Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_026_K15
(424 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P23785|GRN_RAT Granulins precursor [Contains: Acrogranin... 76 3e-14
sp|P28799|GRN_HUMAN Granulins precursor (Proepithelin) (PEP... 75 4e-14
sp|P28798|GRN_MOUSE Granulins precursor (Acrogranin) (Proep... 74 1e-13
sp|P28797|GRN_CAVPO Granulins precursor (Proepithelin) (PEP... 72 4e-13
sp|P81013|GRN1_CYPCA Granulin-1 55 5e-08
sp|P81015|GRN3_CYPCA Granulin-3 54 1e-07
sp|P80930|ENA1_HORSE Antimicrobial peptide eNAP-1 54 1e-07
sp|P81014|GRN2_CYPCA Granulin-2 49 4e-06
sp|P80059|PMD1_LOCMI Pars intercerebralis major peptide D1 ... 49 4e-06
sp|P25777|ORYB_ORYSA Oryzain beta chain precursor 44 2e-04
>sp|P23785|GRN_RAT Granulins precursor [Contains: Acrogranin; Granulin-1 (Granulin G);
Granulin-2 (Granulin F); Granulin-3 (Granulin B)
(Epithelin-2); Granulin-4 (Granulin A) (Epithelin-1);
Granulin-5 (Granulin C); Granulin-6 (Granulin D);
Granulin-7 (Granulin E)]
Length = 588
Score = 76.3 bits (186), Expect = 3e-14
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Frame = +3
Query: 3 LHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGDK 182
LHCCP+ T CDL+ +CI + + + P Y V +K +
Sbjct: 242 LHCCPQDTVCDLIQSKCISK----------DYTTDLMTKLPGYPVNE-------VKCDLE 284
Query: 183 NNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC--VTGGC 338
+CPDG TCC + TG +GCCPF+ VCC D CC G+ C TG C
Sbjct: 285 VSCPDG------YTCCRLNTGAWGCCPFTKAVCCEDHIHCCPAGFQCHTETGTC 332
Score = 67.4 bits (163), Expect = 1e-11
Identities = 35/107 (32%), Positives = 47/107 (43%)
Frame = +3
Query: 3 LHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGDK 182
+HCCP G +CDLV+ RCI + P+++ P R+ ++ K
Sbjct: 161 VHCCPHGASCDLVHTRCISPTGTH---PLLKKF-------PAQRTNRAVASFSVVCPDAK 210
Query: 183 NNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 323
CPD TCC + TG YGCCP +CC D CC C
Sbjct: 211 TQCPDDS------TCCELPTGKYGCCPMPNAICCSDHLHCCPQDTVC 251
Score = 64.7 bits (156), Expect = 8e-11
Identities = 36/110 (32%), Positives = 47/110 (42%)
Frame = +3
Query: 6 HCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGDKN 185
HCCP G TC++ + C E +V+ S F K+G+
Sbjct: 477 HCCPAGYTCNVKARTC---------------------EKDAGSVQPSMDLTFGSKVGNVE 515
Query: 186 NCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGG 335
C G C Q+CC G + CCP+ GVCC D R CC G+HC G
Sbjct: 516 -CGAGHFCHDNQSCCKDSQGGWACCPYVKGVCCRDGRHCCPIGFHCSAKG 564
Score = 58.9 bits (141), Expect = 4e-09
Identities = 30/111 (27%), Positives = 48/111 (43%)
Frame = +3
Query: 3 LHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGDK 182
+HCCP G C C ++ P ++ + +A + P + ++ +
Sbjct: 316 IHCCPAGFQCHTETGTC---ELGVLQVPWMKKV-TASLSLPDPQILKNDVP--------- 362
Query: 183 NNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGG 335
C D C TCC + +G +GCCP VCC D + CC G+ C+ G
Sbjct: 363 --CDDFSSCPSNNTCCRLSSGDWGCCPMPEAVCCLDHQHCCPQGFKCMDEG 411
Score = 53.5 bits (127), Expect = 2e-07
Identities = 30/106 (28%), Positives = 37/106 (34%)
Frame = +3
Query: 6 HCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGDKN 185
HCCP G C K C S+ + ++ P G +
Sbjct: 97 HCCPRGFHCSADGKSCSQISDSLL----------GAVQCP----------------GSQF 130
Query: 186 NCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 323
CPD TCC+M G +GCCP CC D CC G C
Sbjct: 131 ECPDSA------TCCIMIDGSWGCCPMPQASCCEDRVHCCPHGASC 170
