Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_026_A07
(912 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q6X6Z7|TEKT3_MOUSE Tektin-3 233 6e-61
sp|Q9BXF9|TEKT3_HUMAN Tektin-3 231 2e-60
sp|Q9DAJ2|TEKT1_MOUSE Tektin-1 147 5e-35
sp|Q969V4|TEKT1_HUMAN Tektin-1 142 2e-33
sp|Q99JD2|TEKT1_RAT Tektin-1 140 6e-33
sp|Q922G7|TEKT2_MOUSE Tektin-2 (Testicular tektin) (Tektin-t) 96 2e-19
sp|Q6AYM2|TEKT2_RAT Tektin-2 (Testicular tektin) (Tektin-t) 94 7e-19
sp|Q9UIF3|TEKT2_HUMAN Tektin-2 (Testicular tektin) (Tektin-... 86 1e-16
sp|Q26648|TKB1_STRPU Tektin-B1 70 6e-12
sp|O93308|SMC1A_XENLA Structural maintenance of chromosome ... 40 0.009
>sp|Q6X6Z7|TEKT3_MOUSE Tektin-3
Length = 490
Score = 233 bits (594), Expect = 6e-61
Identities = 117/294 (39%), Positives = 179/294 (60%)
Frame = +2
Query: 29 VNSEFSHGIPSQLKRSLTTLPWNAATFYKSSTISPSISLLNSQTAPLCGKTALGELEGLK 208
+ S + P + +LPW T+YK++ P+++ +S++ +C T L
Sbjct: 29 ITSSYKDRFPHRNLTHSLSLPWRPNTYYKTAYNYPTLAPYSSRSQRVCESTMLP------ 82
Query: 209 VPPVFSAARNALYTRYTPKDWMTAAMKTFQSADRVRDYGERIRFDTNRLGRETDDQTKRA 388
F + R +TRYTP DW + + +FQ ++ R ER+R DT+RL ++ Q ++
Sbjct: 83 ----FVSNRTTFFTRYTPDDWYRSNLVSFQESNSSRHNSERLRVDTSRLIQDKYQQIRKT 138
Query: 389 QEDVGKKIGDKLSDTNFWKTELDDEIDKMITENNNLNEMKRVAEKMFGETENQLHIGEEC 568
Q + +G++++D FWK+E+ E+D+MI E N L ++KR E+ ETE L + EC
Sbjct: 139 QAHSTQNLGERVNDLAFWKSEITHELDEMIGETNALTDIKRRLERGLIETEGPLQVSREC 198
Query: 569 LYTREKRQGIDLVHDNVEKSLIGEIDTVKKAQDDIRNVINKANAQMSLNRAAQHENELDS 748
L+ REKR GIDLVHD EK L+ E+DT+ Q+ +R ++KANAQ++ +R+AQHE E D
Sbjct: 199 LFHREKRMGIDLVHDEAEKELLAEVDTILCCQERMRQHLDKANAQLASDRSAQHELEKDL 258
Query: 749 RDKFIAQQIDENAHQIKNSSAGINFHNGVETIDNCVSTPETWAKFTDDNVKRSQ 910
DK A +ID+ ++N+S G+++ GVE +D VS PETWAKFTDDNV RSQ
Sbjct: 259 SDKQAALRIDDKCQHLRNTSEGVSYFRGVERVDATVSVPETWAKFTDDNVLRSQ 312
>sp|Q9BXF9|TEKT3_HUMAN Tektin-3
Length = 490
Score = 231 bits (590), Expect = 2e-60
Identities = 119/284 (41%), Positives = 179/284 (63%)
Frame = +2
Query: 59 SQLKRSLTTLPWNAATFYKSSTISPSISLLNSQTAPLCGKTALGELEGLKVPPVFSAARN 238
S L SL+ LPW +T+YK ++ SPS+ AP C ++ E +P F + R
Sbjct: 40 SNLTHSLS-LPWRPSTYYKVASNSPSV-------APYCTRSQRVS-ENTMLP--FVSNRT 88
Query: 239 ALYTRYTPKDWMTAAMKTFQSADRVRDYGERIRFDTNRLGRETDDQTKRAQEDVGKKIGD 418
+TRYTP DW + + +Q ++ R E++R DT+RL ++ QT++ Q D + +G+
Sbjct: 89 TFFTRYTPDDWYRSNLTNYQESNTSRHNSEKLRVDTSRLIQDKYQQTRKTQADTTQNLGE 148
Query: 419 KLSDTNFWKTELDDEIDKMITENNNLNEMKRVAEKMFGETENQLHIGEECLYTREKRQGI 598
