Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_026_C20
(846 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q99KI0|ACON_MOUSE Aconitate hydratase, mitochondrial pre... 395 e-110
sp|Q9ER34|ACON_RAT Aconitate hydratase, mitochondrial precu... 394 e-109
sp|P20004|ACON_BOVIN Aconitate hydratase, mitochondrial pre... 394 e-109
sp|Q99798|ACON_HUMAN Aconitate hydratase, mitochondrial pre... 392 e-109
sp|P34455|ACON_CAEEL Probable aconitate hydratase, mitochon... 389 e-108
sp|P16276|ACON_PIG Aconitate hydratase, mitochondrial precu... 387 e-107
sp|P49609|ACON_GRAVE Aconitate hydratase, mitochondrial pre... 375 e-103
sp|P19414|ACON_YEAST Aconitate hydratase, mitochondrial pre... 362 e-100
sp|O13966|ACON_SCHPO Aconitate hydratase, mitochondrial pre... 341 1e-93
sp|P39533|ACON2_YEAST Putative aconitase in PRP21-UBP12 int... 280 3e-75
>sp|Q99KI0|ACON_MOUSE Aconitate hydratase, mitochondrial precursor (Citrate hydro-lyase)
(Aconitase)
Length = 780
Score = 395 bits (1015), Expect = e-110
Identities = 190/275 (69%), Positives = 215/275 (78%)
Frame = +1
Query: 4 LNFNPLVDELTDAKGNKFKLSPPSGDTLPSRGFDAGENTYQKPPTDCGQIQVKVDPKSTR 183
L FNP D LT G KFKL P D LP FD G++TYQ PP D +V V P S R
Sbjct: 505 LKFNPETDFLTGKDGKKFKLEAPDADELPRSDFDPGQDTYQHPPKDSSGQRVDVSPTSQR 564
Query: 184 LQLLEPFPKWDGKDLIDMAILIKIKGKCTTDHISAAGKWLKFRGHLDNISNNMFIGAVNS 363
LQLLEPF KWDGKDL D+ ILIK+KGKCTTDHISAAG WLKFRGHLDNISNN+ IGA+N
Sbjct: 565 LQLLEPFDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLLIGAINI 624
Query: 364 ENGEVNKVRHVVTGDWSDVPSTARNYKKAGIPWVVIGDENYGEGSSREHAALEPRHLGGR 543
ENG+ N VR+ VT ++ VP TAR YKK GI WVVIGDENYGEGSSREHAALEPRHLGGR
Sbjct: 625 ENGKANSVRNAVTQEFGPVPDTARYYKKHGIRWVVIGDENYGEGSSREHAALEPRHLGGR 684
Query: 544 VIIVKSFARIHETNLKKQGMLPLTFSKPEDYNKIQPSDKISLLNLAKFAPEKPVECEIKH 723
II KSFARIHETNLKKQG+LPLTF+ P DYNKI P DK+++ L FAP KP++C IKH
Sbjct: 685 AIITKSFARIHETNLKKQGLLPLTFADPSDYNKIHPVDKLTIQGLKDFAPGKPLKCVIKH 744
Query: 724 KDGTKEVITLNHTFNKNQIDWLKAGSALNRMRELK 828
+GT+E I LNHTFN+ QI+W +AGSALNRM+EL+
Sbjct: 745 PNGTQETILLNHTFNETQIEWFRAGSALNRMKELQ 779
>sp|Q9ER34|ACON_RAT Aconitate hydratase, mitochondrial precursor (Citrate hydro-lyase)
(Aconitase)
Length = 780
Score = 394 bits (1013), Expect = e-109
