Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_026_D04
(892 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 294 2e-79
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 292 1e-78
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 291 2e-78
sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathe... 286 5e-77
sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathe... 285 2e-76
sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor 284 2e-76
sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Catheps... 283 5e-76
sp|Q9GLE3|CATK_PIG Cathepsin K precursor 279 9e-75
sp|P61277|CATK_MACMU Cathepsin K precursor >gi|47117667|sp|... 278 1e-74
sp|P43236|CATK_RABIT Cathepsin K precursor (OC-2 protein) 278 2e-74
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 294 bits (753), Expect = 2e-79
Identities = 152/300 (50%), Positives = 191/300 (63%), Gaps = 5/300 (1%)
Frame = +2
Query: 8 TAVPQKFSVNSELNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHT 187
+AVP KF N L+ +W +K T R Y + RR +WE+N+K I+ HN EY GKH
Sbjct: 16 SAVP-KFDQN--LDTKWYQWKATHRRLYGANEEGWRRAVWEKNMKMIELHNGEYSQGKHG 72
Query: 188 YSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVK 367
+++ +N F DMTNEEF+ + +G + + +G + P + LP SVDWR+KGYVTPVK
Sbjct: 73 FTMAMNAFGDMTNEEFR-QMMGCFRNQKFRKGKVFREPLFLD-LPKSVDWRKKGYVTPVK 130
Query: 368 NQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYI 547
NQ+QCGSCW+FSATG+LEGQ FRK +L+S SEQ LVDCS M AF+Y+
Sbjct: 131 NQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYV 190
Query: 548 KDQ-GIESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAI 724
K+ G++SE YPY A D CK P V TGFT + E L AVATVGP+SVA+
Sbjct: 191 KENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAM 250
Query: 725 DAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYG----TQIGKKYWIVKNSWDVTWGES 892
DAGH+SFQ YKSGIY E CS+ LDHGVL VGYG KYW+VKNSW WG +
Sbjct: 251 DAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSN 310
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 292 bits (747), Expect = 1e-78
Identities = 154/299 (51%), Positives = 185/299 (61%), Gaps = 5/299 (1%)
Frame = +2
Query: 5 ITAVPQKFSVNSELNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKH 184
I + KF + LN +W +K T R Y + RR +WE+N+K I+ HN EY GKH
Sbjct: 14 IASAAPKF--DQSLNAQWYQWKATHRRLYGMNEEGWRRAVWEKNMKMIELHNREYSQGKH 71
Query: 185 TYSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPV 364
+++ +N F DMTNEEF+ G K +G + P +P SVDWR+KGYVTPV
Sbjct: 72 GFTMAMNAFGDMTNEEFRQVMNGFQNQKHK-KGKMFQEPL-FAEIPKSVDWREKGYVTPV 129
Query: 365 KNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRY 544
KNQ QCGSCW+FSATG+LEGQ FRK +L+S SEQ LVDCS LMDNAFRY
Sbjct: 130 KNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRY 189
Query: 545 IKDQ-GIESEGDYPYTATD-GTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSV 718
+KD G++SE YPY D TC P TGF D+ Q E L AVAT+GP+SV
Sbjct: 190 VKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDL-PQREKALMKAVATLGPISV 248
Query: 719 AIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGY---GTQIGKKYWIVKNSWDVTWG 886
AIDAGH SFQ YKSGIY + CS+ LDHGVL VGY GT K+WIVKNSW WG
Sbjct: 249 AIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKFWIVKNSWGPEWG 307
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 291 bits (744), Expect = 2e-78
Identities = 150/286 (52%), Positives = 181/286 (63%), Gaps = 5/286 (1%)
