Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_026_P21
(788 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P20287|G3P_SCHMA Glyceraldehyde-3-phosphate dehydrogenas... 362 e-100
sp|Q9N2D5|G3P_FELCA Glyceraldehyde-3-phosphate dehydrogenas... 361 1e-99
sp|P51469|G3P_XENLA Glyceraldehyde-3-phosphate dehydrogenas... 361 1e-99
sp|O57479|G3P_COLLI Glyceraldehyde-3-phosphate dehydrogenas... 360 3e-99
sp|P00355|G3P_PIG Glyceraldehyde-3-phosphate dehydrogenase ... 359 5e-99
sp|Q05025|G3P_COTJA Glyceraldehyde-3-phosphate dehydrogenas... 358 7e-99
sp|Q28554|G3P_SHEEP Glyceraldehyde-3-phosphate dehydrogenas... 358 9e-99
sp|Q28259|G3P_CANFA Glyceraldehyde-3-phosphate dehydrogenas... 358 1e-98
sp|P00356|G3P_CHICK Glyceraldehyde-3-phosphate dehydrogenas... 357 3e-98
sp|P46406|G3P_RABIT Glyceraldehyde-3-phosphate dehydrogenas... 356 5e-98
>sp|P20287|G3P_SCHMA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (Major larval
surface antigen) (P-37)
Length = 338
Score = 362 bits (928), Expect = e-100
Identities = 177/244 (72%), Positives = 200/244 (81%)
Frame = +2
Query: 11 YVVESTGVFTTIEKASAHTKNNRAKKVVISAPSADAPMFVMGVNHEKYDPSLSIVSNASC 190
YVVESTGVFTTI+KA AH KNNRAKKV+ISAPSADAPMFV+GVN Y+ S+S+VSNASC
Sbjct: 94 YVVESTGVFTTIDKAQAHIKNNRAKKVIISAPSADAPMFVVGVNENSYEKSMSVVSNASC 153
Query: 191 TTNCLAPLAKVVNDHFGIEEGLMTTIHAYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXX 370
TTNCLAPLAKV++D F I EGLMTT+H++TATQK VDGPSSKLWRDGRGA QNIIP
Sbjct: 154 TTNCLAPLAKVIHDKFEIVEGLMTTVHSFTATQKVVDGPSSKLWRDGRGAMQNIIPASTG 213
Query: 371 XXXXXXXXIPELNGKITGMAFRVPVPDVSVVDLTCKLKKAAKYDEIKAAIKHASETTMKG 550
IP LNGK+TGMAFRVP PDVSVVDLTC+L K A Y+EIKAA+K A+ +KG
Sbjct: 214 AAKAVGKVIPALNGKLTGMAFRVPTPDVSVVDLTCRLGKGASYEEIKAAVKAAASGPLKG 273
Query: 551 ILAYTEEEVVSQDFKGDHNSSIFDAKAGIQLTDTFVKLVAWYDNEYGYSCRVIDLIQHMS 730
IL YTE+EVVS DF G +SSIFDAKAGI L + FVKLV+WYDNE+GYSCRV+DLI HM
Sbjct: 274 ILEYTEDEVVSSDFVGSTSSSIFDAKAGISLNNNFVKLVSWYDNEFGYSCRVVDLITHMH 333
Query: 731 TKDH 742
DH
Sbjct: 334 KVDH 337
>sp|Q9N2D5|G3P_FELCA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 361 bits (927), Expect = 1e-99
Identities = 179/243 (73%), Positives = 203/243 (83%)
Frame = +2
Query: 11 YVVESTGVFTTIEKASAHTKNNRAKKVVISAPSADAPMFVMGVNHEKYDPSLSIVSNASC 190
YVVESTGVFTT+EKA AH K AK+V+ISAPSADAPMFVMGVNHEKYD SL IVSNASC
Sbjct: 92 YVVESTGVFTTMEKAGAHLKGG-AKRVIISAPSADAPMFVMGVNHEKYDNSLKIVSNASC 150
