Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_026_A24
(771 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8WW22|DNJA4_HUMAN DnaJ homolog subfamily A member 4 189 5e-48
sp|P31689|DNJA1_HUMAN DnaJ homolog subfamily A member 1 (He... 189 7e-48
sp|P63036|DNJA1_RAT DnaJ homolog subfamily A member 1 (DnaJ... 189 7e-48
sp|Q9JMC3|DNJA4_MOUSE DnaJ homolog subfamily A member 4 (Mm... 187 3e-47
sp|P42824|DNJH2_ALLPO DnaJ protein homolog 2 166 6e-41
sp|O60884|DNJA2_HUMAN DnaJ homolog subfamily A member 2 (HI... 164 3e-40
sp|Q9QYJ0|DNJA2_MOUSE DnaJ homolog subfamily A member 2 (mDj3) 162 7e-40
sp|Q03363|DNJH1_ALLPO DnaJ protein homolog 1 (DNAJ-1) 162 7e-40
sp|O35824|DNJA2_RAT DnaJ homolog subfamily A member 2 (RDJ2) 160 3e-39
sp|Q94AW8|DNAJ3_ARATH Chaperone protein dnaJ 3 (AtJ3) (AtDjA3) 152 1e-36
>sp|Q8WW22|DNJA4_HUMAN DnaJ homolog subfamily A member 4
Length = 397
Score = 189 bits (481), Expect = 5e-48
Identities = 98/199 (49%), Positives = 136/199 (68%)
Frame = +3
Query: 3 LEVHIDKGMTDGQQIKFNGEGDQEPGLEPGDICIVLEEKPHNVFTRKKADLIYNMKLDLV 182
+EVH++KGM DGQ+I F+GEGDQEP LEPGD+ IVL++K H+VF R+ DLI MK+ L
Sbjct: 209 IEVHVEKGMKDGQKILFHGEGDQEPELEPGDVIIVLDQKDHSVFQRRGHDLIMKMKIQLS 268
Query: 183 DSLCGFKRTITTLDNRILVVETKPGEVIKNLEYRAIDNEGMPKYKSPFEQGRLIIQFDVV 362
++LCGFK+TI TLDNRILV+ +K GEVIK+ + R + +EGMP YK+P E+G LIIQF V+
Sbjct: 269 EALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGMPIYKAPLEKGILIIQFLVI 328
Query: 363 FPENNFLPTDKLNKLRSILPPSQFSSSLDNMKEAEECVLHPYDPSMANSKSQDRYHERHH 542
FPE ++L +KL +L ++LPP Q D+M + E L + P+ N + +
Sbjct: 329 FPEKHWLSLEKLPQLEALLPPRQKVRITDDMDQVE---LKEFCPNEQN------WRQHRE 379
Query: 543 VYDSDDEGGMPGGAQRVQC 599
Y+ D++G G VQC
Sbjct: 380 AYEEDEDGPQAG----VQC 394
>sp|P31689|DNJA1_HUMAN DnaJ homolog subfamily A member 1 (Heat shock 40 kDa protein 4)
(DnaJ protein homolog 2) (HSJ-2) (HSDJ)
Length = 397
Score = 189 bits (480), Expect = 7e-48
Identities = 98/195 (50%), Positives = 131/195 (67%)
Frame = +3
Query: 3 LEVHIDKGMTDGQQIKFNGEGDQEPGLEPGDICIVLEEKPHNVFTRKKADLIYNMKLDLV 182
LEVHIDKGM DGQ+I F+GEGDQEPGLEPGDI IVL++K H VFTR+ DL M + LV
Sbjct: 208 LEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLV 267
Query: 183 DSLCGFKRTITTLDNRILVVETKPGEVIKNLEYRAIDNEGMPKYKSPFEQGRLIIQFDVV 362
++LCGF++ I+TLDNR +V+ + PG+++K+ + + + NEGMP Y+ P+E+GRLII+F V
Sbjct: 268 EALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVN 327
Query: 363 FPENNFLPTDKLNKLRSILPPSQFSSSLDNMKEAEECVLHPYDPSMANSKSQDRYHERHH 542
FPEN FL DKL+ L +LP + D M + E L +DP+ + R H
Sbjct: 328 FPENGFLSPDKLSLLEKLLPERKEVEETDEMDQVE---LVDFDPN-----QERRRHYNGE 379