Identities = 190/275 (69%), Positives = 214/275 (77%)
Frame = +1
Query: 4 LNFNPLVDELTDAKGNKFKLSPPSGDTLPSRGFDAGENTYQKPPTDCGQIQVKVDPKSTR 183
L FNP D LT G KFKL P D LP FD G++TYQ PP D +V V P S R
Sbjct: 505 LKFNPETDFLTGKDGKKFKLEAPDADELPRSDFDPGQDTYQHPPKDSSGQRVDVSPTSQR 564
Query: 184 LQLLEPFPKWDGKDLIDMAILIKIKGKCTTDHISAAGKWLKFRGHLDNISNNMFIGAVNS 363
LQLLEPF KWDGKDL D+ ILIK+KGKCTTDHISAAG WLKFRGHLDNISNN+ IGA+N
Sbjct: 565 LQLLEPFDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLLIGAINI 624
Query: 364 ENGEVNKVRHVVTGDWSDVPSTARNYKKAGIPWVVIGDENYGEGSSREHAALEPRHLGGR 543
ENG+ N VR+ VT ++ VP TAR YKK GI WVVIGDENYGEGSSREHAALEPRHLGGR
Sbjct: 625 ENGKANSVRNAVTQEFGPVPDTARYYKKHGIRWVVIGDENYGEGSSREHAALEPRHLGGR 684
Query: 544 VIIVKSFARIHETNLKKQGMLPLTFSKPEDYNKIQPSDKISLLNLAKFAPEKPVECEIKH 723
II KSFARIHETNLKKQG+LPLTF+ P DYNKI P DK+++ L FAP KP+ C IKH
Sbjct: 685 AIITKSFARIHETNLKKQGLLPLTFADPSDYNKIHPVDKLTIQGLKDFAPGKPLNCIIKH 744
Query: 724 KDGTKEVITLNHTFNKNQIDWLKAGSALNRMRELK 828
+GT+E I LNHTFN+ QI+W +AGSALNRM+EL+
Sbjct: 745 PNGTQETILLNHTFNETQIEWFRAGSALNRMKELQ 779
>sp|P20004|ACON_BOVIN Aconitate hydratase, mitochondrial precursor (Citrate hydro-lyase)
(Aconitase)
Length = 780
Score = 394 bits (1011), Expect = e-109
Identities = 190/275 (69%), Positives = 214/275 (77%)
Frame = +1
Query: 4 LNFNPLVDELTDAKGNKFKLSPPSGDTLPSRGFDAGENTYQKPPTDCGQIQVKVDPKSTR 183
L FNP D LT G KFKL P D LP FD G++TYQ PP D QV V P S R
Sbjct: 505 LKFNPETDFLTGKDGKKFKLEAPDADELPRAEFDPGQDTYQHPPKDSSGQQVDVSPTSQR 564
Query: 184 LQLLEPFPKWDGKDLIDMAILIKIKGKCTTDHISAAGKWLKFRGHLDNISNNMFIGAVNS 363
LQLLEPF KWDG+DL D+ ILIK+KGKCTTDHISAAG WLKFRGHLDNISNN+ IGA+N
Sbjct: 565 LQLLEPFDKWDGRDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLLIGAINV 624
Query: 364 ENGEVNKVRHVVTGDWSDVPSTARNYKKAGIPWVVIGDENYGEGSSREHAALEPRHLGGR 543
ENG+ N VR+ VT ++ VP TAR YKK GI WVVIGDENYGEGSSREHAALEPRHLGGR
Sbjct: 625 ENGKANSVRNAVTQEFGPVPDTARYYKKHGIRWVVIGDENYGEGSSREHAALEPRHLGGR 684
Query: 544 VIIVKSFARIHETNLKKQGMLPLTFSKPEDYNKIQPSDKISLLNLAKFAPEKPVECEIKH 723
II KSFARIHETNLKKQG+LPLTF+ P DYNKI P DK+++ L FAP KP+ C IKH
Sbjct: 685 AIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLTIKGLKDFAPGKPLTCIIKH 744
Query: 724 KDGTKEVITLNHTFNKNQIDWLKAGSALNRMRELK 828
+GT+E I LNHTFN+ QI+W +AGSALNRM+EL+
