aminoacylase) 78 3e-14
sp|P54968|ILR1_ARATH IAA-amino acid hydrolase 1 74 4e-13
sp|O50173|IAAH_ENTAG Indole-3-acetyl-aspartic acid hydrolas... 74 8e-13
sp|P54970|ILL2_ARATH IAA-amino acid hydrolase homolog 2 pre... 68 3e-11
sp|P54969|ILR3_ARATH IAA-amino acid hydrolase 3 precursor 65 2e-10
sp|P58156|CBPX2_SULSO Thermostable carboxypeptidase 2 63 1e-09
sp|P44765|ABGA_HAEIN Aminobenzoyl-glutamate utilization pro... 62 2e-09
>sp|P76052|ABGB_ECOLI Aminobenzoyl-glutamate utilization protein B
Length = 481
Score = 122 bits (306), Expect = 1e-27
Identities = 88/277 (31%), Positives = 132/277 (47%), Gaps = 20/277 (7%)
Frame = +1
Query: 70 NAIDKDAEELYALSNYLHCNPEISFNEYKAHDYICSYLEKKGFKVERHF-KLETGFVAVY 246
+AI+ D + +++ + +PE F E+ + +++ S LE GF V R+ + F+A +
Sbjct: 10 DAIEADRQRYTDIADQIWDHPETRFEEFWSAEHLASALESAGFTVTRNVGNIPNAFIASF 69
Query: 247 ETALQPHLVILVEMDALPII-----------------GHACGHNLIAECSVAAGIGLMQI 375
+P + +L E DAL + GH CGHNL+ + AA I + +
Sbjct: 70 GQG-KPVIALLGEYDALAGLSQQAGCAQPTSVTPGENGHGCGHNLLGTAAFAAAIAVKKW 128
Query: 376 MKTYNLKGKLSLLGTPGEEDWGGKIKYVSEGFFKDVDAAVMCHP-SIKNVVHKTHLALSQ 552
++ Y G + G PGEE GK V EG F DVDAA+ HP + + + LA Q
Sbjct: 129 LEQYGQGGTVRFYGCPGEEGGSGKTFMVREGVFDDVDAALTWHPEAFAGMFNTRTLANIQ 188
Query: 553 YKISFFGKEAHAAGSPWMGINALDAAVLAYQSVSCLRQQIHPDCRIN-GIFIHGGVSTNV 729
F G AHAA SP +G +ALDA L + L + I R++ I GG+S NV
Sbjct: 189 ASWRFKGIAAHAANSPHLGRSALDAVTLMTTGTNFLNEHIIEKARVHYAITNSGGISPNV 248
Query: 730 IPNYTEMEYEIRAITSDELNRITPKVLACFHSAAQAT 840
+ E+ Y IRA ++ I +V AA T
Sbjct: 249 VQAQAEVLYLIRAPEMTDVQHIYDRVAKIAEGAALMT 285
>sp|O34980|YTNL_BACSU Hypothetical protein ytnL
Length = 416
Score = 88.2 bits (217), Expect = 3e-17
Identities = 83/293 (28%), Positives = 137/293 (46%), Gaps = 31/293 (10%)
Frame = +1
Query: 91 EELYALSNYLHCNPEISFNEYKAHDYICSYLEKKGFKVERHFKLETG-FVAVYETALQPH 267
++L + +LH PE+S E++ +I L++KG ++ R L+TG F + + P
Sbjct: 39 KQLIGIRRHLHQYPELSKEEFETTAFIKKCLKEKGIQI-RPTALKTGVFADIAGESEGPA 97
Query: 268 LVILVEMDALPI--------------IGHACGHNLIAECSVAAGIGLMQIMKTY--NLKG 399
+ + ++DALPI I HACGH+ AA +G ++K +LKG
Sbjct: 98 IALRADIDALPIEEKTGLPYASKHKGIMHACGHDF----HTAALLGAAFLLKENQDSLKG 153
Query: 400 KLSLLGTPGEEDWGGKIKYVSEGFFKDVDAAVMCHP----SIKNVVHKT---HLALSQYK 558
K+ LL P EE G K + +G +DA + H ++ V KT A+ ++K
Sbjct: 154 KIRLLFQPAEEAGAGATKVIEDGQLDGIDAVIGLHNKPDIAVGTVGLKTGPLMAAVDRFK 213
