Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_026_P15
(852 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cy... 386 e-107
sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cy... 384 e-106
sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cy... 382 e-106
sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cy... 379 e-105
sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cyto... 376 e-104
sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cy... 371 e-102
sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP... 369 e-102
sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mi... 362 e-100
sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mi... 361 1e-99
sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP... 341 1e-93
>sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 386 bits (992), Expect = e-107
Identities = 185/284 (65%), Positives = 222/284 (78%)
Frame = +1
Query: 1 TLPKNVRDYIIEKANICKPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVRTD 180
+LP+ VR+++ A +C+PDHI +CDGSEEEN L+ + ++G ++ L KY+NCWL TD
Sbjct: 22 SLPQAVREFLENNAELCQPDHIHICDGSEEENGRLLGQMEEEGILRRLKKYDNCWLALTD 81
Query: 181 PADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTM 360
P DVAR+ESKT I T+ +R T+P Q LG WMSE D E A N RFPGCMKGRTM
Sbjct: 82 PRDVARIESKTVIVTQEQRDTVPIPKTGLSQ--LGRWMSEEDFEKAFNARFPGCMKGRTM 139
Query: 361 YVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGV 540
YVIPFSMGP+G PLSKIGIELTDSPYVV SM+IMTRMG VLE++ D FVK LHSVG
Sbjct: 140 YVIPFSMGPLGSPLSKIGIELTDSPYVVASMRIMTRMGTPVLEALGDGE-FVKCLHSVGC 198
Query: 541 PLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDE 720
PLP ++ ++N WPCNPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E
Sbjct: 199 PLPLQKPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASRLAKEE 258
Query: 721 KWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPG 852
W AEHMLILG+T P GEK Y+ AAFPSACGKTNLAM+ P++PG
Sbjct: 259 GWLAEHMLILGITNPEGEKKYLAAAFPSACGKTNLAMMNPSLPG 302
>sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 384 bits (986), Expect = e-106
Identities = 185/284 (65%), Positives = 221/284 (77%)
Frame = +1
Query: 1 TLPKNVRDYIIEKANICKPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVRTD 180
+LP+ VR ++ A +C+PDHI +CDGSEEEN L+ + ++G ++ L KY+NCWL TD
Sbjct: 22 SLPQAVRKFLENNAELCQPDHIHICDGSEEENGRLLGQMEEEGILRRLKKYDNCWLALTD 81
Query: 181 PADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTM 360
P DVAR+ SKT I T+ +R T+P Q LG WMSE D E ALN RFPGCMKGRTM
Sbjct: 82 PRDVARIGSKTVIVTQEQRDTVPIPKTGLSQ--LGRWMSEEDFEKALNARFPGCMKGRTM 139
Query: 361 YVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGV 540
YVIPFSMGP+G PLSKIGIELTDSPYVV SM+IMTRMG VLE++ D FVK LHSVG
Sbjct: 140 YVIPFSMGPLGSPLSKIGIELTDSPYVVASMRIMTRMGTPVLEALGDGE-FVKCLHSVGC 198
Query: 541 PLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDE 720
PLP ++ ++N WPCNPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E
Sbjct: 199 PLPLQKPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASRLAKEE 258
Query: 721 KWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPG 852
W AEHMLILG+T P GEK Y+ AAFPSACGKTNLAM+ P++PG
Sbjct: 259 GWLAEHMLILGITNPEGEKKYLAAAFPSACGKTNLAMMNPSLPG 302
>sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 382 bits (982), Expect = e-106