Query: 543 VYDSDDEGGMPGGAQ 587
Y+ DDE GG Q
Sbjct: 380 AYE-DDEHHPRGGVQ 393
>sp|P63036|DNJA1_RAT DnaJ homolog subfamily A member 1 (DnaJ-like protein 1)
sp|P63037|DNJA1_MOUSE DnaJ homolog subfamily A member 1 (Heat shock 40 kDa protein 4)
(DnaJ protein homolog 2) (HSJ-2)
Length = 397
Score = 189 bits (480), Expect = 7e-48
Identities = 98/195 (50%), Positives = 131/195 (67%)
Frame = +3
Query: 3 LEVHIDKGMTDGQQIKFNGEGDQEPGLEPGDICIVLEEKPHNVFTRKKADLIYNMKLDLV 182
LEVHIDKGM DGQ+I F+GEGDQEPGLEPGDI IVL++K H VFTR+ DL M + LV
Sbjct: 208 LEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLV 267
Query: 183 DSLCGFKRTITTLDNRILVVETKPGEVIKNLEYRAIDNEGMPKYKSPFEQGRLIIQFDVV 362
++LCGF++ I+TLDNR +V+ + PG+++K+ + + + NEGMP Y+ P+E+GRLII+F V
Sbjct: 268 EALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVN 327
Query: 363 FPENNFLPTDKLNKLRSILPPSQFSSSLDNMKEAEECVLHPYDPSMANSKSQDRYHERHH 542
FPEN FL DKL+ L +LP + D M + E L +DP+ + R H
Sbjct: 328 FPENGFLSPDKLSLLEKLLPERKEVEETDEMDQVE---LVDFDPN-----QERRRHYNGE 379
Query: 543 VYDSDDEGGMPGGAQ 587
Y+ DDE GG Q
Sbjct: 380 AYE-DDEHHPRGGVQ 393
>sp|Q9JMC3|DNJA4_MOUSE DnaJ homolog subfamily A member 4 (MmDjA4)
Length = 397
Score = 187 bits (475), Expect = 3e-47
Identities = 96/199 (48%), Positives = 135/199 (67%)
Frame = +3
Query: 3 LEVHIDKGMTDGQQIKFNGEGDQEPGLEPGDICIVLEEKPHNVFTRKKADLIYNMKLDLV 182
+EVH++KGM DGQ+I F+GEGDQEP L+PGD+ IVL++K H+VF R+ DLI MK+ L
Sbjct: 209 IEVHVEKGMKDGQKILFHGEGDQEPELDPGDVIIVLDQKDHSVFQRRGQDLIMKMKIQLS 268
Query: 183 DSLCGFKRTITTLDNRILVVETKPGEVIKNLEYRAIDNEGMPKYKSPFEQGRLIIQFDVV 362
++LCGFK+TI TLD+R+LV+ +K GEVIK+ + + I NEGMP YK+P E+G +IIQF VV
Sbjct: 269 EALCGFKKTIKTLDDRVLVISSKSGEVIKHGDLKCIRNEGMPIYKAPLEKGVMIIQFLVV 328
Query: 363 FPENNFLPTDKLNKLRSILPPSQFSSSLDNMKEAEECVLHPYDPSMANSKSQDRYHERHH 542
FPE +L +KL +L ++LPP Q D+M + E L ++P ++ + +
Sbjct: 329 FPEKQWLSQEKLPQLEALLPPRQKVRITDDMDQVE---LKEFNP------NEQSWRQHRE 379
Query: 543 VYDSDDEGGMPGGAQRVQC 599
Y+ DDE G VQC
Sbjct: 380 AYEEDDEEPRAG----VQC 394
>sp|P42824|DNJH2_ALLPO DnaJ protein homolog 2
Length = 418
Score = 166 bits (420), Expect = 6e-41
Identities = 91/202 (45%), Positives = 129/202 (63%), Gaps = 2/202 (0%)
Frame = +3
Query: 3 LEVHIDKGMTDGQQIKFNGEGDQEPGLEPGDICIVLEEKPHNVFTRKKADLIYNMKLDLV 182
LEVH++KGM +GQ+I F GE D+ P GDI VL++K H F RK DL Y L L
Sbjct: 222 LEVHVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFYEHSLSLT 281
Query: 183 DSLCGFKRTITTLDNRILVVETKPGEVIKNLEYRAIDNEGMPKYKSPFEQGRLIIQFDVV 362
++LCGF+ +T LDNR L++++ PGEVIK +++ I++EGMP Y+ PF +G+L I F V
Sbjct: 282 EALCGFQFVLTHLDNRQLLIKSNPGEVIKPDQFKGINDEGMPMYQRPFMRGKLYIHFSVD 341
