Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_D13
(875 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11141|HSP7F_CAEEL Heat shock 70 kDa protein F, mitochon... 491 e-138
sp|P38646|GRP75_HUMAN Stress-70 protein, mitochondrial prec... 490 e-138
sp|O35501|GRP75_CRIGR Stress-70 protein, mitochondrial prec... 488 e-138
sp|P38647|GRP75_MOUSE Stress-70 protein, mitochondrial prec... 488 e-138
sp|P48721|GRP75_RAT Stress-70 protein, mitochondrial precur... 487 e-137
sp|P29845|HSP7E_DROME Heat shock 70 kDa protein cognate 5 466 e-131
sp|Q98DD1|DNAK_RHILO Chaperone protein dnaK (Heat shock pro... 435 e-122
sp|P12398|HSP77_YEAST Heat shock protein SSC1, mitochondria... 435 e-122
sp|P39987|HSP7E_YEAST Heat shock protein SSC3, mitochondria... 431 e-120
sp|P42374|DNAK_RHIME Chaperone protein dnaK (Heat shock pro... 431 e-120
>sp|P11141|HSP7F_CAEEL Heat shock 70 kDa protein F, mitochondrial precursor
Length = 657
Score = 491 bits (1264), Expect = e-138
Identities = 245/292 (83%), Positives = 271/292 (92%), Gaps = 1/292 (0%)
Frame = +2
Query: 2 LGTTNSCVSVMDGKTPKVLENAEGARTTPSIVAFTGDGERLVGTPAKRQAVINSANTLHA 181
LGTTNSCVS+M+GKTPKV+ENAEG RTTPS VAFT DGERLVG PAKRQAV NSANTL A
Sbjct: 38 LGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVTNSANTLFA 97
Query: 182 TKRLIGRRFDEPEVQKDMKNVSYKIVRASNGDAWVEAQKKMYSPSQIGAFVLMKMKETAE 361
TKRLIGRR+++PEVQKD+K V YKIV+ASNGDAWVEAQ K+YSPSQ+GAFVLMKMKETAE
Sbjct: 98 TKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEAQGKVYSPSQVGAFVLMKMKETAE 157
Query: 362 NYLGTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDK-TDDK 538
+YLGT+V NAV+TVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDK DK
Sbjct: 158 SYLGTTVNNAVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKDAGDK 217
Query: 539 IIAVFDLGGGTFDVSVLEIQKGVFEVKSTSGDTFLGGEDFDNVLLQYIVSEFKKEQGVDI 718
IIAV+DLGGGTFDVS+LEIQKGVFEVKST+GDTFLGGEDFD+ L+ ++V EFKKEQGVD+
Sbjct: 218 IIAVYDLGGGTFDVSILEIQKGVFEVKSTNGDTFLGGEDFDHALVHHLVGEFKKEQGVDL 277
Query: 719 TKDPMAMQRVREAAEKAKIELSSAIQTDINLPYLTMDNTGPKHLSLKLTRSK 874
TKDP AMQR+REAAEKAK ELSS QTDINLPY+TMD +GPKHL+LKLTR+K
Sbjct: 278 TKDPQAMQRLREAAEKAKCELSSTTQTDINLPYITMDQSGPKHLNLKLTRAK 329
>sp|P38646|GRP75_HUMAN Stress-70 protein, mitochondrial precursor (75 kDa glucose
regulated protein) (GRP 75) (Peptide-binding protein 74)
(PBP74) (Mortalin) (MOT)
Length = 679
Score = 490 bits (1261), Expect = e-138