Query: 559 ISFFGKEAHAA-----GSPWMGINALDAAV--LAYQSVSCLRQQIHPDCRINGIFIHGGV 717
+ GK AHAA P +G + L A+ + ++V+ L+ I +IN GG
Sbjct: 214 VEIEGKGAHAALPHNGFDPIIGASQLIVALQTIVSRNVNPLQSAILTVGKIN-----GGS 268
Query: 718 STNVIPNYTEMEYEIRAITSDELNRITPKVLACFHSAAQATGCQVNVTIKSPP 876
+ NVIP+ +E +R S+ N++ + A + A + NV S P
Sbjct: 269 TWNVIPDTVVIEGTVRTFDSEVRNQVKQRFFAVTEQISAAFSLKANVKWHSGP 321
>sp|P55663|Y4TI_RHISN Hypothetical hydrolase Y4TI
Length = 402
Score = 78.2 bits (191), Expect = 3e-14
Identities = 94/331 (28%), Positives = 145/331 (43%), Gaps = 39/331 (11%)
Frame = +1
Query: 43 SMNFKEVGFNAIDKDAEELYALSNYLHCNPEISFNEYKAHDYICSYLEKKGFKVERHFKL 222
+MNF+ I+ + + + L + +H PE+S NE+K I LE+ G K F
Sbjct: 4 AMNFRINNSLLIEAERDAVLELRHAMHREPELSNNEWKTQQRIRGMLERFGLKGATVFHN 63
Query: 223 ETGFVAVYETALQPHLVILV--EMDALPI---------------IGHACGHNLIAECSVA 351
++ + +A P + V ++DALPI + HACGH+L A S+A
Sbjct: 64 TGLYIDIEGSASGPKRAVAVRGDIDALPIQETRDDLPYQSHVEGVMHACGHDLHA--SIA 121
Query: 352 AGIGLMQIMKTYNLKGKLSLLGTPGE--EDWGGKIKYVSEGFFKDVDAAVMCH--PSI-- 513
G+ L N GKL + P E E GG+ + E + D AV H PSI
Sbjct: 122 MGVALAFHRMRNNFAGKLRVFFQPAEEAEPLGGR-TVLEERLLEGFDNAVGFHVTPSIQV 180
Query: 514 ------KNVVHKTHLALSQYKISFFGKEAHAAGSPWMGINALD-AAVLAYQSVSCLRQQI 672
+ V K+ Q+K++ G AH + +P GI+A+ AA + + +++
Sbjct: 181 GKFGAREGAVSKSS---DQFKVTVSGSAAHGS-TPHNGIDAITIAAAFVNEVQKVISREV 236
Query: 673 HPDCR--INGIFIHGGVSTNVIPNYTEME-------YEIRAITSDELNRITPKVLACFHS 825
D R I IHGG +TN+I ME E+R + S + I V A
Sbjct: 237 PVDDRSVITIGTIHGGEATNIICPKVVMEGTIRTTNPELRPLLSQRVREIAEGVAALHRG 296
Query: 826 AAQATGCQVNVTIKSPPFENLISNKCLIRLF 918
A +V VT P +I++ ++RLF
Sbjct: 297 KA-----EVVVTSGEPA---VINDPEMVRLF 319
>sp|P54983|AMHX_BACSU Amidohydrolase amhX (Aminoacylase)
Length = 389
Score = 78.2 bits (191), Expect = 3e-14
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 23/271 (8%)
Frame = +1
Query: 115 YLHCNPEISFNEYKAHDYICSYLEKKGFKVERHFKLETGFVAVYETALQPHLVILVEMDA 294
+LH NPE+S+ EY+ ++ LE G + R F TG V + P + + ++DA
Sbjct: 18 HLHANPEVSWKEYETTSFLKQKLEDLGCRT-RTFSDCTGVVGEIGSG-SPVVAVRADIDA 75
Query: 295 L--PIIG-----HACGHNLIAECSVAAGIGLMQIMKTYNL-KGKLSLLGTPGEEDWGGKI 450
L + G H+CGH+ + ++A G LM + K L KG + + P EE GG +
Sbjct: 76 LWQEVNGTFRANHSCGHD--SHMTMALGT-LMLLKKQPELPKGTIRFIFQPAEEKGGGAL 132
Query: 451 KYVSEGFFKDVDAAV-------------MCHPSIKNVVHKTHLALSQYKISFFGKEAHAA 591
K + EG D+D C PSI H + + + G+EAH A
Sbjct: 133 KMIEEGVLDDIDYLYGVHVRPIQETQNGRCAPSI------LHGSSQHIEGTIIGEEAHGA 186