Identities = 183/284 (64%), Positives = 220/284 (77%)
Frame = +1
Query: 1 TLPKNVRDYIIEKANICKPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVRTD 180
+LP+ VR ++ A +C+PD + +CDGSEEEN+ L+ + ++G +K L KY+NCWL TD
Sbjct: 22 SLPQAVRSFVESSAKLCRPDQVHICDGSEEENRQLLSHMEEEGVIKRLKKYDNCWLALTD 81
Query: 181 PADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTM 360
P DVAR+ESKT I T+ +R T+P + Q LG WMSE D E A N RFPGCMKGRTM
Sbjct: 82 PRDVARIESKTVIITREQRDTVPIPKNGLSQ--LGRWMSEEDFEKAFNIRFPGCMKGRTM 139
Query: 361 YVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGV 540
YVIPFSMGP+G PLSKIGIELTDSPYVV SM+IMTRMG VLE++ D FVK LHSVG
Sbjct: 140 YVIPFSMGPLGSPLSKIGIELTDSPYVVTSMRIMTRMGTSVLEALGDGE-FVKCLHSVGC 198
Query: 541 PLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDE 720
PLP ++ ++N W CNPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E
Sbjct: 199 PLPLKKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASRLAKEE 258
Query: 721 KWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPG 852
W AEHMLILG+T P G+K Y AAFPSACGKTNLAM+ PT+PG
Sbjct: 259 GWLAEHMLILGITNPKGQKKYFAAAFPSACGKTNLAMMNPTLPG 302
>sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 379 bits (972), Expect = e-105
Identities = 183/284 (64%), Positives = 220/284 (77%)
Frame = +1
Query: 1 TLPKNVRDYIIEKANICKPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVRTD 180
+LP VR++I A +C+P+ I +CDGSEEENK +++ +V+QG +K L+KYENCWL T+
Sbjct: 22 SLPPQVREFIESNAKLCQPESIHICDGSEEENKKILDIMVEQGMIKKLSKYENCWLALTN 81
Query: 181 PADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTM 360
P DVAR+ESKT I T+ +R TIP Q LG WMSE D E A N RFPGCM+GRTM
Sbjct: 82 PRDVARIESKTVIITQEQRDTIPIPKTGSSQ--LGRWMSEEDFEKAFNTRFPGCMQGRTM 139
Query: 361 YVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGV 540
YVIPFSMGPIG PL+KIGIELTDSPYVV SM++MTRMG L+++ + FVK LHSVG
Sbjct: 140 YVIPFSMGPIGSPLAKIGIELTDSPYVVASMRMMTRMGTAALKALGNGE-FVKCLHSVGC 198
Query: 541 PLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDE 720
PLP + +IN WPCNPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S +A++E
Sbjct: 199 PLPLKEPLINNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRIAKEE 258
Query: 721 KWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPG 852
W AEHMLILG+T P GEK Y AAFPSACGKTNLAM+ P+ PG
Sbjct: 259 GWLAEHMLILGITNPEGEKKYFAAAFPSACGKTNLAMMNPSRPG 302
>sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 376 bits (966), Expect = e-104
Identities = 179/284 (63%), Positives = 220/284 (77%)
Frame = +1
Query: 1 TLPKNVRDYIIEKANICKPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVRTD 180
+LP+ VR ++ A +C+P++I +CDGSEEE L+ + ++G ++ L KY+NCWL TD
Sbjct: 22 SLPQEVRKFVEGNAQLCQPEYIHICDGSEEEYGRLLAHMQEEGVIRKLKKYDNCWLALTD 81
Query: 181 PADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTM 360
P DVAR+ESKT I T+ +R T+P Q +LG WMSE D E A N RFPGCMKGRTM
Sbjct: 82 PRDVARIESKTVIITQEQRDTVPIPKSG--QSQLGRWMSEEDFEKAFNARFPGCMKGRTM 139
Query: 361 YVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGV 540
YVIPFSMGP+G PL+KIGIELTDSPYVV SM+IMTRMG VLE++ D F+K LHSVG
Sbjct: 140 YVIPFSMGPLGSPLAKIGIELTDSPYVVASMRIMTRMGTSVLEALGDGE-FIKCLHSVGC 198
Query: 541 PLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDE 720
PLP ++ ++N W CNPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E