Frame = +2
Query: 44 LNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMT 223
L +W +K R Y + RR +WE+N+K I+ HN EY GKH++++ +N F DMT
Sbjct: 25 LEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMT 84
Query: 224 NEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFS 403
+EEF+ G KP +G + P P SVDWR+KGYVTPVKNQ QCGSCW+FS
Sbjct: 85 SEEFRQVMNGFQNRKPR-KGKVFQEPLFYEA-PRSVDWREKGYVTPVKNQGQCGSCWAFS 142
Query: 404 ATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDY 580
ATG+LEGQ FRK RLIS SEQ LVDCS LMD AF+Y++D G++SE Y
Sbjct: 143 ATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESY 202
Query: 581 PYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKS 760
PY AT+ +CK NP V TGF DI Q E L AVATVGP+SVAIDAGH SF YK
Sbjct: 203 PYEATEESCKYNPKYSVANDTGFVDIPKQ-EKALMKAVATVGPISVAIDAGHESFLFYKE 261
Query: 761 GIYNEESCSTTQLDHGVLAVGYGTQI----GKKYWIVKNSWDVTWG 886
GIY E CS+ +DHGVL VGYG + KYW+VKNSW WG
Sbjct: 262 GIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWG 307
>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 286 bits (732), Expect = 5e-77
Identities = 152/291 (52%), Positives = 179/291 (61%), Gaps = 6/291 (2%)
Frame = +2
Query: 32 VNSELNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQF 211
++ L+ W +K T R Y + RR +WE+N K I HN EY GKH + + +N F
Sbjct: 21 LDPNLDAHWHQWKATHRRLYGMNEEEWRRAVWEKNKKIIDLHNQEYSEGKHAFRMAMNAF 80
Query: 212 ADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSC 391
DMTNEEF+ G K +G + P + V P SVDW +KGYVTPVKNQ QCGSC
Sbjct: 81 GDMTNEEFRQVMNGFQNQKHK-KGKLFHEPLLVDV-PKSVDWTKKGYVTPVKNQGQCGSC 138
Query: 392 WSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIES 568
W+FSATG+LEGQ FRK +L+S SEQ LVDCS LMDNAF+YIKD G++S
Sbjct: 139 WAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDS 198
Query: 569 EGDYPYTATD-GTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASF 745
E YPY ATD +C P TGF DI Q E L AVATVGP+SVAIDAGH SF
Sbjct: 199 EESYPYLATDTNSCNYKPECSAANDTGFVDI-PQREKALMKAVATVGPISVAIDAGHTSF 257
Query: 746 QLYKSGIYNEESCSTTQLDHGVLAVGYGTQ----IGKKYWIVKNSWDVTWG 886
Q YKSGIY + CS LDHGVL VGYG + K+WIVKNSW WG
Sbjct: 258 QFYKSGIYYDPDCSCKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWG 308
>sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 339
Score = 285 bits (728), Expect = 2e-76
Identities = 152/306 (49%), Positives = 190/306 (62%), Gaps = 10/306 (3%)
Frame = +2
Query: 2 AITAVPQKFSVNSELNEEWETYKTTFGRKY-DELTDITRRLIWEQNLKYIQKHNLEYDLG 178
A+ A+ Q S + EEW TYK + Y +E+ + R I+ +N I KHN + G
Sbjct: 10 ALVALTQAISPLDLIKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQG 69
Query: 179 KHTYSLGLNQFADMTNEEFKAKYLG-------IMKTKPTLEGSTYMAPENIGVLPASVDW 337
K +Y LGLN++ADM + EFK G +M+ + L G+TY+ P ++ V P SVDW
Sbjct: 70 KVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTV-PKSVDW 128
Query: 338 RQKGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXX 517
R+ G VT VK+Q CGSCW+FS+TG+LEGQ+FRK L+S SEQ LVDCS
Sbjct: 129 REHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNG 188
Query: 518 XLMDNAFRYIKDQG-IESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAV 694
LMDNAFRYIKD G I++E YPY D +C N + I TGF DI +E + AV
Sbjct: 189 GLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCHFNKATIGATDTGFVDIPEGDEEKMKKAV 248
Query: 695 ATVGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYGT-QIGKKYWIVKNSW 871