Query: 592 GSPWMGINALDAAVLAYQSVSCLR--QQIHPDCRINGIFIHGGVSTNVIPNYTEMEYEIR 765
P +G N+++ A + + QI ++ + GG S+N+IP ++R
Sbjct: 187 -RPHLGKNSIEIAAFLVHKLGLIHIDPQIPHTVKMTKLQA-GGESSNIIPGKASFSLDLR 244
Query: 766 AITSDELNRITPKVLACFHSAAQATGCQVNV 858
A T++ + + + +AA A G ++ +
Sbjct: 245 AQTNEAMEALIAETERACEAAAAAFGAKIEL 275
>sp|P54968|ILR1_ARATH IAA-amino acid hydrolase 1
Length = 442
Score = 74.3 bits (181), Expect = 4e-13
Identities = 73/298 (24%), Positives = 138/298 (46%), Gaps = 29/298 (9%)
Frame = +1
Query: 91 EELYALSNYLHCNPEISFNEYKAHDYICSYLEKKGFKVERHFKLETGFVAVYETALQPHL 270
E + + +H NPE F E+K + L+ G K ++ +TG VA + +P
Sbjct: 50 EWMRGIRRKIHENPETGFQEFKTSQLVRDELDSLGVKY-KYPVAKTGVVAWIGSCSKPVF 108
Query: 271 VILVEMDALPIIG--------------HACGHNLIAECSVAAGIGLMQIMKT--YNLKGK 402
+ +MDALP+ HACGH + VA +G ++++T + +KG
Sbjct: 109 GLRADMDALPLQELVEWESKSKVDGKMHACGH----DTHVAMLLGAAKLLQTTKHLIKGT 164
Query: 403 LSLLGTPGEEDWGGKIKYVSEGFFKDVDAAVMCH--PSIKN--VVHKTHLALS---QYKI 561
+ L+ PGEE + G + + + D+D + H PSI + + + L+ + +
Sbjct: 165 VKLVFQPGEEGYAGAYEMLKDEILDDLDGILSVHVFPSIPSGGIGSRPGTVLAGAGLFTV 224
Query: 562 SFFGKEAHAAGSPWM--GINALDAAVLAYQSVSCLRQQIHP-DCRINGI-FIHGGVSTNV 729
+ G+ +HAA + + A +AV+A Q + + +++ P + + + +I GG + NV
Sbjct: 225 TVHGQGSHAATPHFSKDPVLAASSAVVALQQI--VSRELDPLEAGVVTVGYIEGGHAQNV 282
Query: 730 IPNYTEMEYEIRAITSDELNRITPKVLACFHSAAQATGC--QVNVTIKSPPFENLISN 897
IP + R++++D L I ++ + A C +VN K P +++N
Sbjct: 283 IPQSAKFGGTFRSLSNDGLLFIQRRIKEISEAQASVYRCKAEVNFEEKKPSLHPVMNN 340
>sp|O50173|IAAH_ENTAG Indole-3-acetyl-aspartic acid hydrolase (IAA-Asp hydrolase)
Length = 436
Score = 73.6 bits (179), Expect = 8e-13
Identities = 69/243 (28%), Positives = 98/243 (40%), Gaps = 30/243 (12%)
Frame = +1
Query: 226 TGFVAVYETALQ-PHLVILVEMDAL---------------------PIIGHACGHNLIAE 339
TG VA +T P L V+MDAL P + HACGH +
Sbjct: 96 TGIVATLDTGRPGPTLAFRVDMDALDLNEDTDGHHRPFREDFASCNPGMMHACGH----D 151
Query: 340 CSVAAGIGLMQIMKTY--NLKGKLSLLGTPGEEDWGGKIKYVSEGFFKDVDAAVMCH--- 504
A G+GL ++K Y L G + L+ P EE G V+ G DVD H
Sbjct: 152 GHTAIGLGLAHVLKQYADRLHGVIKLIFQPAEEGTRGARAMVAAGVVDDVDYFTAIHIGT 211
Query: 505 --PSIKNVVHKTH-LALSQYKISFFGKEAHAAGSPWMGINALDAAVLAYQSVSCLRQQIH 675
P+ V + +A +++ F G AHA G P G NAL AA A ++ +
Sbjct: 212 GVPAGTVVCGSDNFMATTKFDALFTGVAAHAGGKPEDGRNALLAAAQAAIALHAIAPHSA 271
Query: 676 PDCRINGIFIHGGVSTNVIPNYTEMEYEIRAITSDELNRITPKVLACFHSAAQATGCQVN 855
