Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_026_H08
(915 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P48605|TCPG_DROME T-complex protein 1, gamma subunit (TC... 367 e-101
sp|P50143|TCPG_XENLA T-complex protein 1, gamma subunit (TC... 358 1e-98
sp|P49368|TCPG_HUMAN T-complex protein 1, gamma subunit (TC... 349 7e-96
sp|P80318|TCPG_MOUSE T-complex protein 1, gamma subunit (TC... 349 7e-96
sp|Q5NVF9|TCPG_PONPY T-complex protein 1, gamma subunit (TC... 348 2e-95
sp|O74341|TCPG_SCHPO T-complex protein 1, gamma subunit (TC... 344 2e-94
sp|O00782|TCPG_OXYGR T-complex protein 1, gamma subunit (TC... 329 6e-90
sp|Q9LKI7|TCPG_THAWE T-complex protein 1, gamma subunit (TC... 323 5e-88
sp|P54408|TCPG_TETPY T-complex protein 1, gamma subunit (TC... 322 1e-87
sp|P39077|TCPG_YEAST T-complex protein 1, gamma subunit (TC... 316 5e-86
>sp|P48605|TCPG_DROME T-complex protein 1, gamma subunit (TCP-1-gamma) (CCT-gamma)
Length = 544
Score = 367 bits (943), Expect = e-101
Identities = 179/296 (60%), Positives = 232/296 (78%)
Frame = +3
Query: 3 EDTLEYMKNDCSVTVDTSNESEMVKIVKSCLGTKFISKWADMACKISLEAVKRVTIIQDG 182
ED + ++++ S+ +D ++++M +VK+C+GTKFI KW+D+A KI+L+AV+ VT+ ++G
Sbjct: 132 EDIVGHLQSQLSIQLDVKDKAKMADVVKACVGTKFIGKWSDLAVKIALDAVETVTLSENG 191
Query: 183 RKEIDIKRFARIEKIPGGAIEDCEVLDGVMFNKDPIHSRMRKRIENPRILLLDCNLEYKK 362
R E+DIKR+A++EKIPGGAIE+ VL GVM NKD H +MR+ IENPRI+LLDC+LEYKK
Sbjct: 192 RLEVDIKRYAKVEKIPGGAIEESCVLKGVMINKDVTHPKMRRLIENPRIVLLDCSLEYKK 251
Query: 363 GESQTAIEFVKELDMYRALKXXXXXXXXXXXXXXRFKPDVVITEKSVSDYAQHFLIKADI 542
GESQT +E + E D R L+ KPD+V TEK VSD AQH+L+KA I
Sbjct: 252 GESQTNVEIIGEQDFTRMLQIEEEFVQRICADIIAVKPDLVFTEKGVSDLAQHYLLKAGI 311
Query: 543 TVIRRIRKPDQARLARACGATIVSRTEEIKEEDIGTGAGLFEVRTIGDEYFSYVTKCKNP 722
T IRR+RK D R+ARACGATIV+RTEE+ E+D+GTGAGLFEV+ IGDEYF++VT+CK P
Sbjct: 312 TAIRRLRKTDNLRIARACGATIVNRTEELTEKDVGTGAGLFEVKKIGDEYFTFVTECKEP 371
Query: 723 KACTIVLRGASKDILNELERNLQDAMNVARNVLMEERLVPGGGAVEMAVSCYLKEK 890
KACTI+LRGASKDILNE ERNLQDA++VARN+++E RLV GGGAVEMA S L K
Sbjct: 372 KACTILLRGASKDILNETERNLQDALHVARNLVLEPRLVAGGGAVEMAASQLLTRK 427
>sp|P50143|TCPG_XENLA T-complex protein 1, gamma subunit (TCP-1-gamma) (CCT-gamma)
Length = 547
Score = 358 bits (919), Expect = 1e-98
Identities = 178/303 (58%), Positives = 230/303 (75%)
Frame = +3