Identities = 242/291 (83%), Positives = 272/291 (93%)
Frame = +2
Query: 2 LGTTNSCVSVMDGKTPKVLENAEGARTTPSIVAFTGDGERLVGTPAKRQAVINSANTLHA 181
LGTTNSCV+VM+GK KVLENAEGARTTPS+VAFT DGERLVG PAKRQAV N NT +A
Sbjct: 60 LGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTADGERLVGMPAKRQAVTNPNNTFYA 119
Query: 182 TKRLIGRRFDEPEVQKDMKNVSYKIVRASNGDAWVEAQKKMYSPSQIGAFVLMKMKETAE 361
TKRLIGRR+D+PEVQKD+KNV +KIVRASNGDAWVEA K+YSPSQIGAFVLMKMKETAE
Sbjct: 120 TKRLIGRRYDDPEVQKDIKNVPFKIVRASNGDAWVEAHGKLYSPSQIGAFVLMKMKETAE 179
Query: 362 NYLGTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKTDDKI 541
NYLG + KNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDK++DK+
Sbjct: 180 NYLGHTAKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKSEDKV 239
Query: 542 IAVFDLGGGTFDVSVLEIQKGVFEVKSTSGDTFLGGEDFDNVLLQYIVSEFKKEQGVDIT 721
IAV+DLGGGTFD+S+LEIQKGVFEVKST+GDTFLGGEDFD LL++IV EFK+E GVD+T
Sbjct: 240 IAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLRHIVKEFKRETGVDLT 299
Query: 722 KDPMAMQRVREAAEKAKIELSSAIQTDINLPYLTMDNTGPKHLSLKLTRSK 874
KD MA+QRVREAAEKAK ELSS++QTDINLPYLTMD++GPKHL++KLTR++
Sbjct: 300 KDNMALQRVREAAEKAKCELSSSVQTDINLPYLTMDSSGPKHLNMKLTRAQ 350
>sp|O35501|GRP75_CRIGR Stress-70 protein, mitochondrial precursor (75 kDa glucose
regulated protein) (GRP 75)
Length = 679
Score = 488 bits (1257), Expect = e-138
Identities = 243/291 (83%), Positives = 270/291 (92%)
Frame = +2
Query: 2 LGTTNSCVSVMDGKTPKVLENAEGARTTPSIVAFTGDGERLVGTPAKRQAVINSANTLHA 181
LGTTNSCV+VM+GK KVLENAEGARTTPS+VAFT DGERLVG PAKRQAV N NT +A
Sbjct: 60 LGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTADGERLVGMPAKRQAVTNPNNTFYA 119
Query: 182 TKRLIGRRFDEPEVQKDMKNVSYKIVRASNGDAWVEAQKKMYSPSQIGAFVLMKMKETAE 361
TKRLIGRR+D+PEVQKD KNV +KIVRASNGDAWVEA K+YSPSQIGAFVLMKMKETAE
Sbjct: 120 TKRLIGRRYDDPEVQKDTKNVPFKIVRASNGDAWVEAHGKLYSPSQIGAFVLMKMKETAE 179
Query: 362 NYLGTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKTDDKI 541
NYLG + KNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDK++DKI
Sbjct: 180 NYLGHTAKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKSEDKI 239
Query: 542 IAVFDLGGGTFDVSVLEIQKGVFEVKSTSGDTFLGGEDFDNVLLQYIVSEFKKEQGVDIT 721
IAV+DLGGGTFD+S+LEIQKGVFEVKST+GDTFLGGEDFD LL++IV EFK+E GVD+T
Sbjct: 240 IAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLRHIVKEFKRETGVDLT 299
Query: 722 KDPMAMQRVREAAEKAKIELSSAIQTDINLPYLTMDNTGPKHLSLKLTRSK 874