AT+GPVSVAIDA H SFQLY G+YNE C LDHGVL VGYGT + G YW+VKNSW
Sbjct: 249 ATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSW 308
Query: 872 DVTWGE 889
TWGE
Sbjct: 309 GTTWGE 314
>sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor
Length = 326
Score = 284 bits (727), Expect = 2e-76
Identities = 136/278 (48%), Positives = 178/278 (64%)
Frame = +2
Query: 56 WETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMTNEEF 235
W +K + ++Y+ D RR IWE+N+K+IQ+HNL +DLG TY+LGLNQF DMT EEF
Sbjct: 21 WHQWKRMYNKEYNGADDQHRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEF 80
Query: 236 KAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSATGS 415
KAKYL M + N +P +DWR+ GYVT VK+Q CGSCW+FS TG+
Sbjct: 81 KAKYLTEMSRASDILSHGVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGT 140
Query: 416 LEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQGIESEGDYPYTAT 595
+EGQY + ISFSEQQLVDCS LM+NA++Y+K G+E+E YPYTA
Sbjct: 141 MEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQFGLETESSYPYTAV 200
Query: 596 DGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKSGIYNE 775
+G C+ N V K TG+ + S +E +L N V P +VA+D + F +Y+SGIY
Sbjct: 201 EGQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVDV-ESDFMMYRSGIYQS 259
Query: 776 ESCSTTQLDHGVLAVGYGTQIGKKYWIVKNSWDVTWGE 889
++CS +++H VLAVGYGTQ G YWIVKNSW WGE
Sbjct: 260 QTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGTYWGE 297
>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 283 bits (724), Expect = 5e-76
Identities = 148/291 (50%), Positives = 183/291 (62%), Gaps = 6/291 (2%)
Frame = +2
Query: 32 VNSELNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQF 211
++ L+ +W +K T GR Y + RR +WE+N+K I+ HN EY GKH +S+ +N F
Sbjct: 21 LDQNLDADWYKWKATHGRLYGMNEEGWRRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAF 80
Query: 212 ADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSC 391
DMTNEEF+ G K +G + + V P SVDWR+KGYVT VKNQ QCGSC
Sbjct: 81 GDMTNEEFRQVMNGFQNQKHK-KGKVFHESLVLEV-PKSVDWREKGYVTAVKNQGQCGSC 138
Query: 392 WSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIES 568
W+FSATG+LEGQ FRK +L+S SEQ LVDCS LMDNAF+Y+KD G+++
Sbjct: 139 WAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDT 198
Query: 569 EGDYPYTATD-GTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASF 745
E YPY + +C P TGF DI Q E L AVATVGP+SVAIDAGH+SF
Sbjct: 199 EESYPYLGRETNSCTYKPECSAANDTGFVDI-PQREKALMKAVATVGPISVAIDAGHSSF 257
Query: 746 QLYKSGIYNEESCSTTQLDHGVLAVGYGTQ----IGKKYWIVKNSWDVTWG 886
Q YKSGIY + CS+ LDHGVL VGYG + K+WIVKNSW WG
Sbjct: 258 QFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNSSKFWIVKNSWGPEWG 308
>sp|Q9GLE3|CATK_PIG Cathepsin K precursor
Length = 330
Score = 279 bits (713), Expect = 9e-75
Identities = 143/285 (50%), Positives = 184/285 (64%), Gaps = 4/285 (1%)
Frame = +2
Query: 44 LNEEWETYKTTFGRKYDELTD-ITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADM 220
L+ +WE +K T+ ++Y+ D I+RRLIWE+NLK+I HNLE LG HTY L +N DM
Sbjct: 23 LDTQWELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDM 82
Query: 221 TNEEFKAKYLGIMKTKPTLEGS--TYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCW 394
T+EE K G+ K P+ S T P+ G P S+D+R+KGYVTPVKNQ QCGSCW
Sbjct: 83 TSEEVVQKMTGL-KVPPSHSRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCW 141
Query: 395 SFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYI-KDQGIESE 571