Score = 51.6 bits (122), Expect = 7e-07
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +3
Query: 180 KNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGG 335
+++CPDG +C L +G CCPFS GV C D + CC G+HC G
Sbjct: 64 RDHCPDG------YSCLLTVSGTSSCCPFSEGVSCDDGQHCCPRGFHCSADG 109
Score = 51.6 bits (122), Expect = 7e-07
Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Frame = +3
Query: 9 CCP-EGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGDKN 185
CCP C L ++ C Q + ++ + D K V ++TL ++ GD
Sbjct: 385 CCPMPEAVCCLDHQHCCPQGFKCMDEGYCQKGDRMVAGLEKMPVRQTTL----LQHGDIG 440
Query: 186 NCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 323
C C QTCC G + CC VCC D + CC GY C
Sbjct: 441 -CDQHTSCPVGQTCCPSLKGSWACCQLPHAVCCEDRQHCCPAGYTC 485
>sp|P28799|GRN_HUMAN Granulins precursor (Proepithelin) (PEPI) [Contains: Acrogranin;
Paragranulin; Granulin-1 (Granulin G); Granulin-2
(Granulin F); Granulin-3 (Granulin B); Granulin-4
(Granulin A); Granulin-5 (Granulin C); Granulin-6
(Granulin D); Granulin-7 (Granulin E)]
Length = 593
Score = 75.5 bits (184), Expect = 4e-14
Identities = 37/109 (33%), Positives = 53/109 (48%)
Frame = +3
Query: 3 LHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGDK 182
LHCCP+ T CDL+ +C+ + N + + P +TV +K +
Sbjct: 244 LHCCPQDTVCDLIQSKCLSKENATTD---------LLTKLPAHTVGD-------VKCDME 287
Query: 183 NNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVT 329
+CPDG TCC + +G +GCCPF+ VCC D CC G+ C T
Sbjct: 288 VSCPDG------YTCCRLQSGAWGCCPFTQAVCCEDHIHCCPAGFTCDT 330
Score = 67.0 bits (162), Expect = 2e-11
Identities = 36/117 (30%), Positives = 47/117 (40%)
Frame = +3
Query: 3 LHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGDK 182
+HCCP G TCD C P + P +E + ++R
Sbjct: 319 IHCCPAGFTCDTQKGTC---EQGPHQVPWMEKAPAHLSLPDPQALKRDV----------- 364
Query: 183 NNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGGCA*LGS 353
C + C TCC + +G +GCCP VCC D + CC GY CV G GS
Sbjct: 365 -PCDNVSSCPSSDTCCQLTSGEWGCCPIPEAVCCSDHQHCCPQGYTCVAEGQCQRGS 420
Score = 65.5 bits (158), Expect = 4e-11
Identities = 37/108 (34%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +3
Query: 3 LHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGD- 179
+HCCP G CDLV+ RCI + T AK + P R+ + D
Sbjct: 162 VHCCPHGAFCDLVHTRCITPTG---------THPLAK-KLPAQRTNRAVALSSSVMCPDA 211
Query: 180 KNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 323
++ CPDG TCC + +G YGCCP CC D CC C
Sbjct: 212 RSRCPDGS------TCCELPSGKYGCCPMPNATCCSDHLHCCPQDTVC 253
Score = 62.4 bits (150), Expect = 4e-10
Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 1/111 (0%)
Frame = +3
Query: 6 HCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGDKN 185
HCCP G TC++ + C E + + +T +G K+
Sbjct: 480 HCCPAGYTCNVKARSC---------------------EKEVVSAQPATFLARSPHVGVKD 518
Query: 186 -NCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGG 335
C +G C QTCC + CCP+ GVCC D R CC G+ C G
Sbjct: 519 VECGEGHFCHDNQTCCRDNRQGWACCPYRQGVCCADRRHCCPAGFRCAARG 569
Score = 53.1 bits (126), Expect = 2e-07
Identities = 28/107 (26%), Positives = 34/107 (31%), Gaps = 1/107 (0%)
Frame = +3
Query: 6 HCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGDKN 185
HCCP G C + C +S +
Sbjct: 97 HCCPRGFHCSADGRSCFQRSGNNSVGAI-------------------------------- 124
Query: 186 NCPDGG-QCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 323