Sbjct: 745 PNGTQETILLNHTFNETQIEWFRAGSALNRMKELQ 779
>sp|Q99798|ACON_HUMAN Aconitate hydratase, mitochondrial precursor (Citrate hydro-lyase)
(Aconitase)
Length = 780
Score = 392 bits (1006), Expect = e-109
Identities = 188/275 (68%), Positives = 213/275 (77%)
Frame = +1
Query: 4 LNFNPLVDELTDAKGNKFKLSPPSGDTLPSRGFDAGENTYQKPPTDCGQIQVKVDPKSTR 183
L FNP D LT G KF+L P D LP FD G++TYQ PP D V V P S R
Sbjct: 505 LKFNPETDYLTGTDGKKFRLEAPDADELPKGEFDPGQDTYQHPPKDSSGQHVDVSPTSQR 564
Query: 184 LQLLEPFPKWDGKDLIDMAILIKIKGKCTTDHISAAGKWLKFRGHLDNISNNMFIGAVNS 363
LQLLEPF KWDGKDL D+ ILIK+KGKCTTDHISAAG WLKFRGHLDNISNN+ IGA+N
Sbjct: 565 LQLLEPFDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLLIGAINI 624
Query: 364 ENGEVNKVRHVVTGDWSDVPSTARNYKKAGIPWVVIGDENYGEGSSREHAALEPRHLGGR 543
ENG+ N VR+ VT ++ VP TAR YKK GI WVVIGDENYGEGSSREHAALEPRHLGGR
Sbjct: 625 ENGKANSVRNAVTQEFGPVPDTARYYKKHGIRWVVIGDENYGEGSSREHAALEPRHLGGR 684
Query: 544 VIIVKSFARIHETNLKKQGMLPLTFSKPEDYNKIQPSDKISLLNLAKFAPEKPVECEIKH 723
II KSFARIHETNLKKQG+LPLTF+ P DYNKI P DK+++ L F P KP++C IKH
Sbjct: 685 AIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLTIQGLKDFTPGKPLKCIIKH 744
Query: 724 KDGTKEVITLNHTFNKNQIDWLKAGSALNRMRELK 828
+GT+E I LNHTFN+ QI+W +AGSALNRM+EL+
Sbjct: 745 PNGTQETILLNHTFNETQIEWFRAGSALNRMKELQ 779
>sp|P34455|ACON_CAEEL Probable aconitate hydratase, mitochondrial precursor (Citrate
hydro-lyase) (Aconitase)
Length = 777
Score = 389 bits (998), Expect = e-108
Identities = 186/274 (67%), Positives = 221/274 (80%)
Frame = +1
Query: 4 LNFNPLVDELTDAKGNKFKLSPPSGDTLPSRGFDAGENTYQKPPTDCGQIQVKVDPKSTR 183
L+FNPL DELT A G+KFKL P+G LP +G+D GE+T+Q P G QV V P S R
Sbjct: 502 LDFNPLTDELTAADGSKFKLQAPTGLDLPPKGYDPGEDTFQAPS---GSGQVDVSPSSDR 558
Query: 184 LQLLEPFPKWDGKDLIDMAILIKIKGKCTTDHISAAGKWLKFRGHLDNISNNMFIGAVNS 363
LQLL PF KWDGKDL DM ILIK+ GKCTTDHISAAG WLK+RGHLDNISNN+F+ A+N+
Sbjct: 559 LQLLSPFDKWDGKDLEDMKILIKVTGKCTTDHISAAGPWLKYRGHLDNISNNLFLTAINA 618
Query: 364 ENGEVNKVRHVVTGDWSDVPSTARNYKKAGIPWVVIGDENYGEGSSREHAALEPRHLGGR 543
+NGE+NKV++ VTG++ VP+TAR YK G+ WV IGDENYGEGSSREHAALEPRHLGGR
Sbjct: 619 DNGEMNKVKNQVTGEYGAVPATARKYKADGVRWVAIGDENYGEGSSREHAALEPRHLGGR 678
Query: 544 VIIVKSFARIHETNLKKQGMLPLTFSKPEDYNKIQPSDKISLLNLAKFAPEKPVECEIKH 723