Query: 363 FPENNFLPTDKLNKLRSILPPSQFSSSLDNMK--EAEECVLHPYDPSMANSKSQDRYHER 536
FP++ L D+ L S+L PS+ +S L +M+ E EE +H D ++ + ++ +
Sbjct: 342 FPDS--LTPDQCKALESVL-PSRNASRLTDMEIDECEETTMH--DVNIEEEMRRKQHQQA 396
Query: 537 HHVYDSDDEGGMPGGAQRVQCA 602
YD DDEG GGAQRVQCA
Sbjct: 397 QEAYDEDDEG--HGGAQRVQCA 416
>sp|O60884|DNJA2_HUMAN DnaJ homolog subfamily A member 2 (HIRA interacting protein 4)
(Cell cycle progression restoration gene 3 protein)
(Dnj3)
Length = 412
Score = 164 bits (414), Expect = 3e-40
Identities = 90/200 (45%), Positives = 121/200 (60%)
Frame = +3
Query: 3 LEVHIDKGMTDGQQIKFNGEGDQEPGLEPGDICIVLEEKPHNVFTRKKADLIYNMKLDLV 182
LEVH+DKGM GQ+I F GE DQ PG+EPGDI ++L+EK H VF R DL K+ LV
Sbjct: 217 LEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLV 276
Query: 183 DSLCGFKRTITTLDNRILVVETKPGEVIKNLEYRAIDNEGMPKYKSPFEQGRLIIQFDVV 362
++LCGF+ T LD R +VV+ PG+VI+ R + EGMP+Y++PFE+G L I+FDV
Sbjct: 277 EALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQ 336
Query: 363 FPENNFLPTDKLNKLRSILPPSQFSSSLDNMKEAEECVLHPYDPSMANSKSQDRYHERHH 542
FPENN++ DKL++L +LP ++ + E EE L +D + + Q R
Sbjct: 337 FPENNWINPDKLSELEDLLPSRPEVPNI--IGETEEVELQEFDSTRGSGGGQ----RREA 390
Query: 543 VYDSDDEGGMPGGAQRVQCA 602
DS DE VQCA
Sbjct: 391 YNDSSDEESSSHHGPGVQCA 410
>sp|Q9QYJ0|DNJA2_MOUSE DnaJ homolog subfamily A member 2 (mDj3)
Length = 412
Score = 162 bits (411), Expect = 7e-40
Identities = 90/200 (45%), Positives = 121/200 (60%)
Frame = +3
Query: 3 LEVHIDKGMTDGQQIKFNGEGDQEPGLEPGDICIVLEEKPHNVFTRKKADLIYNMKLDLV 182
LEVH+DKGM GQ+I F GE DQ PG+EPGDI ++L+EK H VF R DL K+ LV
Sbjct: 217 LEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLV 276
Query: 183 DSLCGFKRTITTLDNRILVVETKPGEVIKNLEYRAIDNEGMPKYKSPFEQGRLIIQFDVV 362
++LCGF+ T LD R +VV+ PG+VI+ R + EGMP+Y++PFE+G L I+FDV
Sbjct: 277 EALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQ 336
Query: 363 FPENNFLPTDKLNKLRSILPPSQFSSSLDNMKEAEECVLHPYDPSMANSKSQDRYHERHH 542
FPENN++ DKL++L +LP ++ + E EE L +D + + Q R
Sbjct: 337 FPENNWINPDKLSELEDLLPSRPEVPNV--IGETEEVELQEFDSTRGSGGGQ----RREA 390
Query: 543 VYDSDDEGGMPGGAQRVQCA 602
DS DE VQCA
Sbjct: 391 YNDSSDEESSSHHGPGVQCA 410
>sp|Q03363|DNJH1_ALLPO DnaJ protein homolog 1 (DNAJ-1)
Length = 397
Score = 162 bits (411), Expect = 7e-40
Identities = 88/201 (43%), Positives = 124/201 (61%), Gaps = 1/201 (0%)
Frame = +3
Query: 3 LEVHIDKGMTDGQQIKFNGEGDQEPGLEPGDICIVLEEKPHNVFTRKKADLIYNMKLDLV 182
LEVH++KGM +GQ+I F GE D+ P GDI VL++K H F RK DL Y L L
Sbjct: 201 LEVHVEKGMQNGQRITFPGEADEAPDTVTGDIVFVLQQKEHPKFQRKGDDLFYKHTLSLT 260
Query: 183 DSLCGFKRTITTLDNRILVVETKPGEVIKNLEYRAIDNEGMPKYKSPFEQGRLIIQFDVV 362
