Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_026_J04
(883 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 421 e-117
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 421 e-117
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 420 e-117
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 420 e-117
sp|Q24789|HSP70_ECHGR Heat shock cognate 70 kDa protein (HS... 419 e-117
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 418 e-117
sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A 416 e-116
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 416 e-116
sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (... 414 e-115
sp|P08106|HSP70_CHICK Heat shock 70 kDa protein (HSP70) 414 e-115
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 421 bits (1082), Expect = e-117
Identities = 211/294 (71%), Positives = 240/294 (81%)
Frame = +1
Query: 1 KALRDAKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXX 180
KALRDAKLDK+ IH+IVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 319 KALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 378
Query: 181 ILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFSTYSDNQPGV 360
ILSGDKSE VQD GIETAGGVMT LIKRNTTIPTKQTQ F+TYSDNQPGV
Sbjct: 379 ILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGV 438
Query: 361 LIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAIEKGTGKE 540
LIQV+EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA++K TGKE
Sbjct: 439 LIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKE 498
Query: 541 NKITITNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQMKSTIEDEKL 720
NKITITNDKGRLSK+DIERMV ++ +KN LESYA+ MK+T+EDEKL
Sbjct: 499 NKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKL 558
Query: 721 KDKISESDRKQIVDRCQEAISWLEKNQQATKEEFDYHYKDLEKLCNPIMTKMYQ 882
+ KI++ D+++I+D+C E ISWL+KNQ A KEEF++ K+LEK+CNPI+TK+YQ
Sbjct: 559 QGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 421 bits (1082), Expect = e-117
Identities = 211/294 (71%), Positives = 240/294 (81%)
Frame = +1
Query: 1 KALRDAKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXX 180
KALRDAKLDK+ IH+IVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 319 KALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 378
Query: 181 ILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFSTYSDNQPGV 360
ILSGDKSE VQD GIETAGGVMT LIKRNTTIPTKQTQ F+TYSDNQPGV
Sbjct: 379 ILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGV 438
Query: 361 LIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAIEKGTGKE 540
LIQV+EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA++K TGKE
Sbjct: 439 LIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKE 498
Query: 541 NKITITNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQMKSTIEDEKL 720
NKITITNDKGRLSK+DIERMV ++ +KN LESYA+ MK+T+EDEKL
Sbjct: 499 NKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKL 558
Query: 721 KDKISESDRKQIVDRCQEAISWLEKNQQATKEEFDYHYKDLEKLCNPIMTKMYQ 882
+ KI++ D+++I+D+C E ISWL+KNQ A KEEF++ K+LEK+CNPI+TK+YQ
Sbjct: 559 QGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 420 bits (1079), Expect = e-117
Identities = 210/294 (71%), Positives = 240/294 (81%)
Frame = +1
Query: 1 KALRDAKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXX 180
KALRDAKLDK+ IH+IVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 319 KALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 378
Query: 181 ILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFSTYSDNQPGV 360
ILSGDKSE VQD GIETAGGVMT LIKRNTTIPTKQTQ F+TYSDNQPGV
Sbjct: 379 ILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGV 438
Query: 361 LIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAIEKGTGKE 540
LIQV+EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA++K TGKE
Sbjct: 439 LIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKE 498
Query: 541 NKITITNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQMKSTIEDEKL 720
NKITITNDKGRLSK+DIERMV ++ +KN LESYA+ MK+T+EDEKL
Sbjct: 499 NKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKL 558
Query: 721 KDKISESDRKQIVDRCQEAISWLEKNQQATKEEFDYHYKDLEKLCNPIMTKMYQ 882
+ KI++ D+++I+D+C E I+WL+KNQ A KEEF++ K+LEK+CNPI+TK+YQ
Sbjct: 559 QGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 420 bits (1079), Expect = e-117
Identities = 211/294 (71%), Positives = 238/294 (80%)
Frame = +1
Query: 1 KALRDAKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXX 180