Query: 191 TTNCLAPLAKVVNDHFGIEEGLMTTIHAYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXX 370
TTNCLAPLAKV++DHFGI EGLMTT+HA TATQKTVDGPS KLWRDGRGAAQNIIP
Sbjct: 151 TTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTG 210
Query: 371 XXXXXXXXIPELNGKITGMAFRVPVPDVSVVDLTCKLKKAAKYDEIKAAIKHASETTMKG 550
IPELNGK+TGMAFRVP P+VSVVDLTC+L+KAAKYD+IK +K ASE +KG
Sbjct: 211 AAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKG 270
Query: 551 ILAYTEEEVVSQDFKGDHNSSIFDAKAGIQLTDTFVKLVAWYDNEYGYSCRVIDLIQHMS 730
IL YTE++VVS DF D +SS FDA AGI L D FVKL++WYDNE+GYS RV+DL+ HM+
Sbjct: 271 ILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMAHMA 330
Query: 731 TKD 739
+K+
Sbjct: 331 SKE 333
>sp|P51469|G3P_XENLA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 361 bits (927), Expect = 1e-99
Identities = 181/243 (74%), Positives = 204/243 (83%)
Frame = +2
Query: 11 YVVESTGVFTTIEKASAHTKNNRAKKVVISAPSADAPMFVMGVNHEKYDPSLSIVSNASC 190
YVVESTGVFTT EKAS H K AK+VVISAPSADAPMFV+GVNHEKY+ SL +VSNASC
Sbjct: 92 YVVESTGVFTTTEKASLHLKGG-AKRVVISAPSADAPMFVVGVNHEKYENSLKVVSNASC 150
Query: 191 TTNCLAPLAKVVNDHFGIEEGLMTTIHAYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXX 370
TTNCLAPLAKV+ND+FGI EGLMTT+HA+TATQKTVDGPS KLWRDGRGA QNIIP
Sbjct: 151 TTNCLAPLAKVINDNFGIVEGLMTTVHAFTATQKTVDGPSGKLWRDGRGAGQNIIPASTG 210
Query: 371 XXXXXXXXIPELNGKITGMAFRVPVPDVSVVDLTCKLKKAAKYDEIKAAIKHASETTMKG 550
IPELNGKITGMAFRVP P+VSVVDLTC+L+K AKYD+IKAAIK ASE MKG
Sbjct: 211 AAKAVGKVIPELNGKITGMAFRVPTPNVSVVDLTCRLQKPAKYDDIKAAIKTASEGPMKG 270
Query: 551 ILAYTEEEVVSQDFKGDHNSSIFDAKAGIQLTDTFVKLVAWYDNEYGYSCRVIDLIQHMS 730
IL YT+++VVS DF GD +SSIFDA AGI L + FVKLV+WYDNE GYS RV+DL+ HM+
Sbjct: 271 ILGYTQDQVVSTDFNGDTHSSIFDADAGIALNENFVKLVSWYDNECGYSNRVVDLVCHMA 330
Query: 731 TKD 739
+K+
Sbjct: 331 SKE 333
>sp|O57479|G3P_COLLI Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 360 bits (923), Expect = 3e-99
Identities = 179/243 (73%), Positives = 204/243 (83%)
Frame = +2
Query: 11 YVVESTGVFTTIEKASAHTKNNRAKKVVISAPSADAPMFVMGVNHEKYDPSLSIVSNASC 190
YVVESTGVFTT+EKA AH K AK+V+ISAPSADAPMFVMGVNHEKYD SL IVSNASC
Sbjct: 92 YVVESTGVFTTMEKAGAHLKGG-AKRVIISAPSADAPMFVMGVNHEKYDKSLKIVSNASC 150
Query: 191 TTNCLAPLAKVVNDHFGIEEGLMTTIHAYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXX 370
TTNCLAPLAKV++D+FGI EGLMTT+HA TATQKTVDGPS KLWRDGRGAAQNIIP
Sbjct: 151 TTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTG 210
Query: 371 XXXXXXXXIPELNGKITGMAFRVPVPDVSVVDLTCKLKKAAKYDEIKAAIKHASETTMKG 550