Query: 3 EDTLEYMKNDCSVTVDTSNESEMVKIVKSCLGTKFISKWADMACKISLEAVKRVTIIQDG 182
+D + +K + S VDT++ M+KI+ S + TK I WADMAC I+L+AVK V + ++G
Sbjct: 130 DDMVNTLK-EISTPVDTNDRELMLKIINSAINTKAIKLWADMACGIALDAVKTVELEENG 188
Query: 183 RKEIDIKRFARIEKIPGGAIEDCEVLDGVMFNKDPIHSRMRKRIENPRILLLDCNLEYKK 362
RKEIDIK++A++EKIPGG IED VL GVM NKD H +MR+ I+NPRI+LLDC+LEYKK
Sbjct: 189 RKEIDIKKYAKVEKIPGGIIEDSCVLRGVMVNKDVTHPKMRRLIKNPRIILLDCSLEYKK 248
Query: 363 GESQTAIEFVKELDMYRALKXXXXXXXXXXXXXXRFKPDVVITEKSVSDYAQHFLIKADI 542
GESQT IE +E D R L+ R KPDVVITEK +SD AQH+L+KA+I
Sbjct: 249 GESQTEIEITREEDFARILQMEEEYIQQVCEDIIRLKPDVVITEKGISDLAQHYLVKANI 308
Query: 543 TVIRRIRKPDQARLARACGATIVSRTEEIKEEDIGTGAGLFEVRTIGDEYFSYVTKCKNP 722
T +RR+RK D R+ARACGA I SRT+E++EED+GTGAGLFE++ IGDEYF+++T CK+P
Sbjct: 309 TAVRRVRKTDNNRIARACGARIASRTDELREEDVGTGAGLFEIKKIGDEYFTFITDCKDP 368
Query: 723 KACTIVLRGASKDILNELERNLQDAMNVARNVLMEERLVPGGGAVEMAVSCYLKEKAKSK 902
KACTIVLRGASK+IL E+ERNLQDAM V RNV+++ LVPGGGA EM+V+ L EK+K+
Sbjct: 369 KACTIVLRGASKEILAEVERNLQDAMQVCRNVVIDPYLVPGGGASEMSVAHILTEKSKTM 428
Query: 903 LNI 911
+
Sbjct: 429 TGV 431
>sp|P49368|TCPG_HUMAN T-complex protein 1, gamma subunit (TCP-1-gamma) (CCT-gamma) (hTRiC5)
Length = 545
Score = 349 bits (895), Expect = 7e-96
Identities = 175/303 (57%), Positives = 228/303 (75%)
Frame = +3
Query: 3 EDTLEYMKNDCSVTVDTSNESEMVKIVKSCLGTKFISKWADMACKISLEAVKRVTIIQDG 182
+D + +K S+ VD S+ M+ I+ S + TK IS+W+ +AC I+L+AVK V ++G
Sbjct: 131 DDMISTLKK-ISIPVDISDSDMMLNIINSSITTKAISRWSSLACNIALDAVKMVQFEENG 189
Query: 183 RKEIDIKRFARIEKIPGGAIEDCEVLDGVMFNKDPIHSRMRKRIENPRILLLDCNLEYKK 362
RKEIDIK++AR+EKIPGG IED VL GVM NKD H RMR+ I+NPRI+LLD +LEYKK
Sbjct: 190 RKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKK 249
Query: 363 GESQTAIEFVKELDMYRALKXXXXXXXXXXXXXXRFKPDVVITEKSVSDYAQHFLIKADI 542
GESQT IE +E D R L+ + KPDVVITEK +SD AQH+L++A+I
Sbjct: 250 GESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANI 309
Query: 543 TVIRRIRKPDQARLARACGATIVSRTEEIKEEDIGTGAGLFEVRTIGDEYFSYVTKCKNP 722
T IRR+RK D R+ARACGA IVSR EE++E+D+GTGAGL E++ IGDEYF+++T CK+P
Sbjct: 310 TAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDP 369
Query: 723 KACTIVLRGASKDILNELERNLQDAMNVARNVLMEERLVPGGGAVEMAVSCYLKEKAKSK 902
KACTI+LRGASK+IL+E+ERNLQDAM V RNVL++ +LVPGGGA EMAV+ L EK+K+
Sbjct: 370 KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAM 429
Query: 903 LNI 911
