Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_B19
(322 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cy... 167 5e-42
sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cy... 167 5e-42
sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cy... 166 2e-41
sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cyto... 163 1e-40
sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cy... 163 1e-40
sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cy... 161 5e-40
sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP... 157 9e-39
sp|P29190|PPCK_HAECO Phosphoenolpyruvate carboxykinase [GTP... 153 1e-37
sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mi... 150 9e-37
sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mi... 148 3e-36
>sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 167 bits (424), Expect = 5e-42
Identities = 79/107 (73%), Positives = 91/107 (85%)
Frame = +2
Query: 2 FSMGPVGGPLSKIGIEITDSPYVVASMRIMTRMGTQVLKVLGHSDDFVRAIHSMGVPLPT 181
FSMGP+G PLSKIGIE+TDSPYVVASMRIMTRMGT VL+ LG + FV+ +HS+G PLP
Sbjct: 144 FSMGPLGSPLSKIGIELTDSPYVVASMRIMTRMGTPVLEALGDGE-FVKCLHSVGCPLPL 202
Query: 182 TKKIINGWPCDPERTIIAHLPERNEICSFGSGYGGNSLLGKKCLALR 322
K ++N WPC+PE T+IAHLP+R EI SFGSGYGGNSLLGKKC ALR
Sbjct: 203 QKPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALR 249
>sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 167 bits (424), Expect = 5e-42
Identities = 79/107 (73%), Positives = 91/107 (85%)
Frame = +2
Query: 2 FSMGPVGGPLSKIGIEITDSPYVVASMRIMTRMGTQVLKVLGHSDDFVRAIHSMGVPLPT 181
FSMGP+G PLSKIGIE+TDSPYVVASMRIMTRMGT VL+ LG + FV+ +HS+G PLP
Sbjct: 144 FSMGPLGSPLSKIGIELTDSPYVVASMRIMTRMGTPVLEALGDGE-FVKCLHSVGCPLPL 202
Query: 182 TKKIINGWPCDPERTIIAHLPERNEICSFGSGYGGNSLLGKKCLALR 322
K ++N WPC+PE T+IAHLP+R EI SFGSGYGGNSLLGKKC ALR
Sbjct: 203 QKPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALR 249
>sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 166 bits (419), Expect = 2e-41
Identities = 77/107 (71%), Positives = 91/107 (85%)
Frame = +2
Query: 2 FSMGPVGGPLSKIGIEITDSPYVVASMRIMTRMGTQVLKVLGHSDDFVRAIHSMGVPLPT 181
FSMGP+G PL+KIGIE+TDSPYVVASMR+MTRMGT LK LG+ + FV+ +HS+G PLP
Sbjct: 144 FSMGPIGSPLAKIGIELTDSPYVVASMRMMTRMGTAALKALGNGE-FVKCLHSVGCPLPL 202
Query: 182 TKKIINGWPCDPERTIIAHLPERNEICSFGSGYGGNSLLGKKCLALR 322
+ +IN WPC+PE T+IAHLP+R EI SFGSGYGGNSLLGKKC ALR
Sbjct: 203 KEPLINNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALR 249
>sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 163 bits (413), Expect = 1e-40
Identities = 76/107 (71%), Positives = 90/107 (84%)
Frame = +2
Query: 2 FSMGPVGGPLSKIGIEITDSPYVVASMRIMTRMGTQVLKVLGHSDDFVRAIHSMGVPLPT 181
FSMGP+G PL+KIGIE+TDSPYVVASMRIMTRMGT VL+ LG + F++ +HS+G PLP
Sbjct: 144 FSMGPLGSPLAKIGIELTDSPYVVASMRIMTRMGTSVLEALGDGE-FIKCLHSVGCPLPL 202
Query: 182 TKKIINGWPCDPERTIIAHLPERNEICSFGSGYGGNSLLGKKCLALR 322
K ++N W C+PE T+IAHLP+R EI SFGSGYGGNSLLGKKC ALR
Sbjct: 203 KKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALR 249
>sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 163 bits (413), Expect = 1e-40
Identities = 77/107 (71%), Positives = 89/107 (83%)
Frame = +2
Query: 2 FSMGPVGGPLSKIGIEITDSPYVVASMRIMTRMGTQVLKVLGHSDDFVRAIHSMGVPLPT 181
FSMGP+G PLSKIGIE+TDSPYVV SMRIMTRMGT VL+ LG + FV+ +HS+G PLP
Sbjct: 144 FSMGPLGSPLSKIGIELTDSPYVVTSMRIMTRMGTSVLEALGDGE-FVKCLHSVGCPLPL 202