KALRDAK+DK IH+IVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 319 KALRDAKMDKAQIHDIVLVGGSTRIPKIQKLLQDYFNGKELNKSINPDEAVAYGAAVQAA 378
Query: 181 ILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFSTYSDNQPGV 360
ILSGDKSE VQD GIETAGGVMT LIKRNTTIPTKQTQ F+TYSDNQPGV
Sbjct: 379 ILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGV 438
Query: 361 LIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAIEKGTGKE 540
LIQV+EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGI+NVSA++K TGKE
Sbjct: 439 LIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAVDKSTGKE 498
Query: 541 NKITITNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQMKSTIEDEKL 720
NKITITNDKGRLSK+DIERMV ++ AKN LESYA+ MKST+EDEKL
Sbjct: 499 NKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKL 558
Query: 721 KDKISESDRKQIVDRCQEAISWLEKNQQATKEEFDYHYKDLEKLCNPIMTKMYQ 882
K KIS+ D+++I+D+C E I WL+KNQ A +EEF++ K+LEK+CNPI+TK+YQ
Sbjct: 559 KGKISDEDKQKILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCNPIITKLYQ 612
>sp|Q24789|HSP70_ECHGR Heat shock cognate 70 kDa protein (HSP70)
Length = 665
Score = 419 bits (1076), Expect = e-117
Identities = 207/294 (70%), Positives = 239/294 (81%)
Frame = +1
Query: 1 KALRDAKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXX 180
KALRDAKLDK A+HEIVLVGGSTRIPK+QKLLQD FNG+ELNKSINPDE
Sbjct: 321 KALRDAKLDKGAVHEIVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAVQAA 380
Query: 181 ILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFSTYSDNQPGV 360
IL+GDKSEAVQD G+ETAGGVMTALIKRNTTIPTKQTQ F+TYSDNQPGV
Sbjct: 381 ILTGDKSEAVQDLLLLDVAPLSLGLETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGV 440
Query: 361 LIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAIEKGTGKE 540
LIQV+EGERAM +DNNLLGKFELSGIPP PRGVPQIEVTFDIDANGILNVSA++K TGK+
Sbjct: 441 LIQVYEGERAMKRDNNLLGKFELSGIPPGPRGVPQIEVTFDIDANGILNVSAVDKSTGKQ 500
Query: 541 NKITITNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQMKSTIEDEKL 720
NKITIT DKGRLSK++IERMVN R+ AKN LESYA+ MKST+EDEK+
Sbjct: 501 NKITITRDKGRLSKEEIERMVNDAEKFKQEDEKQRDRVAAKNGLESYAFSMKSTVEDEKV 560
Query: 721 KDKISESDRKQIVDRCQEAISWLEKNQQATKEEFDYHYKDLEKLCNPIMTKMYQ 882
K+KI ESDR++I+++C+E + WL+ NQQA KEE+++ K+LE +CNPI+ KMYQ
Sbjct: 561 KEKIGESDRRRIMEKCEETVKWLDGNQQAEKEEYEHRQKELESVCNPIIAKMYQ 614
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 418 bits (1075), Expect = e-117
Identities = 209/294 (71%), Positives = 240/294 (81%)
Frame = +1
Query: 1 KALRDAKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXX 180
KALRDAKLDK+ IH+IVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 319 KALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 378
Query: 181 ILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFSTYSDNQPGV 360
ILSGDKSE VQD GIETAGGVMT LIKRNTTIPTKQTQ F+TYSDNQPGV
Sbjct: 379 ILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGV 438
Query: 361 LIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAIEKGTGKE 540
LIQV+EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA++K TGKE
Sbjct: 439 LIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKE 498
Query: 541 NKITITNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQMKSTIEDEKL 720
NKITITNDKGRLSK+DIERMV ++ +KN L+SYA+ MK+T+EDEKL
Sbjct: 499 NKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLKSYAFNMKATVEDEKL 558
Query: 721 KDKISESDRKQIVDRCQEAISWLEKNQQATKEEFDYHYKDLEKLCNPIMTKMYQ 882
+ KI++ D+++I+D+C E I+WL+KNQ A KEEF++ K+LEK+CNPI+TK+YQ
Sbjct: 559 QGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A
Length = 640
Score = 416 bits (1070), Expect = e-116
Identities = 212/294 (72%), Positives = 235/294 (79%)
Frame = +1
Query: 1 KALRDAKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXX 180
K+LRDAK+DK+ +H+IVLVGGSTRIPK+QKLL DLF+GKELNKSINPDE
Sbjct: 320 KSLRDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAA 379
Query: 181 ILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFSTYSDNQPGV 360
ILSGDKSEAVQD GIETAGGVMTALIKRNTTIPTK Q F+TYSDNQPGV
Sbjct: 380 ILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGV 439
Query: 361 LIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAIEKGTGKE 540
LIQV+EGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSA +K TGK+
Sbjct: 440 LIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQ 499
Query: 541 NKITITNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQMKSTIEDEKL 720
NKITITNDKGRLSKDDIERMVN RIGAKN LESYA+ +K TIEDEKL