IPELNGK+TGMAFRVP P+VSVVDLTC+L+K AKYD+IK +K A++ +KG
Sbjct: 211 AAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAKYDDIKRVVKAAADGPLKG 270
Query: 551 ILAYTEEEVVSQDFKGDHNSSIFDAKAGIQLTDTFVKLVAWYDNEYGYSCRVIDLIQHMS 730
ILAYTE++VVS DF GD +SS FDA AGI L D FVKLV+WYDNEYGYS RV+DL+ HM+
Sbjct: 271 ILAYTEDQVVSCDFNGDSHSSTFDAGAGIALNDHFVKLVSWYDNEYGYSNRVVDLMVHMA 330
Query: 731 TKD 739
+K+
Sbjct: 331 SKE 333
>sp|P00355|G3P_PIG Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 359 bits (921), Expect = 5e-99
Identities = 178/243 (73%), Positives = 202/243 (83%)
Frame = +2
Query: 11 YVVESTGVFTTIEKASAHTKNNRAKKVVISAPSADAPMFVMGVNHEKYDPSLSIVSNASC 190
YVVESTGVFTT+EKA AH K AK+V+ISAPSADAPMFVMGVNHEKYD SL IVSNASC
Sbjct: 92 YVVESTGVFTTMEKAGAHLKGG-AKRVIISAPSADAPMFVMGVNHEKYDNSLKIVSNASC 150
Query: 191 TTNCLAPLAKVVNDHFGIEEGLMTTIHAYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXX 370
TTNCLAPLAKV++DHFGI EGLMTT+HA TATQKTVDGPS KLWRDGRGAAQNIIP
Sbjct: 151 TTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTG 210
Query: 371 XXXXXXXXIPELNGKITGMAFRVPVPDVSVVDLTCKLKKAAKYDEIKAAIKHASETTMKG 550
IPELNGK+TGMAFRVP P+VSVVDLTC+L+K AKYD+IK +K ASE +KG
Sbjct: 211 AAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKG 270
Query: 551 ILAYTEEEVVSQDFKGDHNSSIFDAKAGIQLTDTFVKLVAWYDNEYGYSCRVIDLIQHMS 730
IL YTE++VVS DF D +SS FDA AGI L D FVKL++WYDNE+GYS RV+DL+ HM+
Sbjct: 271 ILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMA 330
Query: 731 TKD 739
+K+
Sbjct: 331 SKE 333
>sp|Q05025|G3P_COTJA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 358 bits (920), Expect = 7e-99
Identities = 178/243 (73%), Positives = 203/243 (83%)
Frame = +2
Query: 11 YVVESTGVFTTIEKASAHTKNNRAKKVVISAPSADAPMFVMGVNHEKYDPSLSIVSNASC 190
YVVESTGVFTT+EKA AH K AK+V+ISAPSADAPMFVMGVNHEKYD SL IVSNASC
Sbjct: 92 YVVESTGVFTTMEKAGAHLKGG-AKRVIISAPSADAPMFVMGVNHEKYDKSLKIVSNASC 150
Query: 191 TTNCLAPLAKVVNDHFGIEEGLMTTIHAYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXX 370
TTNCLAPLAKV++D+FGI EGLMTT+HA TATQKTVDGPS KLWRDGRGAAQNIIP
Sbjct: 151 TTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTG 210
Query: 371 XXXXXXXXIPELNGKITGMAFRVPVPDVSVVDLTCKLKKAAKYDEIKAAIKHASETTMKG 550
IPELNGK+TGMAFRVP P+VSVVDLTC+L+K AKYD+IK +K A+E +KG
Sbjct: 211 AAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAKYDDIKRVVKAAAEGPLKG 270
Query: 551 ILAYTEEEVVSQDFKGDHNSSIFDAKAGIQLTDTFVKLVAWYDNEYGYSCRVIDLIQHMS 730
IL YTE++VVS DF GD +SS FDA AGI L D FVKLV+WYDNE+GYS RV+DL+ HM+