CPD +C TCC+M G +GCCP CC D CC G C
Sbjct: 125 QCPDSQFECPDFSTCCVMVDGSWGCCPMPQASCCEDRVHCCPHGAFC 171
Score = 51.6 bits (122), Expect = 7e-07
Identities = 33/106 (31%), Positives = 42/106 (39%)
Frame = +3
Query: 6 HCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGDKN 185
HCCP+G TC + +C S I + + P S R+ I
Sbjct: 402 HCCPQGYTC-VAEGQCQRGSE----------IVAGLEKMPARRASLSHPRD--IGCDQHT 448
Query: 186 NCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 323
+CP G QTCC G + CC VCC D + CC GY C
Sbjct: 449 SCPVG------QTCCPSLGGSWACCQLPHAVCCEDRQHCCPAGYTC 488
Score = 43.9 bits (102), Expect = 1e-04
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +3
Query: 189 CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGG 335
C C+ +C +G CCPF V C D CC G+HC G
Sbjct: 61 CQVDAHCSAGHSCIFTVSGTSSCCPFPEAVACGDGHHCCPRGFHCSADG 109
>sp|P28798|GRN_MOUSE Granulins precursor (Acrogranin) (Proepithelin) (PEPI) (PC
cell-derived growth factor) (PCDGF) [Contains: Granulin
1; Granulin 2; Granulin 3; Granulin 4; Granulin 5;
Granulin 6; Granulin 7]
Length = 589
Score = 73.9 bits (180), Expect = 1e-13
Identities = 38/109 (34%), Positives = 54/109 (49%)
Frame = +3
Query: 3 LHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGDK 182
LHCCP+ T CDL+ +C+ ++ T D + P Y V+ +K +
Sbjct: 243 LHCCPQDTVCDLIQSKCLSKNY---------TTDLLT-KLPGYPVKE-------VKCDME 285
Query: 183 NNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVT 329
+CP+G TCC + TG +GCCPF+ VCC D CC G+ C T
Sbjct: 286 VSCPEG------YTCCRLNTGAWGCCPFAKAVCCEDHIHCCPAGFQCHT 328
Score = 68.2 bits (165), Expect = 7e-12
Identities = 37/110 (33%), Positives = 51/110 (46%)
Frame = +3
Query: 6 HCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGDKN 185
HCCP G TC++ + C + + I+ PV+ T+ K+G+
Sbjct: 478 HCCPAGYTCNVKARTC-EKDVDFIQPPVLLTLGP--------------------KVGNVE 516
Query: 186 NCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGG 335
C +G C QTCC G + CCP+ GVCC D R CC G+HC G
Sbjct: 517 -CGEGHFCHDNQTCCKDSAGVWACCPYLKGVCCRDGRHCCPGGFHCSARG 565
Score = 67.4 bits (163), Expect = 1e-11
Identities = 35/108 (32%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Frame = +3
Query: 3 LHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGD- 179
+HCCP G +CDLV+ RC+ + + + P R+ F + D
Sbjct: 161 VHCCPHGASCDLVHTRCVSPTGT----------HTLLKKFPAQKTNRAVSLPFSVVCPDA 210
Query: 180 KNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 323
K CPD TCC + TG YGCCP +CC D CC C
Sbjct: 211 KTQCPDDS------TCCELPTGKYGCCPMPNAICCSDHLHCCPQDTVC 252
Score = 61.2 bits (147), Expect = 8e-10
Identities = 31/111 (27%), Positives = 45/111 (40%)
Frame = +3
Query: 3 LHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGDK 182
+HCCP G C H E +++ K+ P + L+
Sbjct: 317 IHCCPAGFQC--------HTEKGTCEMGILQVPWMKKVIAPLRLPDPQILKS-------D 361
Query: 183 NNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGG 335
C D +C TCC + +G +GCCP VCC D + CC G+ C+ G
Sbjct: 362 TPCDDFTRCPTNNTCCKLNSGDWGCCPIPEAVCCSDNQHCCPQGFTCLAQG 412
Score = 60.1 bits (144), Expect = 2e-09
Identities = 31/106 (29%), Positives = 39/106 (36%)
Frame = +3
Query: 6 HCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGDKN 185
HCCP+G C K C S+ P+ ++ P G +
Sbjct: 97 HCCPQGFHCSADGKSCFQMSDNPL----------GAVQCP----------------GSQF 130
Query: 186 NCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 323