++LCGF+ +T LD R L++++ PGEV+K +++AI++EGMP Y+ PF +G+L IQF V
Sbjct: 261 EALCGFQFVLTHLDGRQLLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIQFLVD 320
Query: 363 FPENNFLPTDKLNKLRSILPPSQFSSSLD-NMKEAEECVLHPYDPSMANSKSQDRYHERH 539
FP++ L D+ + S+LP S S D + E EE +H D ++ + ++
Sbjct: 321 FPDS--LTPDQCKVIESVLPRSASSQLTDMEIDECEETTMH--DVNIEEEMRRKQHQHAQ 376
Query: 540 HVYDSDDEGGMPGGAQRVQCA 602
YD DDEG GG QRVQCA
Sbjct: 377 EAYDEDDEG--HGGGQRVQCA 395
>sp|O35824|DNJA2_RAT DnaJ homolog subfamily A member 2 (RDJ2)
Length = 412
Score = 160 bits (406), Expect = 3e-39
Identities = 89/200 (44%), Positives = 120/200 (60%)
Frame = +3
Query: 3 LEVHIDKGMTDGQQIKFNGEGDQEPGLEPGDICIVLEEKPHNVFTRKKADLIYNMKLDLV 182
LEVH+DKGM GQ+I F GE DQ PG+EPGDI + ++EK H VF R DL K+ LV
Sbjct: 217 LEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLFVQEKEHEVFQRDGNDLHMTYKIGLV 276
Query: 183 DSLCGFKRTITTLDNRILVVETKPGEVIKNLEYRAIDNEGMPKYKSPFEQGRLIIQFDVV 362
++LCGF+ T LD R +VV+ PG+VI+ R + EGMP+Y++PFE+G L I+FDV
Sbjct: 277 EALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQ 336
Query: 363 FPENNFLPTDKLNKLRSILPPSQFSSSLDNMKEAEECVLHPYDPSMANSKSQDRYHERHH 542
FPENN++ DKL++L +LP ++ + E EE L +D + + Q R
Sbjct: 337 FPENNWINPDKLSELEDLLPSRPEVPNV--IGETEEVELQEFDSTRGSGGGQ----RREA 390
Query: 543 VYDSDDEGGMPGGAQRVQCA 602
DS DE VQCA
Sbjct: 391 YNDSSDEESSSHHGPGVQCA 410
>sp|Q94AW8|DNAJ3_ARATH Chaperone protein dnaJ 3 (AtJ3) (AtDjA3)
Length = 420
Score = 152 bits (384), Expect = 1e-36
Identities = 84/201 (41%), Positives = 119/201 (59%), Gaps = 1/201 (0%)
Frame = +3
Query: 3 LEVHIDKGMTDGQQIKFNGEGDQEPGLEPGDICIVLEEKPHNVFTRKKADLIYNMKLDLV 182
LEV+++KGM Q+I F G+ D+ P GDI VL++K H F RK DL L L
Sbjct: 222 LEVNVEKGMQHSQKITFEGQADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFVEHTLSLT 281
Query: 183 DSLCGFKRTITTLDNRILVVETKPGEVIKNLEYRAIDNEGMPKYKSPFEQGRLIIQFDVV 362
++LCGF+ +T LD R L++++ PGEV+K Y+AI +EGMP Y+ PF +G+L I F V
Sbjct: 282 EALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVE 341
Query: 363 FPENNFLPTDKLNKLRSILP-PSQFSSSLDNMKEAEECVLHPYDPSMANSKSQDRYHERH 539
FP++ L D+ L ++LP PS S + E EE LH D ++ + + +R
Sbjct: 342 FPDS--LSPDQTKALEAVLPKPSTAQLSDMEIDECEETTLH--DVNIEDEMRRKAQAQRE 397
Query: 540 HVYDSDDEGGMPGGAQRVQCA 602
D D++ PGGAQRVQCA
Sbjct: 398 AYDDDDEDDDHPGGAQRVQCA 418
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,689,263
Number of Sequences: 369166
Number of extensions: 1648187
Number of successful extensions: 4849
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4762
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7163732800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)