Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_026_M24
(823 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cy... 410 e-114
sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cy... 409 e-114
sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cy... 408 e-114
sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cyto... 401 e-111
sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cy... 400 e-111
sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cy... 393 e-109
sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP... 391 e-108
sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mi... 385 e-106
sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mi... 384 e-106
sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP... 377 e-104
>sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 410 bits (1053), Expect = e-114
Identities = 196/274 (71%), Positives = 222/274 (81%)
Frame = +1
Query: 1 SKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPC 180
SKIGIELTDSPYVV SM+IMTRMG VLE++ D FVK LHSVG PLP ++ ++N WPC
Sbjct: 154 SKIGIELTDSPYVVASMRIMTRMGTPVLEALGDGE-FVKCLHSVGCPLPLQKPLVNNWPC 212
Query: 181 NPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTP 360
NPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E W AEHMLILG+T
Sbjct: 213 NPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASRLAKEEGWLAEHMLILGITN 272
Query: 361 PNGEKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINPEAGF 540
P GEK Y+ AAFPSACGKTNLAM+ P++PG+KVECVGDDIAWMKFD++G LRAINPE GF
Sbjct: 273 PEGEKKYLAAAFPSACGKTNLAMMNPSLPGWKVECVGDDIAWMKFDAQGHLRAINPENGF 332
Query: 541 FGVAPGTSHSTNPNAMKCIQRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPW 720
FGVAPGTS TNPNA+K IQ+NTIFTNVAETSDGG YWEG+ DE + I W+ K W
Sbjct: 333 FGVAPGTSVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGI-DEPLASGVTITSWKNKEW 391
Query: 721 TKNCGRVAAHPNSRFCCPASQCPIIDKNWESPNG 822
+ G AHPNSRFC PASQCPIID WESP G
Sbjct: 392 SSEDGEPCAHPNSRFCTPASQCPIIDAAWESPEG 425
>sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 409 bits (1052), Expect = e-114
Identities = 196/274 (71%), Positives = 222/274 (81%)
Frame = +1
Query: 1 SKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPC 180
SKIGIELTDSPYVV SM+IMTRMG VLE++ D FVK LHSVG PLP ++ ++N WPC
Sbjct: 154 SKIGIELTDSPYVVASMRIMTRMGTPVLEALGDGE-FVKCLHSVGCPLPLQKPLVNNWPC 212
Query: 181 NPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTP 360
NPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E W AEHMLILG+T
Sbjct: 213 NPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASRLAKEEGWLAEHMLILGITN 272
Query: 361 PNGEKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINPEAGF 540
P GEK Y+ AAFPSACGKTNLAM+ P++PG+KVECVGDDIAWMKFD++G LRAINPE GF
Sbjct: 273 PEGEKKYLAAAFPSACGKTNLAMMNPSLPGWKVECVGDDIAWMKFDAQGHLRAINPENGF 332
Query: 541 FGVAPGTSHSTNPNAMKCIQRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPW 720
FGVAPGTS TNPNA+K IQ+NTIFTNVAETSDGG YWEG+ DE + I W+ K W
Sbjct: 333 FGVAPGTSVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGI-DEPLASGVTITSWKNKEW 391
Query: 721 TKNCGRVAAHPNSRFCCPASQCPIIDKNWESPNG 822
+ G AHPNSRFC PASQCPIID WESP G
Sbjct: 392 SPEDGEPCAHPNSRFCTPASQCPIIDAAWESPEG 425
>sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 408 bits (1049), Expect = e-114
