Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_B15
(573 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P17663|FRIH1_XENLA Ferritin heavy chain 1 64 3e-10
sp|P49948|FRIH2_XENLA Ferritin heavy chain 2 (XL2-17) 63 5e-10
sp|Q7SXA5|FRIL_XENLA Ferritin light chain, oocyte isoform (... 63 6e-10
sp|P49947|FRIM_SALSA Ferritin, middle subunit (Ferritin M) 63 6e-10
sp|P42577|FRIS_LYMST Soma ferritin 62 1e-09
sp|P07798|FRI2_RANCA Ferritin, middle subunit (Ferritin M) ... 62 1e-09
sp|P25915|FRIH_RABIT Ferritin heavy chain (Ferritin H subunit) 61 2e-09
sp|P08267|FRIH_CHICK Ferritin heavy chain (Ferritin H subunit) 60 3e-09
sp|P07229|FRI1_RANCA Ferritin, higher subunit (Ferritin H) 60 5e-09
sp|Q5R8J7|FRIH_PONPY Ferritin heavy chain (Ferritin H subunit) 60 5e-09
>sp|P17663|FRIH1_XENLA Ferritin heavy chain 1
Length = 176
Score = 63.9 bits (154), Expect = 3e-10
Identities = 37/114 (32%), Positives = 57/114 (50%)
Frame = +2
Query: 2 VNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKVTWYDVKPVEHIETPKPFEMFQTILN 181
V L + F+ E + E+ +++Q RG +V D+K E E E Q L
Sbjct: 43 VALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRVVLQDIKKPERDEWSNTLEAMQAALQ 102
Query: 182 LEKDVHQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRRSG 343
LEK V+Q L L KLA +K+D L FL+ + Q+K +++ + NL+R G
Sbjct: 103 LEKTVNQALLDLHKLASDKVDPQLCDFLESEYLEEQVKAMKELGDYITNLKRLG 156
>sp|P49948|FRIH2_XENLA Ferritin heavy chain 2 (XL2-17)
Length = 176
Score = 63.2 bits (152), Expect = 5e-10
Identities = 37/114 (32%), Positives = 57/114 (50%)
Frame = +2
Query: 2 VNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKVTWYDVKPVEHIETPKPFEMFQTILN 181
V L + F+ E + E+ +++Q RG +V D+K E E E Q L
Sbjct: 43 VALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRVVLQDIKKPERDEWGNTLEATQAALQ 102
Query: 182 LEKDVHQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRRSG 343
LEK V+Q L L KLA +K+D L FL+ + Q+K +++ + NL+R G
Sbjct: 103 LEKTVNQALLDLHKLASDKVDAHLCDFLESEYLEEQVKAMKQLGDYITNLKRLG 156
>sp|Q7SXA5|FRIL_XENLA Ferritin light chain, oocyte isoform (B-ferritin) (XeBF) (GV-LCH)
Length = 177
Score = 62.8 bits (151), Expect = 6e-10
Identities = 34/112 (30%), Positives = 58/112 (51%)
Frame = +2
Query: 2 VNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKVTWYDVKPVEHIETPKPFEMFQTILN 181
V L F + F + + + + E+ ++FQ RG +V DVK + E + + LN
Sbjct: 45 VALSKFSKFFRELSEKKRDHAEDFLKFQNKRGGRVVLQDVKKPDDDEWGNGTKAMEVALN 104
Query: 182 LEKDVHQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRR 337
LEK ++Q L L K+A + D + +L+ + ++K+I+K L NLRR
Sbjct: 105 LEKSINQAVLDLHKIATDHTDPHMQDYLEHEFLEEEVKLIKKLGDHLTNLRR 156
>sp|P49947|FRIM_SALSA Ferritin, middle subunit (Ferritin M)
Length = 176
Score = 62.8 bits (151), Expect = 6e-10
Identities = 40/131 (30%), Positives = 64/131 (48%)
Frame = +2
Query: 2 VNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKVTWYDVKPVEHIETPKPFEMFQTILN 181
V L F F+ + E + ++L+ FQ RG ++ D+K E E E Q L
Sbjct: 43 VALPGFAHFFKENSEEEREHADKLLSFQNKRGGRILLQDIKKPERDEWGNGLEAMQCALQ 102
Query: 182 LEKDVHQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRRSGDDVTPF 361
LEK+V+Q L L K+A +K+D L FL+ + Q++ I+K + NL + D V
Sbjct: 103 LEKNVNQALLDLHKIASDKVDPHLCDFLETHYLNEQVEAIKKLGDHITNLTKM-DAVKNK 161
Query: 362 LTSSLHARHEI 394
+ L +H +
Sbjct: 162 MAEYLFDKHTL 172
>sp|P42577|FRIS_LYMST Soma ferritin
Length = 174
Score = 62.0 bits (149), Expect = 1e-09
Identities = 35/121 (28%), Positives = 61/121 (50%)
Frame = +2
Query: 2 VNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKVTWYDVKPVEHIETPKPFEMFQTILN 181
V L F + F+ + E + E+L+++Q RG ++ D+K + E E Q L
Sbjct: 44 VALPGFHKFFKHQSEEEREHAEKLMKYQNKRGGRIVLQDIKKPDRDEWGTGLEAMQVALQ 103
