Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_A21
(843 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A 398 e-111
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 397 e-110
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 397 e-110
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 395 e-110
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 395 e-110
sp|Q24789|HSP70_ECHGR Heat shock cognate 70 kDa protein (HS... 395 e-110
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 394 e-109
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 394 e-109
sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (... 391 e-108
sp|P08106|HSP70_CHICK Heat shock 70 kDa protein (HSP70) 390 e-108
>sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A
Length = 640
Score = 398 bits (1023), Expect = e-111
Identities = 204/281 (72%), Positives = 223/281 (79%)
Frame = +1
Query: 1 AKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGD 180
AK+DK+ +H+IVLVGGSTRIPK+QKLL DLF+GKELNKSINPDE ILSGD
Sbjct: 325 AKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGD 384
Query: 181 KSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFSTYSDNQPGVLIQVF 360
KSEAVQD GIETAGGVMTALIKRNTTIPTK Q F+TYSDNQPGVLIQV+
Sbjct: 385 KSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVY 444
Query: 361 EGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATEKGTGKENKITI 540
EGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAT+K TGK+NKITI
Sbjct: 445 EGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQNKITI 504
Query: 541 TNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQMKSTIEDEKLKDKIS 720
TNDKGRLSKDDIERMVN RIGAKN LESYA+ +K TIEDEKLKDKIS
Sbjct: 505 TNDKGRLSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKIS 564
Query: 721 ESDRKQIVDRCQEAISWLEKNQQATKEEFDYHYKDLEKLCN 843
D+K+I D+C E + WL+ NQ A KEEF++ KDLE L N
Sbjct: 565 PEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLAN 605
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 397 bits (1019), Expect = e-110
Identities = 200/281 (71%), Positives = 226/281 (80%)
Frame = +1
Query: 1 AKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGD 180
AKLDK+ IH+IVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGD
Sbjct: 324 AKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
Query: 181 KSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFSTYSDNQPGVLIQVF 360
KSE VQD GIETAGGVMT LIKRNTTIPTKQTQ F+TYSDNQPGVLIQV+
Sbjct: 384 KSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVY 443
Query: 361 EGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATEKGTGKENKITI 540
EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K TGKENKITI
Sbjct: 444 EGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITI 503
Query: 541 TNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQMKSTIEDEKLKDKIS 720
TNDKGRLSK+DIERMV ++ +KN LESYA+ MK+T+EDEKL+ KI+
Sbjct: 504 TNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKIN 563
Query: 721 ESDRKQIVDRCQEAISWLEKNQQATKEEFDYHYKDLEKLCN 843
+ D+++I+D+C E ISWL+KNQ A KEEF++ K+LEK+CN
Sbjct: 564 DEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCN 604
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 397 bits (1019), Expect = e-110
Identities = 200/281 (71%), Positives = 226/281 (80%)
Frame = +1
Query: 1 AKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGD 180
AKLDK+ IH+IVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGD
Sbjct: 324 AKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
Query: 181 KSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFSTYSDNQPGVLIQVF 360
KSE VQD GIETAGGVMT LIKRNTTIPTKQTQ F+TYSDNQPGVLIQV+
Sbjct: 384 KSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVY 443
Query: 361 EGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATEKGTGKENKITI 540
EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K TGKENKITI
Sbjct: 444 EGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITI 503
Query: 541 TNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQMKSTIEDEKLKDKIS 720
TNDKGRLSK+DIERMV ++ +KN LESYA+ MK+T+EDEKL+ KI+
Sbjct: 504 TNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKIN 563
Query: 721 ESDRKQIVDRCQEAISWLEKNQQATKEEFDYHYKDLEKLCN 843
+ D+++I+D+C E ISWL+KNQ A KEEF++ K+LEK+CN
Sbjct: 564 DEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCN 604
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 395 bits (1016), Expect = e-110