KD MA+QRVREAAEKAK ELSS++QTDINLPYLTMD +GPKHL++KLTR++
Sbjct: 300 KDNMALQRVREAAEKAKCELSSSVQTDINLPYLTMDASGPKHLNMKLTRAQ 350
>sp|P38647|GRP75_MOUSE Stress-70 protein, mitochondrial precursor (75 kDa glucose
regulated protein) (GRP 75) (Peptide-binding protein 74)
(PBP74) (P66 MOT) (Mortalin)
Length = 679
Score = 488 bits (1256), Expect = e-138
Identities = 242/291 (83%), Positives = 270/291 (92%)
Frame = +2
Query: 2 LGTTNSCVSVMDGKTPKVLENAEGARTTPSIVAFTGDGERLVGTPAKRQAVINSANTLHA 181
LGTTNSCV+VM+GK KVLENAEGARTTPS+VAFT DGERLVG PAKRQAV N NT +A
Sbjct: 60 LGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTADGERLVGMPAKRQAVTNPNNTFYA 119
Query: 182 TKRLIGRRFDEPEVQKDMKNVSYKIVRASNGDAWVEAQKKMYSPSQIGAFVLMKMKETAE 361
TKRLIGRR+D+PEVQKD KNV +KIVRASNGDAWVEA K+YSPSQIGAFVLMKMKETAE
Sbjct: 120 TKRLIGRRYDDPEVQKDTKNVPFKIVRASNGDAWVEAHGKLYSPSQIGAFVLMKMKETAE 179
Query: 362 NYLGTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKTDDKI 541
NYLG + KNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDK++DK+
Sbjct: 180 NYLGHTAKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKSEDKV 239
Query: 542 IAVFDLGGGTFDVSVLEIQKGVFEVKSTSGDTFLGGEDFDNVLLQYIVSEFKKEQGVDIT 721
IAV+DLGGGTFD+S+LEIQKGVFEVKST+GDTFLGGEDFD LL++IV EFK+E GVD+T
Sbjct: 240 IAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLRHIVKEFKRETGVDLT 299
Query: 722 KDPMAMQRVREAAEKAKIELSSAIQTDINLPYLTMDNTGPKHLSLKLTRSK 874
KD MA+QRVREAAEKAK ELSS++QTDINLPYLTMD +GPKHL++KLTR++
Sbjct: 300 KDNMALQRVREAAEKAKCELSSSVQTDINLPYLTMDASGPKHLNMKLTRAQ 350
>sp|P48721|GRP75_RAT Stress-70 protein, mitochondrial precursor (75 kDa glucose
regulated protein) (GRP 75) (Peptide-binding protein 74)
(PBP74) (MTHSP70) (Mortalin)
Length = 679
Score = 487 bits (1254), Expect = e-137
Identities = 242/291 (83%), Positives = 270/291 (92%)
Frame = +2
Query: 2 LGTTNSCVSVMDGKTPKVLENAEGARTTPSIVAFTGDGERLVGTPAKRQAVINSANTLHA 181
LGTTNSCV+VM+GK KVLENAEGARTTPS+VAFT DGERLVG PAKRQAV N NT +A
Sbjct: 60 LGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTPDGERLVGMPAKRQAVTNPNNTFYA 119
Query: 182 TKRLIGRRFDEPEVQKDMKNVSYKIVRASNGDAWVEAQKKMYSPSQIGAFVLMKMKETAE 361
TKRLIGRR+D+PEVQKD KNV +KIVRASNGDAWVEA K+YSPSQIGAFVLMKMKETAE
Sbjct: 120 TKRLIGRRYDDPEVQKDTKNVPFKIVRASNGDAWVEAHGKLYSPSQIGAFVLMKMKETAE 179
Query: 362 NYLGTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKTDDKI 541
NYLG + KNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDK++DK+