+
Sbjct: 430 TGV 432
>sp|P80318|TCPG_MOUSE T-complex protein 1, gamma subunit (TCP-1-gamma) (CCT-gamma)
(Matricin) (mTRiC-P5)
Length = 545
Score = 349 bits (895), Expect = 7e-96
Identities = 174/303 (57%), Positives = 227/303 (74%)
Frame = +3
Query: 3 EDTLEYMKNDCSVTVDTSNESEMVKIVKSCLGTKFISKWADMACKISLEAVKRVTIIQDG 182
+D + +K S VD +N M+ I+ S + TK IS+W+ +AC I+L+AVK V ++G
Sbjct: 131 DDMISTLKK-ISTPVDVNNREMMLSIINSSITTKVISRWSSLACNIALDAVKTVQFEENG 189
Query: 183 RKEIDIKRFARIEKIPGGAIEDCEVLDGVMFNKDPIHSRMRKRIENPRILLLDCNLEYKK 362
RKEIDIK++AR+EKIPGG IED VL GVM NKD H RMR+ I+NPRI+LLD +LEYKK
Sbjct: 190 RKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKK 249
Query: 363 GESQTAIEFVKELDMYRALKXXXXXXXXXXXXXXRFKPDVVITEKSVSDYAQHFLIKADI 542
GESQT IE +E D R L+ + KPDVVITEK +SD AQH+L++A++
Sbjct: 250 GESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANV 309
Query: 543 TVIRRIRKPDQARLARACGATIVSRTEEIKEEDIGTGAGLFEVRTIGDEYFSYVTKCKNP 722
T IRR+RK D R+ARACGA IVSR EE++E+D+GTGAGL E++ IGDEYF+++T CK+P
Sbjct: 310 TAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDP 369
Query: 723 KACTIVLRGASKDILNELERNLQDAMNVARNVLMEERLVPGGGAVEMAVSCYLKEKAKSK 902
KACTI+LRGASK+IL+E+ERNLQDAM V RNVL++ +LVPGGGA EMAV+ L EK+K+
Sbjct: 370 KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAM 429
Query: 903 LNI 911
+
Sbjct: 430 TGV 432
>sp|Q5NVF9|TCPG_PONPY T-complex protein 1, gamma subunit (TCP-1-gamma) (CCT-gamma)
Length = 545
Score = 348 bits (892), Expect = 2e-95
Identities = 174/303 (57%), Positives = 228/303 (75%)
Frame = +3
Query: 3 EDTLEYMKNDCSVTVDTSNESEMVKIVKSCLGTKFISKWADMACKISLEAVKRVTIIQDG 182
+D + +K S+ VD ++ M+ I+ S + TK IS+W+ +AC I+L+AVK V ++G
Sbjct: 131 DDMISTLKK-ISIPVDINDSDMMLNIINSSITTKAISRWSSLACNIALDAVKMVQFEENG 189
Query: 183 RKEIDIKRFARIEKIPGGAIEDCEVLDGVMFNKDPIHSRMRKRIENPRILLLDCNLEYKK 362
RKEIDIK++AR+EKIPGG IED VL GVM NKD H RMR+ I+NPRI+LLD +LEYKK
Sbjct: 190 RKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKK 249
Query: 363 GESQTAIEFVKELDMYRALKXXXXXXXXXXXXXXRFKPDVVITEKSVSDYAQHFLIKADI 542
GESQT IE +E D R L+ + KPDVVITEK +SD AQH+L++A+I
Sbjct: 250 GESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANI 309
Query: 543 TVIRRIRKPDQARLARACGATIVSRTEEIKEEDIGTGAGLFEVRTIGDEYFSYVTKCKNP 722
T IRR+RK D R+ARACGA IVSR EE++E+D+GTGAGL E++ IGDEYF+++T CK+P
Sbjct: 310 TAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDP 369