Identities = 199/281 (70%), Positives = 226/281 (80%)
Frame = +1
Query: 1 AKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGD 180
AKLDK+ IH+IVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGD
Sbjct: 324 AKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
Query: 181 KSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFSTYSDNQPGVLIQVF 360
KSE VQD GIETAGGVMT LIKRNTTIPTKQTQ F+TYSDNQPGVLIQV+
Sbjct: 384 KSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVY 443
Query: 361 EGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATEKGTGKENKITI 540
EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K TGKENKITI
Sbjct: 444 EGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITI 503
Query: 541 TNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQMKSTIEDEKLKDKIS 720
TNDKGRLSK+DIERMV ++ +KN LESYA+ MK+T+EDEKL+ KI+
Sbjct: 504 TNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKIN 563
Query: 721 ESDRKQIVDRCQEAISWLEKNQQATKEEFDYHYKDLEKLCN 843
+ D+++I+D+C E I+WL+KNQ A KEEF++ K+LEK+CN
Sbjct: 564 DEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCN 604
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 395 bits (1016), Expect = e-110
Identities = 200/281 (71%), Positives = 224/281 (79%)
Frame = +1
Query: 1 AKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGD 180
AK+DK IH+IVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGD
Sbjct: 324 AKMDKAQIHDIVLVGGSTRIPKIQKLLQDYFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
Query: 181 KSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFSTYSDNQPGVLIQVF 360
KSE VQD GIETAGGVMT LIKRNTTIPTKQTQ F+TYSDNQPGVLIQV+
Sbjct: 384 KSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVY 443
Query: 361 EGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATEKGTGKENKITI 540
EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGI+NVSA +K TGKENKITI
Sbjct: 444 EGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAVDKSTGKENKITI 503
Query: 541 TNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQMKSTIEDEKLKDKIS 720
TNDKGRLSK+DIERMV ++ AKN LESYA+ MKST+EDEKLK KIS
Sbjct: 504 TNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKIS 563
Query: 721 ESDRKQIVDRCQEAISWLEKNQQATKEEFDYHYKDLEKLCN 843
+ D+++I+D+C E I WL+KNQ A +EEF++ K+LEK+CN
Sbjct: 564 DEDKQKILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCN 604
>sp|Q24789|HSP70_ECHGR Heat shock cognate 70 kDa protein (HSP70)
Length = 665
Score = 395 bits (1015), Expect = e-110
Identities = 196/281 (69%), Positives = 226/281 (80%)
Frame = +1
Query: 1 AKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGD 180
AKLDK A+HEIVLVGGSTRIPK+QKLLQD FNG+ELNKSINPDE IL+GD
Sbjct: 326 AKLDKGAVHEIVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILTGD 385
Query: 181 KSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFSTYSDNQPGVLIQVF 360
KSEAVQD G+ETAGGVMTALIKRNTTIPTKQTQ F+TYSDNQPGVLIQV+
Sbjct: 386 KSEAVQDLLLLDVAPLSLGLETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVY 445
Query: 361 EGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATEKGTGKENKITI 540
EGERAM +DNNLLGKFELSGIPP PRGVPQIEVTFDIDANGILNVSA +K TGK+NKITI
Sbjct: 446 EGERAMKRDNNLLGKFELSGIPPGPRGVPQIEVTFDIDANGILNVSAVDKSTGKQNKITI 505
Query: 541 TNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQMKSTIEDEKLKDKIS 720
T DKGRLSK++IERMVN R+ AKN LESYA+ MKST+EDEK+K+KI
Sbjct: 506 TRDKGRLSKEEIERMVNDAEKFKQEDEKQRDRVAAKNGLESYAFSMKSTVEDEKVKEKIG 565
Query: 721 ESDRKQIVDRCQEAISWLEKNQQATKEEFDYHYKDLEKLCN 843
ESDR++I+++C+E + WL+ NQQA KEE+++ K+LE +CN
Sbjct: 566 ESDRRRIMEKCEETVKWLDGNQQAEKEEYEHRQKELESVCN 606
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 394 bits (1013), Expect = e-109
Identities = 197/281 (70%), Positives = 224/281 (79%)
Frame = +1
Query: 1 AKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGD 180
AK+DK +H+IVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGD
Sbjct: 324 AKMDKAQVHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
Query: 181 KSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFSTYSDNQPGVLIQVF 360
KSE VQD GIETAGGVMT LIKRNTTIPTKQTQ F+TYSDNQPGVLIQV+
Sbjct: 384 KSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVY 443
Query: 361 EGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATEKGTGKENKITI 540
EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGI+NVSA +K TGKENKITI
Sbjct: 444 EGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAADKSTGKENKITI 503