CPD TCC+M G +GCCP CC D CC G C
Sbjct: 131 ECPDSA------TCCIMVDGSWGCCPMPQASCCEDRVHCCPHGASC 170
Score = 53.5 bits (127), Expect = 2e-07
Identities = 34/107 (31%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Frame = +3
Query: 6 HCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFM-IKIGDK 182
HCCP+G TC L C K +T +E+ R+ ++IGD
Sbjct: 400 HCCPQGFTC-LAQGYC------------------QKGDTMVAGLEKIPARQTTPLQIGDI 440
Query: 183 NNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 323
C C QTCC G + CC VCC D + CC GY C
Sbjct: 441 G-CDQHTSCPVGQTCCPSLKGSWACCQLPHAVCCEDRQHCCPAGYTC 486
Score = 51.2 bits (121), Expect = 9e-07
Identities = 21/50 (42%), Positives = 25/50 (50%)
Frame = +3
Query: 186 NCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGG 335
+C G C +C L +G CCPFS GV C D CC G+HC G
Sbjct: 60 SCQTHGHCPAGYSCLLTVSGTSSCCPFSKGVSCGDGYHCCPQGFHCSADG 109
>sp|P28797|GRN_CAVPO Granulins precursor (Proepithelin) (PEPI) [Contains: Acrogranin;
Granulin-1; Granulin-2; Granulin-3; Granulin-4;
Granulin-5; Granulin-6; Granulin-7]
Length = 591
Score = 72.4 bits (176), Expect = 4e-13
Identities = 36/109 (33%), Positives = 52/109 (47%)
Frame = +3
Query: 3 LHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGDK 182
LHCCP+ T CDL RC+ Q+ + + P +TV + ++ +
Sbjct: 244 LHCCPQDTVCDLRQSRCLSQNKAK----------TLLTKLPSWTV-------WDVECDQE 286
Query: 183 NNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVT 329
+CP+G QTCC + +G +GCCPF VCC D CC + C T
Sbjct: 287 VSCPEG------QTCCRLQSGKWGCCPFPKAVCCEDHVHCCPERFRCHT 329
Score = 70.1 bits (170), Expect = 2e-12
Identities = 38/110 (34%), Positives = 49/110 (44%)
Frame = +3
Query: 6 HCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGDKN 185
HCCP G TC++ + C + D A + P ST + GD++
Sbjct: 477 HCCPAGYTCNVKARSC------------EKAADGAHLAAP--LAVGSTGGVMDVACGDRH 522
Query: 186 NCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGG 335
C D QTCC G + CCPF GVCC D R CC G+HC + G
Sbjct: 523 FCHDE------QTCCRDSRGGWACCPFHQGVCCKDQRHCCPAGFHCESQG 566
Score = 67.0 bits (162), Expect = 2e-11
Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Frame = +3
Query: 3 LHCCPEGTTCDLVNKRCIHQ-SNEPI--EWPVVETIDSAKIETPKYT--VERSTLREFMI 167
+HCCP G +CDLV+ RC+ + P+ + P T + TP + + + L +I
Sbjct: 148 VHCCPHGASCDLVHIRCVTALGSHPLTTKLPAQRTNYTGAEGTPVVSPGLLPAALPTSVI 207
Query: 168 KIGDKNNCPDG-GQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 323
CPD QC TCCL+ +G YGCCP +CC D CC C
Sbjct: 208 -------CPDSRSQCPDDTTCCLLASGEYGCCPMPNAICCSDHLHCCPQDTVC 253
Score = 49.7 bits (117), Expect = 3e-06
Identities = 29/107 (27%), Positives = 36/107 (33%), Gaps = 1/107 (0%)
Frame = +3
Query: 6 HCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGDKN 185
HCCP G C CI + P + + + +
Sbjct: 83 HCCPYGFHCSTDGGTCIQR-------PDIHLLGAVQ------------------------ 111
Query: 186 NCPDGG-QCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 323
CP G +C TCC M G +GCCP CC D CC G C
Sbjct: 112 -CPGGEFECPDSSTCCHMLDGSWGCCPMPQASCCEDRVHCCPHGASC 157
Score = 46.6 bits (109), Expect = 2e-05
Identities = 21/50 (42%), Positives = 24/50 (48%)
Frame = +3
Query: 186 NCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGG 335
NCP G +C L G CCPFS + C D CC G+HC T G
Sbjct: 52 NCPIG------HSCVLTAAGTAACCPFSQAMACGDGHHCCPYGFHCSTDG 95
Score = 45.8 bits (107), Expect = 4e-05
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = +3