Query: 723 KACTIVLRGASKDILNELERNLQDAMNVARNVLMEERLVPGGGAVEMAVSCYLKEKAKSK 902
KACTI+LRGASK+IL+E+ERNLQDAM V RNVL++ +LVPGGGA EMAV+ L EK+K+
Sbjct: 370 KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAM 429
Query: 903 LNI 911
+
Sbjct: 430 TGV 432
>sp|O74341|TCPG_SCHPO T-complex protein 1, gamma subunit (TCP-1-gamma) (CCT-gamma)
Length = 528
Score = 344 bits (883), Expect = 2e-94
Identities = 167/299 (55%), Positives = 222/299 (74%)
Frame = +3
Query: 3 EDTLEYMKNDCSVTVDTSNESEMVKIVKSCLGTKFISKWADMACKISLEAVKRVTIIQDG 182
ED L + ++ ++ V+ + +EM +++++C+GTK +++W+D+ C ++L AV+ V +G
Sbjct: 129 EDALSII-DEITLPVNVDDNAEMFRLIRTCIGTKLVARWSDLMCHLALRAVRTVASTSNG 187
Query: 183 RKEIDIKRFARIEKIPGGAIEDCEVLDGVMFNKDPIHSRMRKRIENPRILLLDCNLEYKK 362
R EIDIKR+AR+EK+PGG IE VLDGVM NKD H +MR+RIENPRI+LLDC LEY+K
Sbjct: 188 RMEIDIKRYARVEKVPGGEIESSCVLDGVMLNKDVTHPKMRRRIENPRIVLLDCPLEYRK 247
Query: 363 GESQTAIEFVKELDMYRALKXXXXXXXXXXXXXXRFKPDVVITEKSVSDYAQHFLIKADI 542
GESQT IE K+ D R L+ KPD+VITEK VSD AQH+L+KA+I
Sbjct: 248 GESQTNIEISKDTDWNRILEIEEEQVKRMCDYIIAVKPDLVITEKGVSDLAQHYLLKANI 307
Query: 543 TVIRRIRKPDQARLARACGATIVSRTEEIKEEDIGTGAGLFEVRTIGDEYFSYVTKCKNP 722
T +RR RK D R+ARACGA IV+R E+++E+D+GTG GLF + +GDEY++++T CKNP
Sbjct: 308 TALRRTRKSDNNRIARACGANIVNRLEDLREKDVGTGCGLFYIDKLGDEYYTFLTGCKNP 367
Query: 723 KACTIVLRGASKDILNELERNLQDAMNVARNVLMEERLVPGGGAVEMAVSCYLKEKAKS 899
KACTI+LRG SKDI+NE+ERNLQDAM VARNV +L PGGGA EMAVS L EKA+S
Sbjct: 368 KACTILLRGPSKDIINEVERNLQDAMAVARNVFFHPKLSPGGGATEMAVSVRLAEKARS 426
>sp|O00782|TCPG_OXYGR T-complex protein 1, gamma subunit (TCP-1-gamma) (CCT-gamma)
(Chaperonin subunit CCTV gamma)
Length = 559
Score = 329 bits (844), Expect = 6e-90
Identities = 165/283 (58%), Positives = 211/283 (74%), Gaps = 2/283 (0%)
Frame = +3
Query: 45 VDTSNESEMVKIVKSCLGTKFISKWADMACKISLEAVKRVTIIQDGRKEIDIKRFARIEK 224
+D NE+++ KIV SC+GTKF SKW ++ ++++AVK V + EID+KR+A++EK
Sbjct: 144 IDIENENDLQKIVSSCIGTKFSSKWGNLIVDLAVKAVKSVYKKEGDYVEIDVKRYAKVEK 203
Query: 225 IPGGAIEDCEVLDGVMFNKDPIHSRMRKRIENPRILLLDCNLEYKKGESQTAIEFVKELD 404
IPGG +E+ VLDGVMFNKD H MR+ IENPR++LLDC LEYKKGES T +EF KE D
Sbjct: 204 IPGGLLEESVVLDGVMFNKDVTHPGMRRYIENPRVVLLDCPLEYKKGESMTNMEFTKEED 263
Query: 405 MYRALKXXXXXXXXXXXXXX-RFKPDVVITEKSVSDYAQHFLIK-ADITVIRRIRKPDQA 578
+AL R KPDVVITEK VSD AQHFL+K + TVIRRIRK D