Query: 541 TNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQMKSTIEDEKLKDKIS 720
TNDKGRLSK+DIERMV ++ +KN LESYA+ MKST+EDEKL+ KIS
Sbjct: 504 TNDKGRLSKEDIERMVQEAEKYKCEDDVQRDKVSSKNSLESYAFNMKSTVEDEKLQGKIS 563
Query: 721 ESDRKQIVDRCQEAISWLEKNQQATKEEFDYHYKDLEKLCN 843
+ D+ +I+++C E I WL+KNQ A KEE+++H K+LEK+CN
Sbjct: 564 DEDKTKILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCN 604
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 394 bits (1012), Expect = e-109
Identities = 198/281 (70%), Positives = 226/281 (80%)
Frame = +1
Query: 1 AKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGD 180
AKLDK+ IH+IVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGD
Sbjct: 324 AKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
Query: 181 KSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFSTYSDNQPGVLIQVF 360
KSE VQD GIETAGGVMT LIKRNTTIPTKQTQ F+TYSDNQPGVLIQV+
Sbjct: 384 KSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVY 443
Query: 361 EGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATEKGTGKENKITI 540
EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K TGKENKITI
Sbjct: 444 EGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITI 503
Query: 541 TNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQMKSTIEDEKLKDKIS 720
TNDKGRLSK+DIERMV ++ +KN L+SYA+ MK+T+EDEKL+ KI+
Sbjct: 504 TNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLKSYAFNMKATVEDEKLQGKIN 563
Query: 721 ESDRKQIVDRCQEAISWLEKNQQATKEEFDYHYKDLEKLCN 843
+ D+++I+D+C E I+WL+KNQ A KEEF++ K+LEK+CN
Sbjct: 564 DEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCN 604
>sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (Hsc 70-4)
Length = 652
Score = 391 bits (1005), Expect = e-108
Identities = 199/281 (70%), Positives = 221/281 (78%)
Frame = +1
Query: 1 AKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGD 180
AK+DK+ IH+IVLVGGSTRIPK+QKLLQD FNGKELNKSINPDE IL GD
Sbjct: 324 AKMDKSQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGD 383
Query: 181 KSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFSTYSDNQPGVLIQVF 360
KSE VQD GIETAGGVMT LIKRNTTIPTKQTQ F+TYSDNQPGVLIQVF
Sbjct: 384 KSEEVQDLLLLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVF 443
Query: 361 EGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATEKGTGKENKITI 540
EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA EK T KENKITI
Sbjct: 444 EGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVEKSTNKENKITI 503
Query: 541 TNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQMKSTIEDEKLKDKIS 720
TNDKGRLSK++IERMVN I AKN LESY + MKST+EDEKLKDKIS
Sbjct: 504 TNDKGRLSKEEIERMVNEAEKYRNEDEKQKETIQAKNALESYCFNMKSTMEDEKLKDKIS 563
Query: 721 ESDRKQIVDRCQEAISWLEKNQQATKEEFDYHYKDLEKLCN 843
+SD++ I+D+C + I WL+ NQ A KEE+++ K+LE +CN
Sbjct: 564 DSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICN 604
>sp|P08106|HSP70_CHICK Heat shock 70 kDa protein (HSP70)
Length = 634
Score = 390 bits (1001), Expect = e-108
Identities = 199/281 (70%), Positives = 221/281 (78%)
Frame = +1
Query: 1 AKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGD 180
AKLDK I EIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE IL GD
Sbjct: 327 AKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILMGD 386
Query: 181 KSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFSTYSDNQPGVLIQVF 360
KSE VQD GIETAGGVMTALIKRNTTIPTKQTQ F+TYSDNQ VL+QV+
Sbjct: 387 KSENVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQSSVLVQVY 446
Query: 361 EGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATEKGTGKENKITI 540
EGERAMTKDNNLLGKF+L+GIPPAPRGVPQIEVTFDIDANGILNVSA +K TGKENKITI
Sbjct: 447 EGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITI 506
Query: 541 TNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQMKSTIEDEKLKDKIS 720
TNDKGRLSKDDI+RMV R+GAKN LESY Y MK T+EDEKLK KIS
Sbjct: 507 TNDKGRLSKDDIDRMVQEAEKYKAEDEANRDRVGAKNSLESYTYNMKQTVEDEKLKGKIS 566
Query: 721 ESDRKQIVDRCQEAISWLEKNQQATKEEFDYHYKDLEKLCN 843
+ D+++++D+CQE IS L++NQ A KEE+++ K+LEKLCN
Sbjct: 567 DQDKQKVLDKCQEVISSLDRNQMAEKEEYEHKQKELEKLCN 607
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.311 0.132 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,128,940
Number of Sequences: 369166
Number of extensions: 1594155
Number of successful extensions: 4904
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4295
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8245425915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)