Identities = 195/274 (71%), Positives = 223/274 (81%)
Frame = +1
Query: 1 SKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPC 180
SKIGIELTDSPYVV SM+IMTRMG VLE++ D FVK LHSVG PLP ++ ++N W C
Sbjct: 154 SKIGIELTDSPYVVTSMRIMTRMGTSVLEALGDGE-FVKCLHSVGCPLPLKKPLVNNWAC 212
Query: 181 NPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTP 360
NPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E W AEHMLILG+T
Sbjct: 213 NPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASRLAKEEGWLAEHMLILGITN 272
Query: 361 PNGEKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINPEAGF 540
P G+K Y AAFPSACGKTNLAM+ PT+PG+KVECVGDDIAWMKFD +G+LRAINPE GF
Sbjct: 273 PKGQKKYFAAAFPSACGKTNLAMMNPTLPGWKVECVGDDIAWMKFDQQGNLRAINPENGF 332
Query: 541 FGVAPGTSHSTNPNAMKCIQRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPW 720
FGVAPGTS TNPNA+K IQ+NTIFTNVAETSDGG YWEG+ D+ +++I W+GK W
Sbjct: 333 FGVAPGTSVRTNPNAIKTIQKNTIFTNVAETSDGGVYWEGI-DQPLAARVKLISWKGKEW 391
Query: 721 TKNCGRVAAHPNSRFCCPASQCPIIDKNWESPNG 822
G AHPNSRFC PASQCPIID +WESP G
Sbjct: 392 DPKDGEPCAHPNSRFCTPASQCPIIDPDWESPEG 425
>sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 401 bits (1031), Expect = e-111
Identities = 192/274 (70%), Positives = 220/274 (80%)
Frame = +1
Query: 1 SKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPC 180
+KIGIELTDSPYVV SM+IMTRMG VLE++ D F+K LHSVG PLP ++ ++N W C
Sbjct: 154 AKIGIELTDSPYVVASMRIMTRMGTSVLEALGDGE-FIKCLHSVGCPLPLKKPLVNNWAC 212
Query: 181 NPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTP 360
NPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E W AEHMLILG+T
Sbjct: 213 NPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRLAKEEGWLAEHMLILGITN 272
Query: 361 PNGEKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINPEAGF 540
P G+K Y+ AAFPSACGKTNLAM+ PT+PG+KVECVGDDIAWMKFD++G+LRAINPE GF
Sbjct: 273 PEGKKKYLAAAFPSACGKTNLAMMNPTLPGWKVECVGDDIAWMKFDAQGNLRAINPENGF 332
Query: 541 FGVAPGTSHSTNPNAMKCIQRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPW 720
FGVAPGTS TNPNA+K IQ+NTIFTNVAETSDGG YWEG+ DE + I W+ K W
Sbjct: 333 FGVAPGTSVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGI-DEPLAPGVTITSWKNKEW 391
Query: 721 TKNCGRVAAHPNSRFCCPASQCPIIDKNWESPNG 822
AHPNSRFC PASQCPIID WESP G
Sbjct: 392 RPQDEEPCAHPNSRFCTPASQCPIIDPAWESPEG 425
>sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 400 bits (1028), Expect = e-111
Identities = 191/274 (69%), Positives = 220/274 (80%)
Frame = +1
Query: 1 SKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPC 180
+KIGIELTDSPYVV SM+IMTRMG VLE++ D F+K LHSVG PLP ++ ++N W C
Sbjct: 154 AKIGIELTDSPYVVASMRIMTRMGISVLEALGDGE-FIKCLHSVGCPLPLKKPLVNNWAC 212
Query: 181 NPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTP 360
NPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E W AEHMLILG+T
Sbjct: 213 NPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRLAKEEGWLAEHMLILGITN 272
Query: 361 PNGEKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINPEAGF 540
P G+K Y+ AAFPSACGKTNLAM+ P++PG+KVECVGDDIAWMKFD++G+LRAINPE GF
Sbjct: 273 PEGKKKYLAAAFPSACGKTNLAMMNPSLPGWKVECVGDDIAWMKFDAQGNLRAINPENGF 332
Query: 541 FGVAPGTSHSTNPNAMKCIQRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPW 720