Sbjct: 180 NYLGHTAKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKSEDKV 239
Query: 542 IAVFDLGGGTFDVSVLEIQKGVFEVKSTSGDTFLGGEDFDNVLLQYIVSEFKKEQGVDIT 721
IAV+DLGGGTFD+S+LEIQKGVFEVKST+GDTFLGGEDFD LL++IV EFK+E GVD+T
Sbjct: 240 IAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLRHIVKEFKRETGVDLT 299
Query: 722 KDPMAMQRVREAAEKAKIELSSAIQTDINLPYLTMDNTGPKHLSLKLTRSK 874
KD MA+QRVREAAEKAK ELSS++QTDINLPYLTMD +GPKHL++KLTR++
Sbjct: 300 KDNMALQRVREAAEKAKCELSSSVQTDINLPYLTMDASGPKHLNMKLTRAQ 350
>sp|P29845|HSP7E_DROME Heat shock 70 kDa protein cognate 5
Length = 686
Score = 466 bits (1199), Expect = e-131
Identities = 231/292 (79%), Positives = 267/292 (91%), Gaps = 1/292 (0%)
Frame = +2
Query: 2 LGTTNSCVSVMDGKTPKVLENAEGARTTPSIVAFTGDGERLVGTPAKRQAVINSANTLHA 181
LGTTNSC++VM+GK KV+ENAEGARTTPS VAFT DGERLVG PAKRQAV NSANT +A
Sbjct: 59 LGTTNSCLAVMEGKQAKVIENAEGARTTPSHVAFTKDGERLVGMPAKRQAVTNSANTFYA 118
Query: 182 TKRLIGRRFDEPEVQKDMKNVSYKIVRASNGDAWVEAQK-KMYSPSQIGAFVLMKMKETA 358
TKRLIGRRFD+PEV+KD+ N+SYK+V+ASNGDAWV + K+YSPSQIGAF+LMKMKETA
Sbjct: 119 TKRLIGRRFDDPEVKKDITNLSYKVVKASNGDAWVSSTDGKVYSPSQIGAFILMKMKETA 178
Query: 359 ENYLGTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKTDDK 538
E YL T VKNAV+TVPAYFNDSQRQATKDAGQI+GLNVLRVINEPTAAALAYG+DKT+DK
Sbjct: 179 EAYLNTPVKNAVVTVPAYFNDSQRQATKDAGQIAGLNVLRVINEPTAAALAYGMDKTEDK 238
Query: 539 IIAVFDLGGGTFDVSVLEIQKGVFEVKSTSGDTFLGGEDFDNVLLQYIVSEFKKEQGVDI 718
IIAV+DLGGGTFD+S+LEIQKGVFEVKST+GDT LGGEDFDN ++ ++V+EFKK+ G+DI
Sbjct: 239 IIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTLLGGEDFDNHIVNFLVAEFKKDSGIDI 298
Query: 719 TKDPMAMQRVREAAEKAKIELSSAIQTDINLPYLTMDNTGPKHLSLKLTRSK 874
KD +AMQR++EAAEKAK ELSS+ QTDINLPYLTMD GP+H++LKLTRSK
Sbjct: 299 RKDNIAMQRLKEAAEKAKCELSSSQQTDINLPYLTMDAAGPQHMNLKLTRSK 350
>sp|Q98DD1|DNAK_RHILO Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa
protein) (HSP70)
Length = 638
Score = 435 bits (1119), Expect = e-122
Identities = 215/291 (73%), Positives = 249/291 (85%)
Frame = +2
Query: 2 LGTTNSCVSVMDGKTPKVLENAEGARTTPSIVAFTGDGERLVGTPAKRQAVINSANTLHA 181
LGTTNSC+++MDGK PKV+ENAEGARTTPSIVA +GDGERLVG PAKRQAV N NT+ A
Sbjct: 9 LGTTNSCIAIMDGKEPKVIENAEGARTTPSIVAISGDGERLVGQPAKRQAVTNPENTIFA 68
Query: 182 TKRLIGRRFDEPEVQKDMKNVSYKIVRASNGDAWVEAQKKMYSPSQIGAFVLMKMKETAE 361
KRLIGRR+D+P +KD K V YKIV+ NGDAWVEA K SPSQI A +L KMKETAE
Sbjct: 69 VKRLIGRRYDDPVTEKDKKLVPYKIVKGDNGDAWVEAGGKKQSPSQISAMILQKMKETAE 128