Sbjct: 199 PLPLKKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRLAKEE 258
Query: 721 KWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPG 852
W AEHMLILG+T P G+K Y+ AAFPSACGKTNLAM+ PT+PG
Sbjct: 259 GWLAEHMLILGITNPEGKKKYLAAAFPSACGKTNLAMMNPTLPG 302
>sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 371 bits (953), Expect = e-102
Identities = 178/284 (62%), Positives = 219/284 (77%)
Frame = +1
Query: 1 TLPKNVRDYIIEKANICKPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVRTD 180
+LP+ VR ++ A +C+P++I +CDGSEEE L+ + ++G ++ L KY+NCWL TD
Sbjct: 22 SLPQAVRKFVEGNAQLCQPEYIHICDGSEEEYGQLLAHMQEEGVIRKLKKYDNCWLALTD 81
Query: 181 PADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTM 360
P DVAR+ESKT I T+ +R T+P Q LG WMSE D E A N RFPGCMKGRTM
Sbjct: 82 PRDVARIESKTVIITQEQRDTVPIPKTGLSQ--LGRWMSEEDFEKAFNARFPGCMKGRTM 139
Query: 361 YVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGV 540
YVIPFSMGP+G PL+KIGIELTDSPYVV SM+IMTRMG VLE++ D F+K LHSVG
Sbjct: 140 YVIPFSMGPLGSPLAKIGIELTDSPYVVASMRIMTRMGISVLEALGDGE-FIKCLHSVGC 198
Query: 541 PLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDE 720
PLP ++ ++N W CNPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E
Sbjct: 199 PLPLKKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRLAKEE 258
Query: 721 KWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPG 852
W AEHMLILG+T P G+K Y+ AAFPSACGKTNLAM+ P++PG
Sbjct: 259 GWLAEHMLILGITNPEGKKKYLAAAFPSACGKTNLAMMNPSLPG 302
>sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 647
Score = 369 bits (946), Expect = e-102
Identities = 177/281 (62%), Positives = 219/281 (77%)
Frame = +1
Query: 4 LPKNVRDYIIEKANICKPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVRTDP 183
L VR ++ E +C+PD + +CDGSE+ENK+LI+ L++ G++ L KY+NCWL RT+P
Sbjct: 48 LTTGVRAFVEEGIALCQPDQVHICDGSEQENKVLIKSLLEAGTIVPLPKYDNCWLARTNP 107
Query: 184 ADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMY 363
ADVARVES+TFI T+ + TIP T ++G LGNW+S SDM+AA+ RFPGCMKGRTMY
Sbjct: 108 ADVARVESRTFICTERREETIP-TPVEGVKGTLGNWISPSDMDAAVQQRFPGCMKGRTMY 166
Query: 364 VIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVP 543
V+PFSMGP+G PLSKIGIELTDS YVV SM+IMTRMG VL + FV+ALHSVG P
Sbjct: 167 VVPFSMGPVGSPLSKIGIELTDSAYVVASMRIMTRMGAAVLRQLAKKEEFVRALHSVGAP 226
Query: 544 LPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEK 723
+ + WPC+PE+T+I H PA+N I S+GSGYGGNSLLGKKCFALR+GS +A+ E
Sbjct: 227 ANGQVEQPS-WPCDPERTIILHKPAENLIVSYGSGYGGNSLLGKKCFALRIGSTIAKQEG 285
Query: 724 WFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTI 846
W AEHMLILG+T P GEK YITAAFPSACGKTNLAM+ P++
Sbjct: 286 WLAEHMLILGITDPKGEKKYITAAFPSACGKTNLAMLNPSL 326
>sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 362 bits (929), Expect = e-100
Identities = 171/283 (60%), Positives = 216/283 (76%)
Frame = +1
Query: 4 LPKNVRDYIIEKANICKPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVRTDP 183
LP VRD++ A++C+P+ I +CDG+E EN ++ L +QG ++ L KY+NCWL RTDP
Sbjct: 40 LPAGVRDFVARSAHLCQPEGIHICDGTEAENTAILALLEEQGLIRKLPKYKNCWLARTDP 99
Query: 184 ADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMY 363
DVARVESKT I T +R T+P + +G+LGNWMS + + A+++RFPGCM+GR MY
Sbjct: 100 KDVARVESKTVIVTPSQRDTVPLLAGGA-RGQLGNWMSPDEFQRAVDERFPGCMQGRIMY 158
Query: 364 VIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVP 543