FGVAPGTS TNPNA+K IQ+NTIFTNVAETSDGG YWEG+ DE + I W+ K W
Sbjct: 333 FGVAPGTSVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGI-DEPLAPGVTITSWKNKEW 391
Query: 721 TKNCGRVAAHPNSRFCCPASQCPIIDKNWESPNG 822
AHPNSRFC PASQCPIID WESP G
Sbjct: 392 RPQDAEPCAHPNSRFCTPASQCPIIDPAWESPEG 425
>sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 393 bits (1009), Expect = e-109
Identities = 186/274 (67%), Positives = 218/274 (79%)
Frame = +1
Query: 1 SKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPC 180
+KIGIELTDSPYVV SM++MTRMG L+++ + FVK LHSVG PLP + +IN WPC
Sbjct: 154 AKIGIELTDSPYVVASMRMMTRMGTAALKALGNGE-FVKCLHSVGCPLPLKEPLINNWPC 212
Query: 181 NPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTP 360
NPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S +A++E W AEHMLILG+T
Sbjct: 213 NPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRIAKEEGWLAEHMLILGITN 272
Query: 361 PNGEKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINPEAGF 540
P GEK Y AAFPSACGKTNLAM+ P+ PG+K+ECVGDDIAWMKFD G+LRAINPE GF
Sbjct: 273 PEGEKKYFAAAFPSACGKTNLAMMNPSRPGWKIECVGDDIAWMKFDELGNLRAINPENGF 332
Query: 541 FGVAPGTSHSTNPNAMKCIQRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPW 720
FGVAPGTS TNPNA+K I +NTIFTNVAETSDGG YWEG+++ + + + W+ K W
Sbjct: 333 FGVAPGTSIKTNPNAIKTIFKNTIFTNVAETSDGGVYWEGIDEPLP-PGVTLTSWKNKDW 391
Query: 721 TKNCGRVAAHPNSRFCCPASQCPIIDKNWESPNG 822
T + G AHPNSRFC PASQCPI+D WESP G
Sbjct: 392 TPDNGEPCAHPNSRFCTPASQCPIMDPAWESPEG 425
>sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 647
Score = 391 bits (1004), Expect = e-108
Identities = 188/274 (68%), Positives = 217/274 (79%)
Frame = +1
Query: 1 SKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPC 180
SKIGIELTDS YVV SM+IMTRMG VL + FV+ALHSVG P + + WPC
Sbjct: 180 SKIGIELTDSAYVVASMRIMTRMGAAVLRQLAKKEEFVRALHSVGAPANGQVEQPS-WPC 238
Query: 181 NPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTP 360
+PE+T+I H PA+N I S+GSGYGGNSLLGKKCFALR+GS +A+ E W AEHMLILG+T
Sbjct: 239 DPERTIILHKPAENLIVSYGSGYGGNSLLGKKCFALRIGSTIAKQEGWLAEHMLILGITD 298
Query: 361 PNGEKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINPEAGF 540
P GEK YITAAFPSACGKTNLAM+ P++ YKVECVGDDIAWMKFDS+G LRAINPE GF
Sbjct: 299 PKGEKKYITAAFPSACGKTNLAMLNPSLANYKVECVGDDIAWMKFDSQGVLRAINPENGF 358
Query: 541 FGVAPGTSHSTNPNAMKCIQRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPW 720
FGVAPGTS TNP AM + +NTIFTNVA TSDGG +WEG+E + N++I DW GKPW
Sbjct: 359 FGVAPGTSMETNPIAMNTVFKNTIFTNVASTSDGGVFWEGMESSL-APNVQITDWLGKPW 417
Query: 721 TKNCGRVAAHPNSRFCCPASQCPIIDKNWESPNG 822
TK+ G+ AAHPNSRFC PA+QCPIID+ WE P G
Sbjct: 418 TKDSGKPAAHPNSRFCTPAAQCPIIDEAWEDPAG 451
>sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 385 bits (988), Expect = e-106
Identities = 183/274 (66%), Positives = 212/274 (77%)
Frame = +1
Query: 1 SKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPC 180
S+IG++LTDS YVV SM+IMTR+G VL+++ D F+K LHSVG PL + WPC
Sbjct: 172 SRIGVQLTDSAYVVASMRIMTRLGTPVLQALGDGD-FIKCLHSVGQPLTGHGDPVGQWPC 230
Query: 181 NPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTP 360
NPEKTLI H+P + EI SFGSGYGGNSLLGKKCFALR+ S LARDE W AEHMLILG+T
Sbjct: 231 NPEKTLIGHVPDQREIVSFGSGYGGNSLLGKKCFALRIASRLARDEGWLAEHMLILGITN 290