R+N + G NV+P+ ++ E R T D + + H AA G V
Sbjct: 272 GASRVNVGVMQAGTGRNVVPSGALLKVETRGETEDINRYVFERAREVIHGAAAMYGASVE 331
Query: 856 VTI 864
+ +
Sbjct: 332 LRL 334
>sp|P54970|ILL2_ARATH IAA-amino acid hydrolase homolog 2 precursor
Length = 439
Score = 68.2 bits (165), Expect = 3e-11
Identities = 76/298 (25%), Positives = 122/298 (40%), Gaps = 28/298 (9%)
Frame = +1
Query: 118 LHCNPEISFNEYKAHDYICSYLEKKGFKVERHFKLETGFVAVYETALQPHLVILVEMDAL 297
+H NPE+ + E + I S LE G K R+ TG + T P + + +MDAL
Sbjct: 58 IHENPELGYEELETSKLIRSELELIGIKY-RYPVAITGVIGYIGTGEPPFVALRADMDAL 116
Query: 298 PIIG--------------HACGHNLIAECSVAAGIGLMQIMKTYNLKGKLSLLGTPGEED 435
PI HACGH+ ++ G + ++L+G + L+ P EE
Sbjct: 117 PIQEGVEWEHKSKIAGKMHACGHD--GHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEG 174
Query: 436 WGGKIKYVSEGFFKDVDAAVMCHPSIKNVVHKTH-------LALSQYKISFFGKEAHAAG 594
G K EG K+V+A H S + K ++ GK HAA
Sbjct: 175 LSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAA- 233
Query: 595 SPWMGINALDAAVLAYQSVSCLRQQIHP-----DCRINGIF-IHGGVSTNVIPNYTEMEY 756
+ + +D V A V L+Q + D ++ + ++GG + NVIP+ +
Sbjct: 234 ---IPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGGNAFNVIPDSITIGG 290
Query: 757 EIRAITSDELNRITPKVLACFHSAAQATGCQVNVTIKS-PPFENLISNKCLIRLFEKM 927
+RA T + K + +A VN+T P ++NK L + F+K+
Sbjct: 291 TLRAFTGFTQLQQRVKEVITKQAAVHRCNASVNLTPNGREPMPPTVNNKDLYKQFKKV 348
>sp|P54969|ILR3_ARATH IAA-amino acid hydrolase 3 precursor
Length = 438
Score = 65.5 bits (158), Expect = 2e-10
Identities = 74/308 (24%), Positives = 129/308 (41%), Gaps = 29/308 (9%)
Frame = +1
Query: 91 EELYALSNYLHCNPEISFNEYKAHDYICSYLEKKGFKVERHFKLETGFVAVYETALQPHL 270
+ + + +H NPE+ + E++ +I S L+ G K + TG + T P +
Sbjct: 48 DSMVRIRRKIHENPELGYEEFETSKFIRSELDLIGVKYRFPVAI-TGIIGYIGTGEPPFV 106
Query: 271 VILVEMDALPIIG--------------HACGHNLIAECSVAAGIGLMQIMKTY--NLKGK 402
+ +MDALPI HACGH + VA +G +I++ + +L+G
Sbjct: 107 ALRADMDALPIQEAVEWEHKSKNPGKMHACGH----DGHVAMLLGAAKILQQHRQHLQGT 162
Query: 403 LSLLGTPGEEDWGGKIKYVSEGFFKDVDAAVMCHPSIKNVVHKT-------HLALSQYKI 561
+ L+ P EE G EG K+V+A H S + K ++
Sbjct: 163 VVLIFQPAEEGLSGAKMMREEGALKNVEAIFGIHLSPRTPFGKAASLAGSFMAGAGAFEA 222
Query: 562 SFFGKEAHAAGSPWMGINALDAAVLAYQSVSCL--RQQIHPDCRINGIF-IHGGVSTNVI 732
GK HAA P I+ + AA S+ L R+ D ++ + ++GG + NVI
Sbjct: 223 VITGKGGHAA-IPQHTIDPVVAASSIVLSLQHLVSRETDPSDSKVVTVTKVNGGNAFNVI 281
Query: 733 PNYTEMEYEIRAITSDELNRITPKVLACFHSAAQATGCQVNVTIK---SPPFENLISNKC 903