Query: 362 NYLGTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKTDDKI 541
YLG V+ AVITVPAYFND+QRQATKDAG+I+GL VLR+INEPTAAALAYGLDK D K
Sbjct: 129 AYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKDGKT 188
Query: 542 IAVFDLGGGTFDVSVLEIQKGVFEVKSTSGDTFLGGEDFDNVLLQYIVSEFKKEQGVDIT 721
IAV+DLGGGTFD+SVLEI GVFEVKST+GDTFLGGEDFD L++Y+ +EFKKEQG+D+
Sbjct: 189 IAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLAAEFKKEQGIDLK 248
Query: 722 KDPMAMQRVREAAEKAKIELSSAIQTDINLPYLTMDNTGPKHLSLKLTRSK 874
D +A+QR++EAAEKAKIELSS QT+INLP++T D TGPKHL+LKLTR+K
Sbjct: 249 NDKLALQRLKEAAEKAKIELSSTTQTEINLPFITADATGPKHLTLKLTRAK 299
>sp|P12398|HSP77_YEAST Heat shock protein SSC1, mitochondrial precursor (Endonuclease SCEI
75 kDa subunit)
Length = 654
Score = 435 bits (1118), Expect = e-122
Identities = 211/291 (72%), Positives = 254/291 (87%)
Frame = +2
Query: 2 LGTTNSCVSVMDGKTPKVLENAEGARTTPSIVAFTGDGERLVGTPAKRQAVINSANTLHA 181
LGTTNS V++M+GK PK++ENAEG+RTTPS+VAFT +GERLVG PAKRQAV+N NTL A
Sbjct: 37 LGTTNSAVAIMEGKVPKIIENAEGSRTTPSVVAFTKEGERLVGIPAKRQAVVNPENTLFA 96
Query: 182 TKRLIGRRFDEPEVQKDMKNVSYKIVRASNGDAWVEAQKKMYSPSQIGAFVLMKMKETAE 361
TKRLIGRRF++ EVQ+D+K V YKIV+ SNGDAWVEA+ + YSP+QIG FVL KMKETAE
Sbjct: 97 TKRLIGRRFEDAEVQRDIKQVPYKIVKHSNGDAWVEARGQTYSPAQIGGFVLNKMKETAE 156
Query: 362 NYLGTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKTDDKI 541
YLG VKNAV+TVPAYFNDSQRQATKDAGQI GLNVLRV+NEPTAAALAYGL+K+D K+
Sbjct: 157 AYLGKPVKNAVVTVPAYFNDSQRQATKDAGQIVGLNVLRVVNEPTAAALAYGLEKSDSKV 216
Query: 542 IAVFDLGGGTFDVSVLEIQKGVFEVKSTSGDTFLGGEDFDNVLLQYIVSEFKKEQGVDIT 721
+AVFDLGGGTFD+S+L+I GVFEVKST+GDT LGGEDFD LL+ IVS FK E G+D+
Sbjct: 217 VAVFDLGGGTFDISILDIDNGVFEVKSTNGDTHLGGEDFDIYLLREIVSRFKTETGIDLE 276
Query: 722 KDPMAMQRVREAAEKAKIELSSAIQTDINLPYLTMDNTGPKHLSLKLTRSK 874
D MA+QR+REAAEKAKIELSS + T+INLP++T D +GPKH+++K +R++
Sbjct: 277 NDRMAIQRIREAAEKAKIELSSTVSTEINLPFITADASGPKHINMKFSRAQ 327
>sp|P39987|HSP7E_YEAST Heat shock protein SSC3, mitochondrial precursor (Extracellular
matrix protein 10)
Length = 644
Score = 431 bits (1109), Expect = e-120
Identities = 208/289 (71%), Positives = 251/289 (86%)
Frame = +2
Query: 2 LGTTNSCVSVMDGKTPKVLENAEGARTTPSIVAFTGDGERLVGTPAKRQAVINSANTLHA 181
LGTTNS V++M+GK P+++ENAEG+RTTPS+VAFT DGERLVG PAKRQ+VINS NTL A
Sbjct: 34 LGTTNSAVAIMEGKVPRIIENAEGSRTTPSVVAFTKDGERLVGEPAKRQSVINSENTLFA 93
Query: 182 TKRLIGRRFDEPEVQKDMKNVSYKIVRASNGDAWVEAQKKMYSPSQIGAFVLMKMKETAE 361