Sbjct: 500 NKITITNDKGRLSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKL 559
Query: 721 KDKISESDRKQIVDRCQEAISWLEKNQQATKEEFDYHYKDLEKLCNPIMTKMYQ 882
KDKIS D+K+I D+C E + WL+ NQ A KEEF++ KDLE L NPI++K+YQ
Sbjct: 560 KDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQ 613
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 416 bits (1069), Expect = e-116
Identities = 207/294 (70%), Positives = 237/294 (80%)
Frame = +1
Query: 1 KALRDAKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXX 180
K+LRDAK+DK +H+IVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 319 KSLRDAKMDKAQVHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 378
Query: 181 ILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFSTYSDNQPGV 360
ILSGDKSE VQD GIETAGGVMT LIKRNTTIPTKQTQ F+TYSDNQPGV
Sbjct: 379 ILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGV 438
Query: 361 LIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAIEKGTGKE 540
LIQV+EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGI+NVSA +K TGKE
Sbjct: 439 LIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAADKSTGKE 498
Query: 541 NKITITNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQMKSTIEDEKL 720
NKITITNDKGRLSK+DIERMV ++ +KN LESYA+ MKST+EDEKL
Sbjct: 499 NKITITNDKGRLSKEDIERMVQEAEKYKCEDDVQRDKVSSKNSLESYAFNMKSTVEDEKL 558
Query: 721 KDKISESDRKQIVDRCQEAISWLEKNQQATKEEFDYHYKDLEKLCNPIMTKMYQ 882
+ KIS+ D+ +I+++C E I WL+KNQ A KEE+++H K+LEK+CNPI+TK+YQ
Sbjct: 559 QGKISDEDKTKILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQ 612
>sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (Hsc 70-4)
Length = 652
Score = 414 bits (1065), Expect = e-115
Identities = 209/294 (71%), Positives = 235/294 (79%)
Frame = +1
Query: 1 KALRDAKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXX 180
K+LRDAK+DK+ IH+IVLVGGSTRIPK+QKLLQD FNGKELNKSINPDE
Sbjct: 319 KSLRDAKMDKSQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 378
Query: 181 ILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFSTYSDNQPGV 360
IL GDKSE VQD GIETAGGVMT LIKRNTTIPTKQTQ F+TYSDNQPGV
Sbjct: 379 ILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQTFTTYSDNQPGV 438
Query: 361 LIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAIEKGTGKE 540
LIQVFEGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA+EK T KE
Sbjct: 439 LIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVEKSTNKE 498
Query: 541 NKITITNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQMKSTIEDEKL 720
NKITITNDKGRLSK++IERMVN I AKN LESY + MKST+EDEKL
Sbjct: 499 NKITITNDKGRLSKEEIERMVNEAEKYRNEDEKQKETIQAKNALESYCFNMKSTMEDEKL 558
Query: 721 KDKISESDRKQIVDRCQEAISWLEKNQQATKEEFDYHYKDLEKLCNPIMTKMYQ 882
KDKIS+SD++ I+D+C + I WL+ NQ A KEE+++ K+LE +CNPI+TK+YQ
Sbjct: 559 KDKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKLYQ 612
>sp|P08106|HSP70_CHICK Heat shock 70 kDa protein (HSP70)
Length = 634
Score = 414 bits (1064), Expect = e-115
Identities = 210/294 (71%), Positives = 235/294 (79%)
Frame = +1
Query: 1 KALRDAKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXX 180
KALRDAKLDK I EIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 322 KALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 381
Query: 181 ILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFSTYSDNQPGV 360
IL GDKSE VQD GIETAGGVMTALIKRNTTIPTKQTQ F+TYSDNQ V
Sbjct: 382 ILMGDKSENVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQSSV 441
Query: 361 LIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAIEKGTGKE 540
L+QV+EGERAMTKDNNLLGKF+L+GIPPAPRGVPQIEVTFDIDANGILNVSA++K TGKE
Sbjct: 442 LVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKE 501
Query: 541 NKITITNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQMKSTIEDEKL 720
NKITITNDKGRLSKDDI+RMV R+GAKN LESY Y MK T+EDEKL
Sbjct: 502 NKITITNDKGRLSKDDIDRMVQEAEKYKAEDEANRDRVGAKNSLESYTYNMKQTVEDEKL 561
Query: 721 KDKISESDRKQIVDRCQEAISWLEKNQQATKEEFDYHYKDLEKLCNPIMTKMYQ 882
K KIS+ D+++++D+CQE IS L++NQ A KEE+++ K+LEKLCNPI+TK+YQ
Sbjct: 562 KGKISDQDKQKVLDKCQEVISSLDRNQMAEKEEYEHKQKELEKLCNPIVTKLYQ 615
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.312 0.132 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,967,574
Number of Sequences: 369166
Number of extensions: 1692734
Number of successful extensions: 5164
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4543
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8790245790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)