+++D FWK+E+ E+D+MI E N L ++K+ E+ ETE L + ECL+ REKR GI
Sbjct: 149 RVNDIGFWKSEIIHELDEMIGETNALTDVKKRLERALMETEAPLQVARECLFHREKRMGI 208
Query: 599 DLVHDNVEKSLIGEIDTVKKAQDDIRNVINKANAQMSLNRAAQHENELDSRDKFIAQQID 778
DLVHD VE L+ E+DT+ Q+ ++ ++KA AQ++ NRA+QHE E D DK A +ID
Sbjct: 209 DLVHDEVEAQLLTEVDTILCCQERMKLHLDKAIAQLAANRASQHELEKDLSDKQTAYRID 268
Query: 779 ENAHQIKNSSAGINFHNGVETIDNCVSTPETWAKFTDDNVKRSQ 910
+ H ++N+S G+ + GVE +D VS PE+WAKFTDDN+ RSQ
Sbjct: 269 DKCHHLRNTSDGVGYFRGVERVDATVSVPESWAKFTDDNILRSQ 312
>sp|Q9DAJ2|TEKT1_MOUSE Tektin-1
Length = 418
Score = 147 bits (370), Expect = 5e-35
Identities = 76/219 (34%), Positives = 124/219 (56%)
Frame = +2
Query: 251 RYTPKDWMTAAMKTFQSADRVRDYGERIRFDTNRLGRETDDQTKRAQEDVGKKIGDKLSD 430
R+ P++W A + A+ R ER+ ++ RL E + T+++Q DV KK+ +L +
Sbjct: 10 RFLPEEWYIANKSQYHRAEAQRSQSERLVAESQRLVEEIEKTTRKSQSDVNKKLEQRLEE 69
Query: 431 TNFWKTELDDEIDKMITENNNLNEMKRVAEKMFGETENQLHIGEECLYTREKRQGIDLVH 610
FWK ELDD++++++ + ++L K E+ + LHI E+CL REKR GIDLVH
Sbjct: 70 VRFWKKELDDKLEQLVNQTDDLLTYKTRLERSLESYKEPLHITEKCLEYREKRVGIDLVH 129
Query: 611 DNVEKSLIGEIDTVKKAQDDIRNVINKANAQMSLNRAAQHENELDSRDKFIAQQIDENAH 790
D VE+ L E D + + + + ++ Q+ LNR+A++ E D RDKF A ID+
Sbjct: 130 DVVEQELQKEADIIHGVMNLLIRTLEESTEQIRLNRSAKYNLEKDLRDKFTAITIDDVCF 189
Query: 791 QIKNSSAGINFHNGVETIDNCVSTPETWAKFTDDNVKRS 907
+ N+S INF V I+ + E W F++ NV+++
Sbjct: 190 SLNNNSPNINFSEKVVRIEPNSVSLEDWLDFSNANVEKA 228
Score = 40.4 bits (93), Expect = 0.007
Identities = 28/148 (18%), Positives = 63/148 (42%)
Frame = +2
Query: 263 KDWMTAAMKTFQSADRVRDYGERIRFDTNRLGRETDDQTKRAQEDVGKKIGDKLSDTNFW 442
+DW+ + + AD+ + ++ +++ +T + +R E V + + L +T
Sbjct: 215 EDWLDFSNANVEKADKQLNNSTALKTLVDQILSQTANDLRRQCEVVDEAFINGLKETKDA 274
Query: 443 KTELDDEIDKMITENNNLNEMKRVAEKMFGETENQLHIGEECLYTREKRQGIDLVHDNVE 622
+ +L D + K++ E + + E + E + L TR R ++L D +
Sbjct: 275 RNKLADHLAKVMEEIASQEKNIMALENAITQQEGPAKVAHTRLETRTHRPNVELCRDIAQ 334
Query: 623 KSLIGEIDTVKKAQDDIRNVINKANAQM 706
LI EI + ++ + +A Q+
Sbjct: 335 YRLIKEIQEINHNVARLKETLAQAQTQL 362
>sp|Q969V4|TEKT1_HUMAN Tektin-1
Length = 418
Score = 142 bits (357), Expect = 2e-33
Identities = 77/220 (35%), Positives = 122/220 (55%), Gaps = 1/220 (0%)
Frame = +2
Query: 251 RYTPKDWMTAAMKTFQSADRVRDYGERIRFDTNRLGRETDDQTKRAQEDVGKKIGDKLSD 430
++ P +W A + AD R ER+ ++ RL E + T+++Q DV KK+ +L +
Sbjct: 10 KFLPSEWHIANKNQYHRADAQRSRSERLVAESQRLVDEIEKTTRKSQSDVNKKLEQRLEE 69
Query: 431 TNFWKTELDDEIDKMITENNNLNEMKRVAEKMFGETENQLHIGEECLYTREKRQGIDLVH 610