IIVKSFARIHETNLKKQGMLPLTF+ P DY+KI PSD +S++ L+ FAP KP+ K
Sbjct: 679 AIIVKSFARIHETNLKKQGMLPLTFANPADYDKIDPSDNVSIVGLSSFAPGKPLTAIFKK 738
Query: 724 KDGTKEVITLNHTFNKNQIDWLKAGSALNRMREL 825
+G+K +TLNHTFN+ QI+W KAGSALNRM+E+
Sbjct: 739 TNGSKVEVTLNHTFNEQQIEWFKAGSALNRMKEV 772
>sp|P16276|ACON_PIG Aconitate hydratase, mitochondrial precursor (Citrate hydro-lyase)
(Aconitase)
Length = 781
Score = 387 bits (995), Expect = e-107
Identities = 187/275 (68%), Positives = 213/275 (77%)
Frame = +1
Query: 4 LNFNPLVDELTDAKGNKFKLSPPSGDTLPSRGFDAGENTYQKPPTDCGQIQVKVDPKSTR 183
L FNP D LT G KFKL P D LP FD G++TYQ PP D +V V P S R
Sbjct: 505 LKFNPETDFLTGKDGKKFKLEAPDADELPRAEFDPGQDTYQHPPKDSSGQRVDVSPTSQR 564
Query: 184 LQLLEPFPKWDGKDLIDMAILIKIKGKCTTDHISAAGKWLKFRGHLDNISNNMFIGAVNS 363
LQLLEPF KWDGKDL D+ ILIK+KGKCTTDHISAAG WLKFRGHLDNISNN+ IGA+N
Sbjct: 565 LQLLEPFDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLLIGAINI 624
Query: 364 ENGEVNKVRHVVTGDWSDVPSTARNYKKAGIPWVVIGDENYGEGSSREHAALEPRHLGGR 543
EN + N VR+ VT ++ VP TAR YK+ GI WVVIGDENYGEGSSREH ALEPRHLGGR
Sbjct: 625 ENRKANSVRNAVTQEFGPVPDTARYYKQHGIRWVVIGDENYGEGSSREHRALEPRHLGGR 684
Query: 544 VIIVKSFARIHETNLKKQGMLPLTFSKPEDYNKIQPSDKISLLNLAKFAPEKPVECEIKH 723
II KSFARIHETNLKKQG+LPLTF+ P DYNKI P DK+++ L FAP KP++C IKH
Sbjct: 685 AIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLTIQGLKDFAPGKPLKCIIKH 744
Query: 724 KDGTKEVITLNHTFNKNQIDWLKAGSALNRMRELK 828
+GT+E I LNHTFN+ QI+W +AGSALNRM+EL+
Sbjct: 745 PNGTQETILLNHTFNETQIEWFRAGSALNRMKELQ 779
>sp|P49609|ACON_GRAVE Aconitate hydratase, mitochondrial precursor (Citrate hydro-lyase)
(Aconitase)
Length = 779
Score = 375 bits (962), Expect = e-103
Identities = 178/272 (65%), Positives = 205/272 (75%)
Frame = +1
Query: 4 LNFNPLVDELTDAKGNKFKLSPPSGDTLPSRGFDAGENTYQKPPTDCGQIQVKVDPKSTR 183
L FNP D L A G +FKL+ PSGD LP GFD GE+T+Q P D I V++DP S R
Sbjct: 503 LKFNPATDSLQGADGAEFKLAAPSGDELPVMGFDPGEDTFQPPSDDSTSILVQIDPDSQR 562
Query: 184 LQLLEPFPKWDGKDLIDMAILIKIKGKCTTDHISAAGKWLKFRGHLDNISNNMFIGAVNS 363
L LEPFP WDGKD DM +LIK +GKCTTDHIS AG WLKFRGHLDNISNNM IGAVN
Sbjct: 563 LSFLEPFPAWDGKDYTDMPVLIKARGKCTTDHISMAGPWLKFRGHLDNISNNMLIGAVND 622
Query: 364 ENGEVNKVRHVVTGDWSDVPSTARNYKKAGIPWVVIGDENYGEGSSREHAALEPRHLGGR 543
