Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_026_B15
(711 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P92176|ACT2_LUMTE Actin-2 419 e-117
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 418 e-117
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 418 e-117
sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic 418 e-117
sp|P53463|ACTM_HELER Actin, cytoskeletal (M) 418 e-117
sp|P10984|ACT2_CAEEL Actin-2 418 e-117
sp|P53470|ACT1_SCHMA Actin-1 418 e-117
sp|Q26065|ACT_PLAMG Actin, adductor muscle 418 e-117
sp|P53464|ACTM_HELTB Actin, cytoskeletal (M) 418 e-117
sp|P92179|ACTC_BIOGL Actin, cytoplasmic 417 e-116
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 419 bits (1076), Expect = e-117
Identities = 204/208 (98%), Positives = 208/208 (100%)
Frame = +2
Query: 11 MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 190
M++EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MAEEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 191 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 370
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 371 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 550
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 551 LAGRDLTDYVMKILTERGYSFTTTAERE 634
LAGRDLTDY+MKILTERGYSFTTTAERE
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAERE 208
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 418 bits (1075), Expect = e-117
Identities = 204/208 (98%), Positives = 206/208 (99%)
Frame = +2
Query: 11 MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 190
M DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 191 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 370
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 371 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 550
TQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLD 180
Query: 551 LAGRDLTDYVMKILTERGYSFTTTAERE 634
LAGRDLTDY+MKILTERGYSFTTTAERE
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAERE 208
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 418 bits (1075), Expect = e-117
Identities = 204/208 (98%), Positives = 206/208 (99%)
Frame = +2
Query: 11 MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 190
M DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 191 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 370
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 371 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 550
TQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLD 180
Query: 551 LAGRDLTDYVMKILTERGYSFTTTAERE 634
LAGRDLTDY+MKILTERGYSFTTTAERE
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAERE 208
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
Length = 376
Score = 418 bits (1075), Expect = e-117
Identities = 204/208 (98%), Positives = 206/208 (99%)
Frame = +2
Query: 11 MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 190
M DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 191 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 370
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 371 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 550
TQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLD 180
Query: 551 LAGRDLTDYVMKILTERGYSFTTTAERE 634
LAGRDLTDY+MKILTERGYSFTTTAERE
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAERE 208
>sp|P53463|ACTM_HELER Actin, cytoskeletal (M)
Length = 376
Score = 418 bits (1075), Expect = e-117
Identities = 208/224 (92%), Positives = 214/224 (95%)
Frame = +2
Query: 11 MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 190
M D++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 191 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 370
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 371 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 550
TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 551 LAGRDLTDYVMKILTERGYSFTTTAERES*EISRELVTSL*FDA 682
LAGRDLTDY+MKILTERGYSFTTTAER EI R++ L + A
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAER---EIVRDIKEKLCYSA 221
>sp|P10984|ACT2_CAEEL Actin-2
Length = 376
Score = 418 bits (1074), Expect = e-117
Identities = 204/208 (98%), Positives = 206/208 (99%)
Frame = +2
Query: 11 MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 190
M D+DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 191 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 370
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 371 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 550
TQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 551 LAGRDLTDYVMKILTERGYSFTTTAERE 634
LAGRDLTDY+MKILTERGYSFTTTAERE
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAERE 208
>sp|P53470|ACT1_SCHMA Actin-1
Length = 376
Score = 418 bits (1074), Expect = e-117
Identities = 203/208 (97%), Positives = 207/208 (99%)
Frame = +2
Query: 11 MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 190
M++EDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MAEEDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 191 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 370
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 371 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 550
TQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 551 LAGRDLTDYVMKILTERGYSFTTTAERE 634
LAGRDLTDY+MKILTERGYSFTTTAERE
Sbjct: 181 LAGRDLTDYMMKILTERGYSFTTTAERE 208
>sp|Q26065|ACT_PLAMG Actin, adductor muscle
Length = 376
Score = 418 bits (1074), Expect = e-117
Identities = 204/208 (98%), Positives = 207/208 (99%)
Frame = +2
Query: 11 MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 190
M D++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 191 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 370
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 371 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 550
TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 551 LAGRDLTDYVMKILTERGYSFTTTAERE 634
LAGRDLTDY+MKILTERGYSFTTTAERE
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAERE 208
>sp|P53464|ACTM_HELTB Actin, cytoskeletal (M)
Length = 376
Score = 418 bits (1074), Expect = e-117
Identities = 204/208 (98%), Positives = 207/208 (99%)
Frame = +2
Query: 11 MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 190
M D++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 191 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 370
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 371 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 550
TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 551 LAGRDLTDYVMKILTERGYSFTTTAERE 634
LAGRDLTDY+MKILTERGYSFTTTAERE
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAERE 208
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
Length = 376
Score = 417 bits (1073), Expect = e-116
Identities = 203/208 (97%), Positives = 206/208 (99%)
Frame = +2
Query: 11 MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 190
M DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 191 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 370
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 371 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 550
TQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLD 180
Query: 551 LAGRDLTDYVMKILTERGYSFTTTAERE 634
LAGRDLTDY+MKILTERGYSFTTTAERE
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAERE 208
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,197,287
Number of Sequences: 369166
Number of extensions: 1809034
Number of successful extensions: 6345
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6251
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6267895215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)