Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_026_A12
(161 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted pr... 52 4e-07
sp|P54639|CYSP4_DICDI Cysteine proteinase 4 precursor 51 1e-06
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 49 3e-06
sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathe... 49 3e-06
sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precu... 49 3e-06
sp|Q10991|CATL_SHEEP Cathepsin L [Contains: Cathepsin L hea... 49 5e-06
sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted ... 48 6e-06
sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Catheps... 48 6e-06
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 47 1e-05
sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathe... 47 1e-05
>sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted protein) (MEP) (Cyclic
protein 2) (CP-2) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 52.0 bits (123), Expect = 4e-07
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +2
Query: 5 WGIDGYIKMSKDANNQCGIATMASYPLV 88
WG+DGYIK++KD NN CG+AT ASYP+V
Sbjct: 306 WGMDGYIKIAKDRNNHCGLATAASYPIV 333
>sp|P54639|CYSP4_DICDI Cysteine proteinase 4 precursor
Length = 442
Score = 50.8 bits (120), Expect = 1e-06
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +2
Query: 5 WGIDGYIKMSKDANNQCGIATMASYP 82
WG+DGYI MSKD NN CGIATMAS+P
Sbjct: 412 WGMDGYIFMSKDRNNNCGIATMASFP 437
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 49.3 bits (116), Expect = 3e-06
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +2
Query: 5 WGIDGYIKMSKDANNQCGIATMASYPLV 88
WG +GY+KM+KD NN CGIAT ASYP V
Sbjct: 306 WGWNGYVKMAKDQNNHCGIATAASYPTV 333
>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 49.3 bits (116), Expect = 3e-06
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +2
Query: 5 WGIDGYIKMSKDANNQCGIATMASYPLV 88
WG +GY+KM+KD NN CGIAT ASYP V
Sbjct: 307 WGWNGYVKMAKDQNNHCGIATAASYPTV 334
>sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precursor
Length = 323
Score = 49.3 bits (116), Expect = 3e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +2
Query: 5 WGIDGYIKMSKDANNQCGIATMASYPLV 88
WG GYIKMS++ NN CGIAT+ASYPLV
Sbjct: 296 WGDAGYIKMSRNRNNNCGIATVASYPLV 323
>sp|Q10991|CATL_SHEEP Cathepsin L [Contains: Cathepsin L heavy chain; Cathepsin L light
chain]
Length = 217
Score = 48.5 bits (114), Expect = 5e-06
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +2
Query: 5 WGIDGYIKMSKDANNQCGIATMASYPLV 88
WG GY+KM+KD NN CGIAT ASYP V
Sbjct: 190 WGNKGYVKMAKDQNNHCGIATAASYPTV 217
>sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted protein) (MEP) (p39 cysteine
proteinase) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 48.1 bits (113), Expect = 6e-06
Identities = 18/28 (64%), Positives = 25/28 (89%)
Frame = +2
Query: 5 WGIDGYIKMSKDANNQCGIATMASYPLV 88
WG++GYIK++KD +N CG+AT ASYP+V
Sbjct: 306 WGMEGYIKIAKDRDNHCGLATAASYPVV 333
>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 48.1 bits (113), Expect = 6e-06
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +2
Query: 5 WGIDGYIKMSKDANNQCGIATMASYPLV 88
WG +GY+KM+KD NN CGI+T ASYP V
Sbjct: 307 WGWNGYVKMAKDQNNHCGISTAASYPTV 334
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 47.4 bits (111), Expect = 1e-05
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +2
Query: 5 WGIDGYIKMSKDANNQCGIATMASYPLV 88
WG +GY+K++KD NN CGIAT ASYP V
Sbjct: 307 WGSNGYVKIAKDKNNHCGIATAASYPNV 334
>sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 339
Score = 47.0 bits (110), Expect = 1e-05
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +2
Query: 5 WGIDGYIKMSKDANNQCGIATMASYPLV 88
WG GYIKM+++ NNQCGIAT +SYP V
Sbjct: 312 WGEQGYIKMARNQNNQCGIATASSYPTV 339
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,038,637
Number of Sequences: 369166
Number of extensions: 206546
Number of successful extensions: 470
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 68,354,980
effective HSP length: 26
effective length of database: 63,551,870
effective search space used: 1715900490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)