Sbjct: 271 ILGYTEDQVVSCDFNGDSHSSTFDAGAGIALNDNFVKLVSWYDNEFGYSNRVVDLMVHMA 330
Query: 731 TKD 739
+K+
Sbjct: 331 SKE 333
>sp|Q28554|G3P_SHEEP Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 322
Score = 358 bits (919), Expect = 9e-99
Identities = 178/243 (73%), Positives = 202/243 (83%)
Frame = +2
Query: 11 YVVESTGVFTTIEKASAHTKNNRAKKVVISAPSADAPMFVMGVNHEKYDPSLSIVSNASC 190
YVVESTGVFTT+EKA AH K AKKV+ISAPSADAPMFVMGVNHEKY+ +L IVSNASC
Sbjct: 81 YVVESTGVFTTMEKAGAHLKGG-AKKVIISAPSADAPMFVMGVNHEKYNNTLKIVSNASC 139
Query: 191 TTNCLAPLAKVVNDHFGIEEGLMTTIHAYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXX 370
TTNCLAPLAKV++DHFGI EGLMTT+HA TATQKTVDGPS KLWRDGRGAAQNIIP
Sbjct: 140 TTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTG 199
Query: 371 XXXXXXXXIPELNGKITGMAFRVPVPDVSVVDLTCKLKKAAKYDEIKAAIKHASETTMKG 550
IPELNGK+TGMAFRVP P+VSVVDLTC+L+K AKYDEIK +K ASE +KG
Sbjct: 200 AAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAKYDEIKKVVKQASEGPLKG 259
Query: 551 ILAYTEEEVVSQDFKGDHNSSIFDAKAGIQLTDTFVKLVAWYDNEYGYSCRVIDLIQHMS 730
IL YTE++VVS DF D +SS FDA AGI L D FVKL++WYDNE+GYS RV+DL+ HM+
Sbjct: 260 ILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMA 319
Query: 731 TKD 739
+K+
Sbjct: 320 SKE 322
>sp|Q28259|G3P_CANFA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 358 bits (918), Expect = 1e-98
Identities = 177/243 (72%), Positives = 203/243 (83%)
Frame = +2
Query: 11 YVVESTGVFTTIEKASAHTKNNRAKKVVISAPSADAPMFVMGVNHEKYDPSLSIVSNASC 190
YVVESTGVFTT+EKA AH K AK+V+ISAPSADAPMFVMGVNHEKYD SL IVSNASC
Sbjct: 92 YVVESTGVFTTMEKAGAHLKGG-AKRVIISAPSADAPMFVMGVNHEKYDNSLKIVSNASC 150
Query: 191 TTNCLAPLAKVVNDHFGIEEGLMTTIHAYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXX 370
TTNCLAPLAKV++DHFGI EGLMTT+HA TATQKTVDGPS K+WRDGRGAAQNIIP
Sbjct: 151 TTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGKMWRDGRGAAQNIIPASTG 210
Query: 371 XXXXXXXXIPELNGKITGMAFRVPVPDVSVVDLTCKLKKAAKYDEIKAAIKHASETTMKG 550
IPELNGK+TGMAFRVP P+VSVVDLTC+L+KAAKYD+IK +K ASE +KG
Sbjct: 211 AAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKG 270
Query: 551 ILAYTEEEVVSQDFKGDHNSSIFDAKAGIQLTDTFVKLVAWYDNEYGYSCRVIDLIQHMS 730
IL YTE++VVS DF D +SS FDA AGI L D FVKL++WYDNE+GYS RV+DL+ +M+
Sbjct: 271 ILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVYMA 330
Query: 731 TKD 739
+K+
Sbjct: 331 SKE 333
>sp|P00356|G3P_CHICK Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 357 bits (915), Expect = 3e-98