Query: 182 TKKIINGWPCDPERTIIAHLPERNEICSFGSGYGGNSLLGKKCLALR 322
K ++N W C+PE T+IAHLP+R EI SFGSGYGGNSLLGKKC ALR
Sbjct: 203 KKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALR 249
>sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 161 bits (407), Expect = 5e-40
Identities = 75/107 (70%), Positives = 89/107 (83%)
Frame = +2
Query: 2 FSMGPVGGPLSKIGIEITDSPYVVASMRIMTRMGTQVLKVLGHSDDFVRAIHSMGVPLPT 181
FSMGP+G PL+KIGIE+TDSPYVVASMRIMTRMG VL+ LG + F++ +HS+G PLP
Sbjct: 144 FSMGPLGSPLAKIGIELTDSPYVVASMRIMTRMGISVLEALGDGE-FIKCLHSVGCPLPL 202
Query: 182 TKKIINGWPCDPERTIIAHLPERNEICSFGSGYGGNSLLGKKCLALR 322
K ++N W C+PE T+IAHLP+R EI SFGSGYGGNSLLGKKC ALR
Sbjct: 203 KKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALR 249
>sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 643
Score = 157 bits (396), Expect = 9e-39
Identities = 76/108 (70%), Positives = 86/108 (79%), Gaps = 1/108 (0%)
Frame = +2
Query: 2 FSMGPVGGPLSKIGIEITDSPYVVASMRIMTRMGTQVLKVLGHSD-DFVRAIHSMGVPLP 178
+SMGPVGGPLSKIGIE+TDS YVV MRIMTRMG VLK L ++ +FVR +HS+G P P
Sbjct: 160 YSMGPVGGPLSKIGIELTDSDYVVLCMRIMTRMGEPVLKALAKNNGEFVRCVHSVGQPKP 219
Query: 179 TTKKIINGWPCDPERTIIAHLPERNEICSFGSGYGGNSLLGKKCLALR 322
K+IN WPC+PE+TIIAH P EI SFGSGYGGNSLLGKKC ALR
Sbjct: 220 VATKVINHWPCNPEKTIIAHRPAEREIWSFGSGYGGNSLLGKKCFALR 267
>sp|P29190|PPCK_HAECO Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 619
Score = 153 bits (387), Expect = 1e-37
Identities = 74/107 (69%), Positives = 87/107 (81%)
Frame = +2
Query: 2 FSMGPVGGPLSKIGIEITDSPYVVASMRIMTRMGTQVLKVLGHSDDFVRAIHSMGVPLPT 181
FSMGPVGGPLSKIG+++TDS YVV SMRIMTR+G +V LG +DFVR IHS+G+P P
Sbjct: 139 FSMGPVGGPLSKIGVQLTDSNYVVLSMRIMTRVGHEVWDALG-DNDFVRCIHSVGLPRPV 197
Query: 182 TKKIINGWPCDPERTIIAHLPERNEICSFGSGYGGNSLLGKKCLALR 322
+++IN WPC+PER +IAH P EI SFGSGYGGNSLLGKK LALR
Sbjct: 198 KQRVINHWPCNPERVLIAHRPAEREIWSFGSGYGGNSLLGKKMLALR 244
>sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 150 bits (379), Expect = 9e-37
Identities = 70/107 (65%), Positives = 88/107 (82%)
Frame = +2
Query: 2 FSMGPVGGPLSKIGIEITDSPYVVASMRIMTRMGTQVLKVLGHSDDFVRAIHSMGVPLPT 181
FSMGPVG PLS+IG+++TDS YVVASMRIMTR+GT VL+ LG D FV+ +HS+G PL
Sbjct: 162 FSMGPVGSPLSRIGVQLTDSAYVVASMRIMTRLGTPVLQALGDGD-FVKCLHSVGQPLTG 220
Query: 182 TKKIINGWPCDPERTIIAHLPERNEICSFGSGYGGNSLLGKKCLALR 322
+ ++ WPC+PE+T+I H+P++ EI SFGSGYGGNSLLGKKC ALR
Sbjct: 221 QGEPVSQWPCNPEKTLIGHVPDQREIISFGSGYGGNSLLGKKCFALR 267
>sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 148 bits (374), Expect = 3e-36
Identities = 69/107 (64%), Positives = 86/107 (80%)
Frame = +2
Query: 2 FSMGPVGGPLSKIGIEITDSPYVVASMRIMTRMGTQVLKVLGHSDDFVRAIHSMGVPLPT 181
FSMGPVG PLS+IG+++TDS YVVASMRIMTR+GT VL+ LG D F++ +HS+G PL
Sbjct: 162 FSMGPVGSPLSRIGVQLTDSAYVVASMRIMTRLGTPVLQALGDGD-FIKCLHSVGQPLTG 220
Query: 182 TKKIINGWPCDPERTIIAHLPERNEICSFGSGYGGNSLLGKKCLALR 322
+ WPC+PE+T+I H+P++ EI SFGSGYGGNSLLGKKC ALR
Sbjct: 221 HGDPVGQWPCNPEKTLIGHVPDQREIVSFGSGYGGNSLLGKKCFALR 267
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,366,472
Number of Sequences: 369166
Number of extensions: 810157
Number of successful extensions: 1826
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1779
length of database: 68,354,980
effective HSP length: 75
effective length of database: 54,499,855
effective search space used: 1689495505
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)