Query: 361 PNGEKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINPEAGF 540
P G+K Y+ AAFPSACGKTNLAM+ P +PG+KVECVGDDIAWM+FDS+G LRAINPE GF
Sbjct: 291 PAGKKRYVAAAFPSACGKTNLAMMRPALPGWKVECVGDDIAWMRFDSEGQLRAINPENGF 350
Query: 541 FGVAPGTSHSTNPNAMKCIQRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPW 720
FGVAPGTS +TNPNAM IQ NT+FTNVAETSDGG YWEG++ + + I W GKPW
Sbjct: 351 FGVAPGTSAATNPNAMATIQSNTLFTNVAETSDGGVYWEGIDQPLP-PGVTITSWLGKPW 409
Query: 721 TKNCGRVAAHPNSRFCCPASQCPIIDKNWESPNG 822
AHPNSRFC PA QCPI+D WE+P G
Sbjct: 410 KPGDKEPCAHPNSRFCVPARQCPIMDPAWEAPEG 443
>sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 384 bits (985), Expect = e-106
Identities = 183/274 (66%), Positives = 212/274 (77%)
Frame = +1
Query: 1 SKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPC 180
S+IG++LTDS YVV SM+IMTR+G VL+++ D FVK LHSVG PL + ++ WPC
Sbjct: 172 SRIGVQLTDSAYVVASMRIMTRLGTPVLQALGDGD-FVKCLHSVGQPLTGQGEPVSQWPC 230
Query: 181 NPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTP 360
NPEKTLI H+P + EI SFGSGYGGNSLLGKKCFALR+ S LARDE W AEHMLILG+T
Sbjct: 231 NPEKTLIGHVPDQREIISFGSGYGGNSLLGKKCFALRIASRLARDEGWLAEHMLILGITS 290
Query: 361 PNGEKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINPEAGF 540
P G+K AAFPSACGKTNLAM+ P +PG+KVECVGDDIAWM+FDS+G LRAINPE GF
Sbjct: 291 PAGKKALCAAAFPSACGKTNLAMMRPALPGWKVECVGDDIAWMRFDSEGRLRAINPENGF 350
Query: 541 FGVAPGTSHSTNPNAMKCIQRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPW 720
FGVAPGTS +TNPNAM IQ NTIFTNVAETSDGG YWEG++ + + + W GKPW
Sbjct: 351 FGVAPGTSATTNPNAMATIQSNTIFTNVAETSDGGVYWEGIDQPLP-PGVTVTSWLGKPW 409
Query: 721 TKNCGRVAAHPNSRFCCPASQCPIIDKNWESPNG 822
AHPNSRFC PA QCPI+D WE+P G
Sbjct: 410 KPGDKEPCAHPNSRFCAPARQCPIMDPAWEAPEG 443
>sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 643
Score = 377 bits (967), Expect = e-104
Identities = 180/275 (65%), Positives = 209/275 (76%), Gaps = 1/275 (0%)
Frame = +1
Query: 1 SKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDST-PFVKALHSVGVPLPTERHIINGWP 177
SKIGIELTDS YVV M+IMTRMG VL+++ + FV+ +HSVG P P +IN WP
Sbjct: 170 SKIGIELTDSDYVVLCMRIMTRMGEPVLKALAKNNGEFVRCVHSVGQPKPVATKVINHWP 229
Query: 178 CNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLT 357
CNPEKT+IAH PA+ EI SFGSGYGGNSLLGKKCFALR+ + DE W AEHMLI+G+T
Sbjct: 230 CNPEKTIIAHRPAEREIWSFGSGYGGNSLLGKKCFALRIAMNIGYDEGWMAEHMLIMGVT 289
Query: 358 PPNGEKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINPEAG 537
P GE+ ++ AAFPSACGKTNLAM+EPTIPG+KV +GDDIAWMKF + G L AINPE G
Sbjct: 290 SPKGEERFVAAAFPSACGKTNLAMLEPTIPGWKVRVIGDDIAWMKFGADGRLYAINPEYG 349
Query: 538 FFGVAPGTSHSTNPNAMKCIQRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKP 717
FFGVAPGTSH TNP AM Q NTIFTNVAET+DG Y+WEGLE EV +++I+W G+P
Sbjct: 350 FFGVAPGTSHKTNPMAMASFQENTIFTNVAETADGEYFWEGLEHEVKNPKVDMINWLGEP 409
Query: 718 WTKNCGRVAAHPNSRFCCPASQCPIIDKNWESPNG 822
W AAHPNSRF PA QCPII +WE P G
Sbjct: 410 WHIGDESKAAHPNSRFTAPAGQCPIIHPDWEKPEG 444
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,533,454
Number of Sequences: 369166
Number of extensions: 2362875
Number of successful extensions: 6095
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5944
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7907893860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)