TKRLIGRRF++ EVQ+D+ V +KIV+ SNGDAWVEA+ + YSP+QIG F+L KMKETAE
Sbjct: 94 TKRLIGRRFEDAEVQRDINQVPFKIVKHSNGDAWVEARNRTYSPAQIGGFILNKMKETAE 153
Query: 362 NYLGTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKTDDKI 541
YL SVKNAV+TVPAYFND+QRQATKDAGQI GLNVLRV+NEPTAAALAYGLDK++ K+
Sbjct: 154 AYLAKSVKNAVVTVPAYFNDAQRQATKDAGQIIGLNVLRVVNEPTAAALAYGLDKSEPKV 213
Query: 542 IAVFDLGGGTFDVSVLEIQKGVFEVKSTSGDTFLGGEDFDNVLLQYIVSEFKKEQGVDIT 721
IAVFDLGGGTFD+S+L+I G+FEVKST+GDT LGGEDFD LLQ I+S FKKE G+D++
Sbjct: 214 IAVFDLGGGTFDISILDIDNGIFEVKSTNGDTHLGGEDFDIYLLQEIISHFKKETGIDLS 273
Query: 722 KDPMAMQRVREAAEKAKIELSSAIQTDINLPYLTMDNTGPKHLSLKLTR 868
D MA+QR+REAAEKAKIELSS + T+INLP++T D GPKH+ + +R
Sbjct: 274 NDRMAVQRIREAAEKAKIELSSTLSTEINLPFITADAAGPKHIRMPFSR 322
>sp|P42374|DNAK_RHIME Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa
protein) (HSP70)
Length = 641
Score = 431 bits (1107), Expect = e-120
Identities = 215/291 (73%), Positives = 250/291 (85%)
Frame = +2
Query: 2 LGTTNSCVSVMDGKTPKVLENAEGARTTPSIVAFTGDGERLVGTPAKRQAVINSANTLHA 181
LGTTNSCVSVMDGK KV+ENAEGARTTPS+VAFT DGERLVG PAKRQAV N NTL A
Sbjct: 9 LGTTNSCVSVMDGKDAKVIENAEGARTTPSMVAFTEDGERLVGQPAKRQAVTNPENTLFA 68
Query: 182 TKRLIGRRFDEPEVQKDMKNVSYKIVRASNGDAWVEAQKKMYSPSQIGAFVLMKMKETAE 361
KRLIGR F++P QKD V YKIV+A NGDAWVEA YSPSQI A +L KMKETAE
Sbjct: 69 IKRLIGRTFEDPTTQKDKGMVPYKIVKADNGDAWVEAHGTSYSPSQISAMILQKMKETAE 128
Query: 362 NYLGTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKTDDKI 541
+YLG V+ AVITVPAYFND+QRQATKDAG+I+GL+VLR+INEPTAAALAYGLDK + K
Sbjct: 129 SYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLDVLRIINEPTAAALAYGLDKKEGKT 188
Query: 542 IAVFDLGGGTFDVSVLEIQKGVFEVKSTSGDTFLGGEDFDNVLLQYIVSEFKKEQGVDIT 721
IAV+DLGGGTFD+SVLEI GVFEVKST+GDTFLGGEDFD L++Y+ SEFKKEQG+D+
Sbjct: 189 IAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLASEFKKEQGIDLK 248
Query: 722 KDPMAMQRVREAAEKAKIELSSAIQTDINLPYLTMDNTGPKHLSLKLTRSK 874
D +A+QR++EAAEKAKIELSS+ QT+INLP++T D +GPKHL++KL+R+K
Sbjct: 249 NDKLALQRLKEAAEKAKIELSSSQQTEINLPFITADASGPKHLTMKLSRAK 299
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,700,460
Number of Sequences: 369166
Number of extensions: 1805999
Number of successful extensions: 6747
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5789
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8694177530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)