ENGE+N V++ VTG++ VP TAR YK G+ WVVIGDENYGEGSSREHAALEPRHLGG
Sbjct: 623 ENGEINNVKNAVTGEYGTVPDTARAYKAEGVKWVVIGDENYGEGSSREHAALEPRHLGGV 682
Query: 544 VIIVKSFARIHETNLKKQGMLPLTFSKPEDYNKIQPSDKISLLNLAKFAPEKPVECEIKH 723
+IVKSFARIHETNLKKQGMLPLTF+ P DY+KI SDK+SL+ L P +PV +
Sbjct: 683 AVIVKSFARIHETNLKKQGMLPLTFNNPADYDKIDSSDKVSLVGLKNLTPGEPVTMTVTK 742
Query: 724 KDGTKEVITLNHTFNKNQIDWLKAGSALNRMR 819
DGT I LNHTFN Q++W +AGSALN+++
Sbjct: 743 ADGTSMDILLNHTFNDEQLEWFRAGSALNKIK 774
>sp|P19414|ACON_YEAST Aconitate hydratase, mitochondrial precursor (Citrate hydro-lyase)
(Aconitase)
Length = 778
Score = 362 bits (929), Expect = e-100
Identities = 174/273 (63%), Positives = 203/273 (74%)
Frame = +1
Query: 1 DLNFNPLVDELTDAKGNKFKLSPPSGDTLPSRGFDAGENTYQKPPTDCGQIQVKVDPKST 180
DL FNPL D+L D GN+F L PP GD LP RG+DAGENTYQ PP D ++VKV P S
Sbjct: 501 DLRFNPLTDKLKDKDGNEFMLKPPHGDGLPQRGYDAGENTYQAPPADRSTVEVKVSPTSD 560
Query: 181 RLQLLEPFPKWDGKDLIDMAILIKIKGKCTTDHISAAGKWLKFRGHLDNISNNMFIGAVN 360
RLQLL+PF WDGKD DM ILIK GK TTDHIS AG WLK+RGHL+NISNN IGA+N
Sbjct: 561 RLQLLKPFKPWDGKDAKDMPILIKAVGKTTTDHISMAGPWLKYRGHLENISNNYMIGAIN 620
Query: 361 SENGEVNKVRHVVTGDWSDVPSTARNYKKAGIPWVVIGDENYGEGSSREHAALEPRHLGG 540
+EN + N V++V TG++ VP TAR+Y+ GI WVVIGDEN+GEGSSREHAALEPR LGG
Sbjct: 621 AENKKANCVKNVYTGEYKGVPDTARDYRDQGIKWVVIGDENFGEGSSREHAALEPRFLGG 680
Query: 541 RVIIVKSFARIHETNLKKQGMLPLTFSKPEDYNKIQPSDKISLLNLAKFAPEKPVECEIK 720
II KSFARIHETNLKKQG+LPL F P DY+KI P D+I +L LA+ AP KPV +
Sbjct: 681 FAIITKSFARIHETNLKKQGLLPLNFKNPADYDKINPDDRIDILGLAELAPGKPVTMRVH 740
Query: 721 HKDGTKEVITLNHTFNKNQIDWLKAGSALNRMR 819
K+G L HTFN QI+W K GSALN+++
Sbjct: 741 PKNGKPWDAVLTHTFNDEQIEWFKYGSALNKIK 773
>sp|O13966|ACON_SCHPO Aconitate hydratase, mitochondrial precursor (Citrate hydro-lyase)
(Aconitase)
Length = 778
Score = 341 bits (875), Expect = 1e-93
Identities = 165/276 (59%), Positives = 201/276 (72%), Gaps = 1/276 (0%)
Frame = +1
Query: 1 DLNFNPLVDELTDAKGNKFKLSPPSGDTLPSRGFDAGENTYQKPPTDCGQIQVKVDPKST 180
D+NFNPL D L D GN FK PP+G LPS+G+D G NTY P + V +DP S
Sbjct: 500 DMNFNPLTDTLKDKDGNDFKFEPPTGAGLPSKGYDPGSNTYVAP-SSVNVKDVAIDPHSK 558
Query: 181 RLQLLEPFPKWDGKDLIDMAILIKIKGKCTTDHISAAGKWLKFRGHLDNISNNMFIGAVN 360
RLQ L PF KWDGKD+ + ILIK KGKCTTDHISAAG WLK+RGHL NISNN IGA+N