P+ + +RA T ++ ++ A C +V + + P ++N
Sbjct: 282 PDSITIGGTLRAFTG--FTQLQERIKEIITKQAAVHRCNASVNLAPNGNQPMPPTVNNMD 339
Query: 904 LIRLFEKM 927
L + F+K+
Sbjct: 340 LYKKFKKV 347
>sp|P58156|CBPX2_SULSO Thermostable carboxypeptidase 2
Length = 393
Score = 62.8 bits (151), Expect = 1e-09
Identities = 69/289 (23%), Positives = 114/289 (39%), Gaps = 34/289 (11%)
Frame = +1
Query: 70 NAIDKDAEELYALSNYLHCNPEISFNEYKAHDYICSYLEKKGFKVERHFKLETGFVAVYE 249
N + + + + + +H NPE+S+ EY + L K G +VE L T V
Sbjct: 9 NDVKEIEDWIIQIRRKIHENPELSYKEYSTSKLVAETLRKLGIEVEEGVGLPTAVVGKIR 68
Query: 250 TALQPHLVIL-VEMDALPI--------------IGHACGHNLIAECSVAAGIGLMQIMKT 384
V L +MDALP+ + HACGH+ ++ G + +
Sbjct: 69 GNKPGKTVALRADMDALPVEETSDVEFKSKVKGVMHACGHD--THVAMLLGGAYLLVKNK 126
Query: 385 YNLKGKLSLLGTPGEED--WGGKIKYVSEGFFKDVDAAVMCH-----PSIKNVVHKTHLA 543
+ G++ L+ P EED GG + G VD H PS K +
Sbjct: 127 DLISGEIRLIFQPAEEDGGLGGAKPMIEAGVMNGVDYVFGIHISSSYPSGVFATRKGPIM 186
Query: 544 LS--QYKISFFGKEAHAAGSPWMGINALDAAV-LAYQSVSCLRQQIHP--DCRINGIFIH 708
+ +KI GK H + +P I+ + ++ +A +QI P I+ IH
Sbjct: 187 ATPDAFKIVVHGKGGHGS-APHETIDPIFISLQIANAIYGITARQIDPVQPFVISITTIH 245
Query: 709 GGVSTNVIPNYTEMEYEIRAI-------TSDELNRITPKVLACFHSAAQ 834
G N+IP+ EM+ IR++ D + RI + + + +
Sbjct: 246 SGTKDNIIPDDAEMQGTIRSLDENVRSKAKDYMRRIVSSICGIYGATCE 294
>sp|P44765|ABGA_HAEIN Aminobenzoyl-glutamate utilization protein A homolog
Length = 423
Score = 62.4 bits (150), Expect = 2e-09
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 6/158 (3%)
Frame = +1
Query: 310 HACGHNLIAECSVAAGIGLMQIMKTYNLKGKLSLLGTPGEEDWGGKIKYVSEGFFKDVDA 489
HACGH+ + ++ G+ L L GK+ ++ P EE G G D D
Sbjct: 138 HACGHD--SHITIGLGVALWIAQNKDKLTGKVKIVFQPAEEGVRGAAAIAQSGIIDDADY 195
Query: 490 AVMCHPSI----KNVVHKTHLALSQYKIS--FFGKEAHAAGSPWMGINALDAAVLAYQSV 651
H S V+ LS KI + GK AHA +P +G NAL AA +
Sbjct: 196 FASSHISFCANTGTVIANPRNFLSTTKIDIRYKGKPAHAGAAPHLGRNALLAAAHTVTQL 255
Query: 652 SCLRQQIHPDCRINGIFIHGGVSTNVIPNYTEMEYEIR 765
+ + RIN + G NVIP+ E++ E+R
Sbjct: 256 HGIARHGKGMTRINVGVLKAGEGRNVIPSSAELQLEVR 293
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,046,541
Number of Sequences: 369166
Number of extensions: 2219614
Number of successful extensions: 5955
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5929
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9558791870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)