FWK ELDD++++++ ++L K EK + LHI E CL REKR GIDLVH
Sbjct: 70 VQFWKKELDDKLEQLVNVTDDLLIYKIRLEKALETLKEPLHITETCLAYREKRIGIDLVH 129
Query: 611 DNVEKSLIGEIDTVKKAQDDIRNVINKANAQMSLNRAAQHENELDSRDKFIAQQIDENAH 790
D VE LI E + ++ + + +A+ Q+ +NR+A++ E D +DKF+A ID+
Sbjct: 130 DTVEHELIKEAEIIQGIMALLTRTLEEASEQIRMNRSAKYNLEKDLKDKFVALTIDDICF 189
Query: 791 QIKNSSAGINF-HNGVETIDNCVSTPETWAKFTDDNVKRS 907
+ N+S I + N V N VS E W F+ NV+++
Sbjct: 190 SLNNNSPNIRYSENAVRIEPNSVSL-EDWLDFSSTNVEKA 228
Score = 43.1 bits (100), Expect = 0.001
Identities = 33/174 (18%), Positives = 75/174 (43%)
Frame = +2
Query: 263 KDWMTAAMKTFQSADRVRDYGERIRFDTNRLGRETDDQTKRAQEDVGKKIGDKLSDTNFW 442
+DW+ + + AD+ R+ ++ +R+ +T + ++ + V + L DT
Sbjct: 215 EDWLDFSSTNVEKADKQRNNSLMLKALVDRILSQTANDLRKQCDVVDTAFKNGLKDTKDA 274
Query: 443 KTELDDEIDKMITENNNLNEMKRVAEKMFGETENQLHIGEECLYTREKRQGIDLVHDNVE 622
+ +L D + K++ E + + EK + E + L TR R ++L D +
Sbjct: 275 RDKLADHLAKVMEEIASQEKNITALEKAILDQEGPAKVAHTRLETRTHRPNVELCRDVAQ 334
Query: 623 KSLIGEIDTVKKAQDDIRNVINKANAQMSLNRAAQHENELDSRDKFIAQQIDEN 784
L+ E+ + ++ + +A A++ H +L +++ Q+ EN
Sbjct: 335 YRLMKEVQEITHNVARLKETLAQAQAELK----GLHRRQLALQEEI---QVKEN 381
>sp|Q99JD2|TEKT1_RAT Tektin-1
Length = 418
Score = 140 bits (352), Expect = 6e-33
Identities = 72/219 (32%), Positives = 120/219 (54%)
Frame = +2
Query: 251 RYTPKDWMTAAMKTFQSADRVRDYGERIRFDTNRLGRETDDQTKRAQEDVGKKIGDKLSD 430
++ P +W A + A+ R ER+ ++ RL E + T+++Q DV KK+ +L +
Sbjct: 10 KFLPAEWYIANKSQYHRAEAQRSRSERLVAESQRLVEEIEKTTRKSQSDVNKKLEQRLEE 69
Query: 431 TNFWKTELDDEIDKMITENNNLNEMKRVAEKMFGETENQLHIGEECLYTREKRQGIDLVH 610
FWK ELDD+++ ++ E +L K E+ + LHI E+CL REKR GIDLVH
Sbjct: 70 VKFWKKELDDKLEHLVNETEDLLTYKIRLERSLESYKEPLHITEKCLAYREKRVGIDLVH 129
Query: 611 DNVEKSLIGEIDTVKKAQDDIRNVINKANAQMSLNRAAQHENELDSRDKFIAQQIDENAH 790
D V++ L E D + + + + +A Q+ LNR+A++ E D +DKF A ID+
Sbjct: 130 DVVDQELQKEADIIHGVMNLLTRTVEEATEQIRLNRSAKYNLEKDLKDKFTAITIDDICF 189
Query: 791 QIKNSSAGINFHNGVETIDNCVSTPETWAKFTDDNVKRS 907
+ N+S I + V I+ + E W F++ N++++
Sbjct: 190 SLNNNSPDIKYSENVVRIEPNSVSLEDWLDFSNTNMQKA 228
Score = 41.2 bits (95), Expect = 0.004
Identities = 29/148 (19%), Positives = 62/148 (41%)
Frame = +2
Query: 263 KDWMTAAMKTFQSADRVRDYGERIRFDTNRLGRETDDQTKRAQEDVGKKIGDKLSDTNFW 442
+DW+ + Q AD+ + ++ +++ +T + +R E V + L +T
Sbjct: 215 EDWLDFSNTNMQKADKQLNNSMALKTLVDQILSQTANDLRRQCEVVDTAFVNGLKETKDA 274
Query: 443 KTELDDEIDKMITENNNLNEMKRVAEKMFGETENQLHIGEECLYTREKRQGIDLVHDNVE 622