Sbjct: 264 FKKALMMEEEEVKKMCAEDILRVKPDVVITEKGVSDTAQHFLLKYGNCTVIRRIRKTDNN 323
Query: 579 RLARACGATIVSRTEEIKEEDIGTGAGLFEVRTIGDEYFSYVTKCKNPKACTIVLRGASK 758
R+AR GATI +R EE++E D+GT GLFE++ IGDEYFS++TKC+NPKAC+I+LRGASK
Sbjct: 324 RIARVTGATIANRPEELQESDVGTKCGLFEIKKIGDEYFSFMTKCENPKACSILLRGASK 383
Query: 759 DILNELERNLQDAMNVARNVLMEERLVPGGGAVEMAVSCYLKE 887
D+LNE+ERNL DA+ VARNV++ +LVPGGGA+EM ++C L E
Sbjct: 384 DVLNEIERNLHDALGVARNVMVNPKLVPGGGAIEMELACRLME 426
>sp|Q9LKI7|TCPG_THAWE T-complex protein 1, gamma subunit (TCP-1-gamma) (CCT-gamma)
Length = 558
Score = 323 bits (827), Expect = 5e-88
Identities = 169/305 (55%), Positives = 212/305 (69%), Gaps = 15/305 (4%)
Frame = +3
Query: 36 SVTVDTSNESEMVKIVKSCLGTKFISKWADMACKISLEAVKRVTIIQDGRK--------- 188
++ VD + + +V+SC+G KF S+W D+ ++L+AV +T+ ++ R
Sbjct: 143 ALVVDVHDSERVKSLVQSCIGAKFSSRWNDIMIDMALKAV--LTVSRESRTPSFTPEAND 200
Query: 189 ------EIDIKRFARIEKIPGGAIEDCEVLDGVMFNKDPIHSRMRKRIENPRILLLDCNL 350
E+DIKR+A++EKIPGG I DC VL GVMFNKD HS+MR+RIENPRILLLD L
Sbjct: 201 VYAQKMEVDIKRYAKVEKIPGGEISDCAVLSGVMFNKDVTHSKMRRRIENPRILLLDTPL 260
Query: 351 EYKKGESQTAIEFVKELDMYRALKXXXXXXXXXXXXXXRFKPDVVITEKSVSDYAQHFLI 530
EYKKGESQT +E E D LK FKPD+VITEK VSD AQH+
Sbjct: 261 EYKKGESQTNVEITDEEDWNTLLKMEEEYVENMCMEIIAFKPDIVITEKGVSDLAQHYFA 320
Query: 531 KADITVIRRIRKPDQARLARACGATIVSRTEEIKEEDIGTGAGLFEVRTIGDEYFSYVTK 710
KA+IT RR+RK D R+ARA GATIVSRT+EI+E DIGTG GLFE+R IG+EYF++ +
Sbjct: 321 KANITAFRRLRKTDNNRVARATGATIVSRTDEIRESDIGTGCGLFEMRKIGEEYFAFFEE 380
Query: 711 CKNPKACTIVLRGASKDILNELERNLQDAMNVARNVLMEERLVPGGGAVEMAVSCYLKEK 890
CK+PKACTI+LRG SKD+LNE+ERNL DAM V RNV+ + RL+PGGGA EMAVS L+ K
Sbjct: 381 CKDPKACTIILRGGSKDVLNEIERNLTDAMQVVRNVVFDPRLLPGGGATEMAVSVGLR-K 439
Query: 891 AKSKL 905
A KL
Sbjct: 440 AGLKL 444
>sp|P54408|TCPG_TETPY T-complex protein 1, gamma subunit (TCP-1-gamma) (CCT-gamma)
Length = 559
Score = 322 bits (824), Expect = 1e-87
Identities = 155/298 (52%), Positives = 221/298 (74%), Gaps = 3/298 (1%)
Frame = +3
Query: 30 DCSVTVDTSNESEMVKIVKSCLGTKFISKWADMACKISLEAVKRVTIIQDGRKE---IDI 200
+ +V +D +N+ ++ K + SC+GTKF S+W + ++L+AV+ TI++ G + ++I
Sbjct: 141 ELAVPIDVNNDDQVNKALSSCIGTKFTSRWGKLITDLALKAVR--TIMRGGNLQKLNLEI 198
Query: 201 KRFARIEKIPGGAIEDCEVLDGVMFNKDPIHSRMRKRIENPRILLLDCNLEYKKGESQTA 380
KR+A++EKIPGG +ED VLDGVMFNKD H +MR+ I+NPR++LLDC LEYKKGES T