Query: 182 LEKDVHQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRRSGDDVTPF 361
LEK V+Q+ L L KL D + FL+ + Q+K I++ + + NL+R G + +
Sbjct: 104 LEKSVNQSLLDLHKLCTSHDDAQMADFLESEFLEEQVKSIKELSDYITNLKRVGPGLGEY 163
Query: 362 L 364
+
Sbjct: 164 I 164
>sp|P07798|FRI2_RANCA Ferritin, middle subunit (Ferritin M) (Ferritin X) (Ferritin H')
Length = 176
Score = 62.0 bits (149), Expect = 1e-09
Identities = 38/114 (33%), Positives = 57/114 (50%)
Frame = +2
Query: 2 VNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKVTWYDVKPVEHIETPKPFEMFQTILN 181
V L + F+ E + E+ +++Q RG +V D+K E E E Q L
Sbjct: 43 VALHNVAEFFKEHSHEEREHAEKFMKYQNKRGGRVVLQDIKKPERDEWGNTLEAMQAALQ 102
Query: 182 LEKDVHQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRRSG 343
LEK V+Q L L KLA +K+D L FL+ + Q+K I++ + NL+R G
Sbjct: 103 LEKTVNQALLDLHKLATDKVDPHLCDFLESEYLEEQVKDIKRIGDFITNLKRLG 156
>sp|P25915|FRIH_RABIT Ferritin heavy chain (Ferritin H subunit)
Length = 164
Score = 60.8 bits (146), Expect = 2e-09
Identities = 35/114 (30%), Positives = 59/114 (51%)
Frame = +2
Query: 2 VNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKVTWYDVKPVEHIETPKPFEMFQTILN 181
V L +F + F E + E+L++ Q RG ++ D+K E+ + + L+
Sbjct: 28 VALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKPEYDDWESGLNAMECALH 87
Query: 182 LEKDVHQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRRSG 343
LEK V+Q+ L L KLA +K D L F++ + Q+K I++ + NLR+ G
Sbjct: 88 LEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMG 141
>sp|P08267|FRIH_CHICK Ferritin heavy chain (Ferritin H subunit)
Length = 180
Score = 60.5 bits (145), Expect = 3e-09
Identities = 35/114 (30%), Positives = 59/114 (51%)
Frame = +2
Query: 2 VNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKVTWYDVKPVEHIETPKPFEMFQTILN 181
V L +F + F E + E+L++ Q RG ++ D+K + + + L+
Sbjct: 46 VALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKPDRDDWENGLTAMECALH 105
Query: 182 LEKDVHQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRRSG 343
LEK+V+Q+ L L KLA EK D L F++ + Q+K I++ + NLR+ G
Sbjct: 106 LEKNVNQSLLELHKLATEKNDPHLCDFIETHYLDEQVKAIKQLGDHVTNLRKMG 159
>sp|P07229|FRI1_RANCA Ferritin, higher subunit (Ferritin H)
Length = 176
Score = 59.7 bits (143), Expect = 5e-09
Identities = 36/114 (31%), Positives = 57/114 (50%)
Frame = +2
Query: 2 VNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKVTWYDVKPVEHIETPKPFEMFQTILN 181
+ L + + F+ E + E+L++ Q RG ++ DVK E E E Q L
Sbjct: 43 IALHNVAKFFKEQSHEEREHAEKLMKDQNKRGGRIVLQDVKKPERDEWGNTLEAMQAALQ 102
Query: 182 LEKDVHQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRRSG 343
LEK V+Q L L K+ +K+D L FL+ + Q+K I++ + NL+R G
Sbjct: 103 LEKTVNQALLDLHKVGSDKVDPHLCDFLETEYLEEQVKSIKQLGDYITNLKRLG 156
>sp|Q5R8J7|FRIH_PONPY Ferritin heavy chain (Ferritin H subunit)
Length = 183
Score = 59.7 bits (143), Expect = 5e-09
Identities = 35/114 (30%), Positives = 59/114 (51%)
Frame = +2
Query: 2 VNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKVTWYDVKPVEHIETPKPFEMFQTILN 181
V L +F + F E + E+L++ Q RG ++ D+K + + + L+
Sbjct: 47 VALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKPDCDDWESGLNAMECALH 106
Query: 182 LEKDVHQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRRSG 343
LEK+V+Q+ L L KLA +K D L FL+ + Q+K I++ + NLR+ G
Sbjct: 107 LEKNVNQSLLELHKLATDKNDPHLCDFLETHYLNEQVKAIKELGDHVTNLRKMG 160
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,731,733
Number of Sequences: 369166
Number of extensions: 993128
Number of successful extensions: 2507
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2507
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 4226258440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)