+ +L D + K++ E + + V E + E + L R R ++L D +
Sbjct: 275 RNKLADHLAKVMDEIASQEKNIEVLENAITQQEGPAKVAHTRLENRTYRPNVELCRDVAQ 334
Query: 623 KSLIGEIDTVKKAQDDIRNVINKANAQM 706
LI E+ +K + + +A Q+
Sbjct: 335 YRLIREVQEIKHNVARLEETLAQAQIQL 362
>sp|Q922G7|TEKT2_MOUSE Tektin-2 (Testicular tektin) (Tektin-t)
Length = 430
Score = 95.5 bits (236), Expect = 2e-19
Identities = 59/220 (26%), Positives = 105/220 (47%)
Frame = +2
Query: 251 RYTPKDWMTAAMKTFQSADRVRDYGERIRFDTNRLGRETDDQTKRAQEDVGKKIGDKLSD 430
RY DW T + +A+R RD +IR + L ET++Q + D ++ +++
Sbjct: 11 RYRLSDWRTNSYLLSTNAERQRDASHQIRQEARILRNETNNQIVWDEHDNRTRLAERIDT 70
Query: 431 TNFWKTELDDEIDKMITENNNLNEMKRVAEKMFGETENQLHIGEECLYTREKRQGIDLVH 610
N WK LD + + E ++L + K AE+ L + ECL RE R+ ID+V
Sbjct: 71 VNRWKETLDKCLTDLDAEIDSLAQAKESAEQNLQAKNLPLDVAIECLTLRESRRDIDVVR 130
Query: 611 DNVEKSLIGEIDTVKKAQDDIRNVINKANAQMSLNRAAQHENELDSRDKFIAQQIDENAH 790
D VE+ L+ E++ ++ + ++ I++A + L + + + D RDK +ID
Sbjct: 131 DPVEEELLKEVEVIEATKKVLQEKISQAFQHLCLLQEIRQQLNSDHRDKMETLEIDRGCL 190
Query: 791 QIKNSSAGINFHNGVETIDNCVSTPETWAKFTDDNVKRSQ 910
+ +S I+ I +T + W +FT N R++
Sbjct: 191 SLNLTSPNISLKVNPTRIPKDSTTLQQWDEFTRFNKNRAE 230
>sp|Q6AYM2|TEKT2_RAT Tektin-2 (Testicular tektin) (Tektin-t)
Length = 430
Score = 93.6 bits (231), Expect = 7e-19
Identities = 56/219 (25%), Positives = 104/219 (47%)
Frame = +2
Query: 251 RYTPKDWMTAAMKTFQSADRVRDYGERIRFDTNRLGRETDDQTKRAQEDVGKKIGDKLSD 430
RY DW+T + +A+R RD +IR + L ET++QT + D ++ +++
Sbjct: 11 RYRLSDWLTNSYLLSTNAERQRDASHQIRQEARILRNETNNQTVWDEHDNRTRLAERIDT 70
Query: 431 TNFWKTELDDEIDKMITENNNLNEMKRVAEKMFGETENQLHIGEECLYTREKRQGIDLVH 610
N WK LD + + E ++L + K E+ L + ECL RE R+ ID+V
Sbjct: 71 VNRWKEMLDKCLTDLDAEIDSLTQAKESVEQSLQAKNLPLDVAIECLTLRESRRDIDVVK 130
Query: 611 DNVEKSLIGEIDTVKKAQDDIRNVINKANAQMSLNRAAQHENELDSRDKFIAQQIDENAH 790
D VE+ L+ E++ ++ + ++ I++A + L + + + D RDK +ID
Sbjct: 131 DPVEEELMKEVEVIEATKKVLQEKISQAFQHLCLLQEIRQQLNSDHRDKMETLEIDRGCL 190
Query: 791 QIKNSSAGINFHNGVETIDNCVSTPETWAKFTDDNVKRS 907
+ ++ ++ + +T + W FT N R+
Sbjct: 191 SLNLTAPNLSLKVNPTRVPKDSTTLQEWDDFTRFNKNRA 229
>sp|Q9UIF3|TEKT2_HUMAN Tektin-2 (Testicular tektin) (Tektin-t) (Testicular tektin B1-like
protein) (Tektin-B1) (TEKTB1)
Length = 430
Score = 86.3 bits (212), Expect = 1e-16
Identities = 57/220 (25%), Positives = 101/220 (45%)
Frame = +2
Query: 251 RYTPKDWMTAAMKTFQSADRVRDYGERIRFDTNRLGRETDDQTKRAQEDVGKKIGDKLSD 430
R+ DW T + +A RD +IR + L ET++QT + D ++ +++