Sbjct: 199 KRYAKVEKIPGGTLEDSVVLDGVMFNKDITHPKMRRFIKNPRVILLDCPLEYKKGESMTN 258
Query: 381 IEFVKELDMYRALKXXXXXXXXXXXXXXRFKPDVVITEKSVSDYAQHFLIKADITVIRRI 560
+E +KE DM AL+ + KPDVVITEK VSD AQH+L+K +++VIRR+
Sbjct: 259 LEMMKETDMTDALQQEMEELALMCNDILKHKPDVVITEKGVSDLAQHYLLKQNVSVIRRV 318
Query: 561 RKPDQARLARACGATIVSRTEEIKEEDIGTGAGLFEVRTIGDEYFSYVTKCKNPKACTIV 740
RK D R++R GATIV+R EEI+E D+G GLFEV+ IGDEYF+++T+C+NP+AC+I+
Sbjct: 319 RKTDNNRISRVSGATIVNRPEEIQESDVGKKCGLFEVKLIGDEYFTFMTECENPEACSII 378
Query: 741 LRGASKDILNELERNLQDAMNVARNVLMEERLVPGGGAVEMAVSCYLKEKAKSKLNIH 914
LRGASKD+LNE+ERNL D + VA+N+ + +LVPGGGA+EM VS +L++ + S +H
Sbjct: 379 LRGASKDVLNEMERNLHDCLAVAKNIFVNPKLVPGGGAIEMEVSSHLEKISSSIEGLH 436
>sp|P39077|TCPG_YEAST T-complex protein 1, gamma subunit (TCP-1-gamma) (CCT-gamma)
Length = 534
Score = 316 bits (810), Expect = 5e-86
Identities = 161/303 (53%), Positives = 210/303 (69%), Gaps = 6/303 (1%)
Frame = +3
Query: 6 DTLEYMKNDCSVTVDTSNESEMVKIVKSCLGTKFISKWADMACKISLEAVKRV------T 167
D LE +K S VD N++ M K++++ +GTK++ W++ C+++L+AVK V T
Sbjct: 131 DALEVIKQ-VSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQT 189
Query: 168 IIQDGRKEIDIKRFARIEKIPGGAIEDCEVLDGVMFNKDPIHSRMRKRIENPRILLLDCN 347
+ + EIDIKR+ R+EKIPGG + D VL GV+ NKD +H +M + IENPR++LLDC
Sbjct: 190 VEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPKMSRHIENPRVVLLDCP 249
Query: 348 LEYKKGESQTAIEFVKELDMYRALKXXXXXXXXXXXXXXRFKPDVVITEKSVSDYAQHFL 527
LEYKKGESQT IE KE D R L+ +P +VITEK VSD AQH+L
Sbjct: 250 LEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYL 309
Query: 528 IKADITVIRRIRKPDQARLARACGATIVSRTEEIKEEDIGTGAGLFEVRTIGDEYFSYVT 707
+K +V+RR++K D R+AR GATIV+R E++KE D+GT GLF+V IGDEYFS++
Sbjct: 310 LKGGCSVLRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGDEYFSFLD 369
Query: 708 KCKNPKACTIVLRGASKDILNELERNLQDAMNVARNVLMEERLVPGGGAVEMAVSCYLKE 887
CK PKACTI+LRG SKDILNE++RNLQDAM VARNV++ L PGGGA EMAVS L E
Sbjct: 370 NCKEPKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAE 429
Query: 888 KAK 896
KAK
Sbjct: 430 KAK 432
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,302,831
Number of Sequences: 369166
Number of extensions: 1695377
Number of successful extensions: 5302
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5135
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9318621220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)