V+PFSMGP+G PLS+IG++LTDS YVV SM+IMTR+G VL+++ D F+K LHSVG P
Sbjct: 159 VLPFSMGPVGSPLSRIGVQLTDSAYVVASMRIMTRLGTPVLQALGDGD-FIKCLHSVGQP 217
Query: 544 LPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEK 723
L + WPCNPEKTLI H+P + EI SFGSGYGGNSLLGKKCFALR+ S LARDE
Sbjct: 218 LTGHGDPVGQWPCNPEKTLIGHVPDQREIVSFGSGYGGNSLLGKKCFALRIASRLARDEG 277
Query: 724 WFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPG 852
W AEHMLILG+T P G+K Y+ AAFPSACGKTNLAM+ P +PG
Sbjct: 278 WLAEHMLILGITNPAGKKRYVAAAFPSACGKTNLAMMRPALPG 320
>sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 361 bits (927), Expect = 1e-99
Identities = 172/283 (60%), Positives = 214/283 (75%)
Frame = +1
Query: 4 LPKNVRDYIIEKANICKPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVRTDP 183
LP +RD++ A +C+P+ I +CDG+E EN + L +QG ++ L KY NCWL RTDP
Sbjct: 40 LPTGIRDFVEHSARLCQPEGIHICDGTEAENTATLTLLEQQGLIRKLPKYNNCWLARTDP 99
Query: 184 ADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMY 363
DVARVESKT I T +R T+P +G+LGNWMS +D + A+++RFPGCM+GRTMY
Sbjct: 100 KDVARVESKTVIVTPSQRDTVP-LPPGGARGQLGNWMSPADFQRAVDERFPGCMQGRTMY 158
Query: 364 VIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVP 543
V+PFSMGP+G PLS+IG++LTDS YVV SM+IMTR+G VL+++ D FVK LHSVG P
Sbjct: 159 VLPFSMGPVGSPLSRIGVQLTDSAYVVASMRIMTRLGTPVLQALGDGD-FVKCLHSVGQP 217
Query: 544 LPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEK 723
L + ++ WPCNPEKTLI H+P + EI SFGSGYGGNSLLGKKCFALR+ S LARDE
Sbjct: 218 LTGQGEPVSQWPCNPEKTLIGHVPDQREIISFGSGYGGNSLLGKKCFALRIASRLARDEG 277
Query: 724 WFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPG 852
W AEHMLILG+T P G+K AAFPSACGKTNLAM+ P +PG
Sbjct: 278 WLAEHMLILGITSPAGKKALCAAAFPSACGKTNLAMMRPALPG 320
>sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 643
Score = 341 bits (875), Expect = 1e-93
Identities = 168/285 (58%), Positives = 211/285 (74%), Gaps = 1/285 (0%)
Frame = +1
Query: 1 TLPKNVRDYIIEKANICKPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVRTD 180
+LPK+V+ ++ EKA + KP I +CDGS+ E LI V++G + L Y+N +L RTD
Sbjct: 37 SLPKHVQRFVAEKAELMKPSAIFICDGSQNEADELIARCVERGVLVPLKAYKNNYLCRTD 96
Query: 181 PADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTM 360
P DVARVESKT++ T K ++ T + ++ +G WMS + L+DRFPGCM GRTM
Sbjct: 97 PRDVARVESKTWMITPEKYDSVCHTPEG-VKPMMGQWMSPDEFGKELDDRFPGCMAGRTM 155
Query: 361 YVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDST-PFVKALHSVG 537
YVIP+SMGP+GGPLSKIGIELTDS YVV M+IMTRMG VL+++ + FV+ +HSVG
Sbjct: 156 YVIPYSMGPVGGPLSKIGIELTDSDYVVLCMRIMTRMGEPVLKALAKNNGEFVRCVHSVG 215
Query: 538 VPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARD 717
P P +IN WPCNPEKT+IAH PA+ EI SFGSGYGGNSLLGKKCFALR+ + D
Sbjct: 216 QPKPVATKVINHWPCNPEKTIIAHRPAEREIWSFGSGYGGNSLLGKKCFALRIAMNIGYD 275
Query: 718 EKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPG 852
E W AEHMLI+G+T P GE+ ++ AAFPSACGKTNLAM+EPTIPG
Sbjct: 276 EGWMAEHMLIMGVTSPKGEERFVAAAFPSACGKTNLAMLEPTIPG 320
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,440,938
Number of Sequences: 369166
Number of extensions: 2335317
Number of successful extensions: 6064
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5928
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8390082510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)