Query: 189 CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 323
C C QTCC G + CC VCC D + CC GY C
Sbjct: 441 CDQHASCPVRQTCCPKLGGGWACCQLPHAVCCEDGQHCCPAGYTC 485
Score = 35.0 bits (79), Expect = 0.065
Identities = 22/94 (23%), Positives = 33/94 (35%)
Frame = +3
Query: 3 LHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIKIGDK 182
+HCCPE C C Q + W ++ P + +
Sbjct: 318 VHCCPERFRCHTEKDTC-EQGLLQVPWAQKTPAQPSRPSQPSPPGPPGPPSP-PGPLRSE 375
Query: 183 NNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCC 284
+C + C CC + +G +GCCP S G C
Sbjct: 376 ISCDEVVSCRPGNICCRLASGEWGCCPSSEGYLC 409
Score = 30.4 bits (67), Expect = 1.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 6 HCCPEGTTCDLVNKRCIHQSN 68
HCCP G C+ RC+H+ +
Sbjct: 554 HCCPAGFHCESQGTRCVHKKS 574
>sp|P81013|GRN1_CYPCA Granulin-1
Length = 57
Score = 55.5 bits (132), Expect = 5e-08
Identities = 24/45 (53%), Positives = 26/45 (57%)
Frame = +3
Query: 189 CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 323
CPDG TCCL G + CCPFS+G CC D CC GYHC
Sbjct: 10 CPDG------TTCCLSPYGVWYCCPFSMGQCCRDGIHCCRHGYHC 48
>sp|P81015|GRN3_CYPCA Granulin-3
Length = 57
Score = 53.9 bits (128), Expect = 1e-07
Identities = 22/45 (48%), Positives = 24/45 (53%)
Frame = +3
Query: 189 CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 323
C G C TCC G + CCPF +G CC D R CC GYHC
Sbjct: 4 CDAGITCPSGTTCCRSPFGVWYCCPFLMGQCCRDGRHCCRHGYHC 48
>sp|P80930|ENA1_HORSE Antimicrobial peptide eNAP-1
Length = 46
Score = 53.9 bits (128), Expect = 1e-07
Identities = 21/43 (48%), Positives = 24/43 (55%)
Frame = +3
Query: 189 CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGY 317
C +G C QTCC G CCP+S GVCC D R CC G+
Sbjct: 4 CGEGHFCHDXQTCCRASQGGXACCPYSQGVCCADQRHCCPVGF 46
>sp|P81014|GRN2_CYPCA Granulin-2
Length = 57
Score = 48.9 bits (115), Expect = 4e-06
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = +3
Query: 207 CAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 323
C TCC G + CCPF +G CC D R CC GY C
Sbjct: 10 CPSRTTCCRSPFGVWYCCPFLMGQCCRDGRHCCRHGYRC 48
>sp|P80059|PMD1_LOCMI Pars intercerebralis major peptide D1 (PMP-D1)
Length = 54
Score = 48.9 bits (115), Expect = 4e-06
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = +3
Query: 207 CAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 323
C G +TCC G GCCP+ GVCC D CC G C
Sbjct: 7 CPGTETCCTTPQGEEGCCPYKEGVCCLDGIHCCPSGTVC 45
Score = 33.9 bits (76), Expect = 0.14
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 3 LHCCPEGTTCDLVNKRCI 56
+HCCP GT CD ++RCI
Sbjct: 36 IHCCPSGTVCDEDHRRCI 53
>sp|P25777|ORYB_ORYSA Oryzain beta chain precursor
Length = 471
Score = 43.5 bits (101), Expect = 2e-04
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +3
Query: 177 DKNNCPDGGQCA---GLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGY 317
D +CP G C G + CL++ GCCP CC D +CC P Y
Sbjct: 387 DNFSCPAGSTCCCAFGFRNLCLVW----GCCPVEGATCCKDHASCCPPDY 432
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,941,073
Number of Sequences: 369166
Number of extensions: 1110055
Number of successful extensions: 3660
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3606
length of database: 68,354,980
effective HSP length: 99
effective length of database: 50,066,215
effective search space used: 2052714815
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)