Sbjct: 11 RFQLPDWHTNSYLLSTNAQLQRDASHQIRQEARVLRNETNNQTIWDEHDNRTRLVERIDT 70
Query: 431 TNFWKTELDDEIDKMITENNNLNEMKRVAEKMFGETENQLHIGEECLYTREKRQGIDLVH 610
N WK LD + + E + L +MK AE+ L + ECL RE R+ ID+V
Sbjct: 71 VNRWKEMLDKCLTDLDAEIDALTQMKESAEQNLQAKNLPLDVAIECLTLRESRRDIDVVK 130
Query: 611 DNVEKSLIGEIDTVKKAQDDIRNVINKANAQMSLNRAAQHENELDSRDKFIAQQIDENAH 790
D VE L E++ ++ + ++ +++A Q+ L + Q + D R K +ID
Sbjct: 131 DPVEDELHKEVEVIEATKKALQQKVSQAFEQLCLLQEVQQQLNSDHRGKMETLEIDRGCL 190
Query: 791 QIKNSSAGINFHNGVETIDNCVSTPETWAKFTDDNVKRSQ 910
+ S I+ + + +T + W F+ N R++
Sbjct: 191 SLNLRSPNISLKVDPTRVPDGSTTLQQWDDFSRFNKDRAE 230
>sp|Q26648|TKB1_STRPU Tektin-B1
Length = 400
Score = 70.5 bits (171), Expect = 6e-12
Identities = 43/167 (25%), Positives = 78/167 (46%)
Frame = +2
Query: 407 KIGDKLSDTNFWKTELDDEIDKMITENNNLNEMKRVAEKMFGETENQLHIGEECLYTREK 586
++ +++ D W+ L+ + + E L E K +AE+ L + EC R+
Sbjct: 36 RLSNRIDDIETWRETLEKTLADVDEEIRKLEEDKDLAERALEAKALPLDVASECKTLRDG 95
Query: 587 RQGIDLVHDNVEKSLIGEIDTVKKAQDDIRNVINKANAQMSLNRAAQHENELDSRDKFIA 766
R+ D+V D + EID ++ +D ++ ++ A Q+ L + A+ + D RDK A
Sbjct: 96 RRDNDVVDDLANSEVGKEIDVIEGIKDALQAKVSSAFEQLCLLQEARQQLHADLRDKTEA 155
Query: 767 QQIDENAHQIKNSSAGINFHNGVETIDNCVSTPETWAKFTDDNVKRS 907
++ID H + SS I + +TP+TW F+ N R+
Sbjct: 156 KKIDTYCHDLTISSPDICYQPNSTRTPKGSTTPQTWEDFSRYNKDRA 202
>sp|O93308|SMC1A_XENLA Structural maintenance of chromosome 1 protein (xSMC1)
Length = 1232
Score = 40.0 bits (92), Expect = 0.009
Identities = 35/171 (20%), Positives = 78/171 (45%), Gaps = 8/171 (4%)
Frame = +2
Query: 287 KTFQSADRVR-DYGERIRFDTNRLGRET---DDQTK---RAQEDVGKKIGDKLSDTNFWK 445
K S ++ R ++ ER+ ++ GR+ ++Q K R +E+ K+ + +
Sbjct: 338 KEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFN 397
Query: 446 TELDDEIDKM-ITENNNLNEMKRVAEKMFGETENQLHIGEECLYTREKRQGIDLVHDNVE 622
+ + D++ + E + ++ +K+ ENQ I + Y +Q ++ N+E
Sbjct: 398 RDQKADQDRLDLEERKKVETEAKIKQKLRELEENQKRIEKLEEYIATSKQSLE-EQKNLE 456
Query: 623 KSLIGEIDTVKKAQDDIRNVINKANAQMSLNRAAQHENELDSRDKFIAQQI 775
++L E++ K+ D+I + +N+ Q+ R + E+ R I + I
Sbjct: 457 ETLTEEVEMAKRRIDEINSELNQVMEQLGDARIDRQESSRQQRKAEIMESI 507
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,711,950
Number of Sequences: 369166
Number of extensions: 1972373
Number of successful extensions: 7093
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7078
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9270587090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)