+FS+ G+LEGQ +K +L++ S Q LVDC M NAF+Y+ K++GI+SE
Sbjct: 142 AFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSE 199
Query: 572 GDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQL 751
YPY D C NP+ KC G+ +I NE L AVA VGPVSVAIDA SFQ
Sbjct: 200 DAYPYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQF 259
Query: 752 YKSGIYNEESCSTTQLDHGVLAVGYGTQIGKKYWIVKNSWDVTWG 886
Y G+Y +E+C++ L+H VLAVGYG Q GKK+WI+KNSW WG
Sbjct: 260 YSKGVYYDENCNSDNLNHAVLAVGYGIQKGKKHWIIKNSWGENWG 304
>sp|P61277|CATK_MACMU Cathepsin K precursor
sp|P61276|CATK_MACFA Cathepsin K precursor
Length = 329
Score = 278 bits (712), Expect = 1e-74
Identities = 142/284 (50%), Positives = 180/284 (63%), Gaps = 3/284 (1%)
Frame = +2
Query: 44 LNEEWETYKTTFGRKYDELTD-ITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADM 220
L+ WE +K T ++Y+ D I+RRLIWE+NLKYI HNLE LG HTY L +N DM
Sbjct: 22 LDTHWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDM 81
Query: 221 TNEEFKAKYLGI-MKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWS 397
TNEE K G+ + + T P+ G P SVD+R+KGYVTPVKNQ QCGSCW+
Sbjct: 82 TNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWA 141
Query: 398 FSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYI-KDQGIESEG 574
FS+ G+LEGQ +K +L++ S Q LVDC M NAF+Y+ K++GI+SE
Sbjct: 142 FSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSED 199
Query: 575 DYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLY 754
YPY + +C NP+ KC G+ +I NE L AVA VGPVSVAIDA SFQ Y
Sbjct: 200 AYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFY 259
Query: 755 KSGIYNEESCSTTQLDHGVLAVGYGTQIGKKYWIVKNSWDVTWG 886
G+Y +ESC++ L+H VLAVGYG Q G K+WI+KNSW WG
Sbjct: 260 SKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 303
>sp|P43236|CATK_RABIT Cathepsin K precursor (OC-2 protein)
Length = 329
Score = 278 bits (710), Expect = 2e-74
Identities = 141/285 (49%), Positives = 185/285 (64%), Gaps = 4/285 (1%)
Frame = +2
Query: 44 LNEEWETYKTTFGRKYDELTD-ITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADM 220
L+ +WE +K T+ ++Y+ D I+RRLIWE+NLK+I HNLE LG HTY L +N DM
Sbjct: 22 LDTQWELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDM 81
Query: 221 TNEEFKAKYLGIMKTKPTLEGS--TYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCW 394
T+EE K G+ K P+ S T P+ G P S+D+R+KGYVTPVKNQ QCGSCW
Sbjct: 82 TSEEVVQKMTGL-KVPPSRSHSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCW 140
Query: 395 SFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYI-KDQGIESE 571
+FS+ G+LEGQ +K +L++ S Q LVDC M NAF+Y+ +++GI+SE
Sbjct: 141 AFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSENYGCGGGYMTNAFQYVQRNRGIDSE 198
Query: 572 GDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQL 751
YPY D +C NP+ KC G+ +I NE L AVA VGPVSVAIDA SFQ
Sbjct: 199 DAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQF 258
Query: 752 YKSGIYNEESCSTTQLDHGVLAVGYGTQIGKKYWIVKNSWDVTWG 886
Y G+Y +E+CS+ ++H VLAVGYG Q G K+WI+KNSW +WG
Sbjct: 259 YSKGVYYDENCSSDNVNHAVLAVGYGIQKGNKHWIIKNSWGESWG 303
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,953,443
Number of Sequences: 369166
Number of extensions: 1963371
Number of successful extensions: 6018
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5475
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8934348180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)