Sbjct: 559 RLQRLTPFKKWDGKDMKGLKILIKAKGKCTTDHISAAGPWLKYRGHLQNISNNYMIGAIN 618
Query: 361 SENGEVNKVRHVVTGDWSDVPSTARNYKKAGIPWVVIGDENYGEGSSREHAALEPRHLGG 540
+ENGE NK++ +TG++ VP+ A +Y+ GI WV +G++N+GEGSSREHAALEPR+LGG
Sbjct: 619 AENGEANKLKDQLTGEYKTVPNVAIDYRDHGIRWVTLGEQNFGEGSSREHAALEPRYLGG 678
Query: 541 RVIIVKSFARIHETNLKKQGMLPLTFSKPEDYNKIQPSDKISLLNLAKFAPEKPVECEIK 720
+I KSFARIHETNLKKQG+LPLTF+ P Y+KI P D + + L FAP KP+ +
Sbjct: 679 AAVITKSFARIHETNLKKQGLLPLTFADPAAYDKISPFDTVDIDGLTTFAPGKPLTLVVH 738
Query: 721 HKDGTKEVIT-LNHTFNKNQIDWLKAGSALNRMREL 825
DG+ E T LNHTFNK+QI+W KAGSALN M +
Sbjct: 739 PADGSAEWSTKLNHTFNKDQIEWFKAGSALNHMANM 774
>sp|P39533|ACON2_YEAST Putative aconitase in PRP21-UBP12 intergenic region
Length = 789
Score = 280 bits (717), Expect = 3e-75
Identities = 141/283 (49%), Positives = 183/283 (64%), Gaps = 7/283 (2%)
Frame = +1
Query: 1 DLNFNPLVDELTDAKGNKFKLSPPSGDTLPSRGFDAGENTY--QKPPTDCGQIQVKVDPK 174
D FNPL D + G FK PP GD LP RGF+ G + + + P +++KVDP
Sbjct: 506 DAQFNPLTDSIKLPNGKDFKFQPPKGDELPKRGFEHGRDKFYPEMDPKPDSNVEIKVDPN 565
Query: 175 STRLQLLEPFPKWDGKDLIDMAILIKIKGKCTTDHISAAGKWLKFRGHLDNISNNMFIGA 354
S RLQLLEPF W+GK+L +L+K++GKCTTDHISAAG WLK++GHL+NIS N IGA
Sbjct: 566 SDRLQLLEPFKPWNGKEL-KTNVLLKVEGKCTTDHISAAGVWLKYKGHLENISYNTLIGA 624
Query: 355 VNSENGEVNKVRHVVTGDWSDVPSTARNYKKAGIPWVVIGDENYGEGSSREHAALEPRHL 534
N E GEVNK + + G D+P +K G PW VI + NYGEGS+REHAAL PR L
Sbjct: 625 QNKETGEVNKA-YDLDGTEYDIPGLMMKWKSDGRPWTVIAEHNYGEGSAREHAALSPRFL 683
Query: 535 GGRVIIVKSFARIHETNLKKQGMLPLTFSKPEDYNKIQPSDKISLLNLAKFAPEK----- 699
GG +++VKSFARIHETNLKKQG+LPLTF+ DY+KI D + LNL +
Sbjct: 684 GGEILLVKSFARIHETNLKKQGVLPLTFANESDYDKISSGDVLETLNLVDMIAKDGNNGG 743
Query: 700 PVECEIKHKDGTKEVITLNHTFNKNQIDWLKAGSALNRMRELK 828
++ +I +G I HT +K+QID+ KAGSA+N + ++
Sbjct: 744 EIDVKITKPNGESFTIKAKHTMSKDQIDFFKAGSAINYIGNIR 786
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.316 0.136 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,841,886
Number of Sequences: 369166
Number of extensions: 2230398
Number of successful extensions: 6604
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6580
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8293644780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)