Identities = 177/243 (72%), Positives = 203/243 (83%)
Frame = +2
Query: 11 YVVESTGVFTTIEKASAHTKNNRAKKVVISAPSADAPMFVMGVNHEKYDPSLSIVSNASC 190
YVVESTGVFTT+EKA AH K AK+V+ISAPSADAPMFVMGVNHEKYD SL IVSNASC
Sbjct: 92 YVVESTGVFTTMEKAGAHLKGG-AKRVIISAPSADAPMFVMGVNHEKYDKSLKIVSNASC 150
Query: 191 TTNCLAPLAKVVNDHFGIEEGLMTTIHAYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXX 370
TTNCLAPLAKV++D+FGI EGLMTT+HA TATQKTVDGPS KLWRDGRGAAQNIIP
Sbjct: 151 TTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTG 210
Query: 371 XXXXXXXXIPELNGKITGMAFRVPVPDVSVVDLTCKLKKAAKYDEIKAAIKHASETTMKG 550
IPELNGK+TGMAFRVP P+VSVVDLTC+L+K AKYD+IK +K A++ +KG
Sbjct: 211 AAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAKYDDIKRVVKAAADGPLKG 270
Query: 551 ILAYTEEEVVSQDFKGDHNSSIFDAKAGIQLTDTFVKLVAWYDNEYGYSCRVIDLIQHMS 730
IL YTE++VVS DF GD +SS FDA AGI L D FVKLV+WYDNE+GYS RV+DL+ HM+
Sbjct: 271 ILGYTEDQVVSCDFNGDSHSSTFDAGAGIALNDHFVKLVSWYDNEFGYSNRVVDLMVHMA 330
Query: 731 TKD 739
+K+
Sbjct: 331 SKE 333
>sp|P46406|G3P_RABIT Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 356 bits (913), Expect = 5e-98
Identities = 177/243 (72%), Positives = 201/243 (82%)
Frame = +2
Query: 11 YVVESTGVFTTIEKASAHTKNNRAKKVVISAPSADAPMFVMGVNHEKYDPSLSIVSNASC 190
YVVESTGVFTT+EKA AH K AK+V+ISAPS DAPMFVMGVNHEKYD SL IVSNASC
Sbjct: 92 YVVESTGVFTTMEKAGAHLKGG-AKRVIISAPSXDAPMFVMGVNHEKYDNSLKIVSNASC 150
Query: 191 TTNCLAPLAKVVNDHFGIEEGLMTTIHAYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXX 370
TTNCLAPLAKV++DHFGI EGLMTT+HA TATQKTVDGPS KLWRDGRGAAQNIIP
Sbjct: 151 TTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTG 210
Query: 371 XXXXXXXXIPELNGKITGMAFRVPVPDVSVVDLTCKLKKAAKYDEIKAAIKHASETTMKG 550
IPELNGK+TGMAFRVP P+VSVVDLTC+L+KAAKYD+IK +K ASE +KG
Sbjct: 211 AAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKG 270
Query: 551 ILAYTEEEVVSQDFKGDHNSSIFDAKAGIQLTDTFVKLVAWYDNEYGYSCRVIDLIQHMS 730
IL YTE++VVS DF +SS FDA AGI L D FVKL++WYDNE+GYS RV+DL+ HM+
Sbjct: 271 ILGYTEDQVVSCDFNSATHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMA 330
Query: 731 TKD 739
+K+
Sbjct: 331 SKE 333
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,547,299
Number of Sequences: 369166
Number of extensions: 1709888
Number of successful extensions: 4822
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4453
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7454154400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)