Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_025_P16
(821 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P53990|K0174_HUMAN Protein KIAA0174 (Putative MAPK-activ... 200 3e-51
sp|P53843|YN05_YEAST Hypothetical 34.5 kDa protein in PIK1-... 88 3e-17
sp|O43313|Y0431_HUMAN Hypothetical protein KIAA0431 34 0.42
sp|Q12446|LAS17_YEAST Proline-rich protein LAS17 33 0.95
sp|Q6UB99|ANR11_HUMAN Ankyrin repeat domain protein 11 (Ank... 33 1.2
sp|O95466|FMNL_HUMAN Formin-like 1 protein (Formin-like pro... 31 3.6
sp|Q8CHI5|PER1_RAT Period circadian protein 1 (rPER1) 31 3.6
sp|Q15562|TEAD2_HUMAN Transcriptional enhancer factor TEF-4... 31 4.7
sp|Q9JL26|FMNL_MOUSE Formin-like 1 protein (Formin-related ... 31 4.7
sp|Q8A8C3|DNAJ_BACTN Chaperone protein dnaJ 30 6.1
>sp|P53990|K0174_HUMAN Protein KIAA0174 (Putative MAPK-activating protein PM28)
Length = 364
Score = 200 bits (509), Expect = 3e-51
Identities = 122/306 (39%), Positives = 168/306 (54%), Gaps = 35/306 (11%)
Frame = +2
Query: 2 EIALKSRKEIADYLTSAKYDRARIKVEMIIRQDYLVEVYELIEMFCDLLLARFGLIECQK 181
E+A K+RKEIADYL + K +RARI+VE IIR+DYLVE E++E++CDLLLARFGLI+ K
Sbjct: 31 ELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMK 90
Query: 182 EIDPGLEEQIATLIWVTPRLQTDVQELKLITDQLHLKYGREYGLACQSNSLNNVNEKVME 361
E+D GL E ++TLIW PRLQ++V ELK++ DQL KY +EYG C++N + VN+++M
Sbjct: 91 ELDSGLAESVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMH 150
Query: 362 KLSIKAPPKRLVEQYLVEIAKSFDVPYEPEEDIDPPASNWNPGEFYAPLPPNLIDF-MGE 538
KLS++APPK LVE+YL+EIAK+++VPYEP+ + A PG + +LID +
Sbjct: 151 KLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAP---PG-----VETDLIDVGFTD 202
Query: 539 KPPLINPNAYXXXXXXXXXXXXXXXXXXXXXXXXXISNAPYPYP-QKKPLNDNEAPM--- 706
P +N P+ YP K P + N PM
Sbjct: 203 DVKKGGPGRGGSGGFTAPVGGPDGTVPMPMPMPMPSANTPFSYPLPKGPSDFNGLPMGTY 262
Query: 707 ------------SLPPKYEEFD----------------GSSSQESA--PPLPPNGPNDLF 796
+ PP YE D G + SA P P + ++
Sbjct: 263 QAFPNIHPPQIPATPPSYESVDDINADKNISSAQIVGPGPKPEASAKLPSRPADNYDNFV 322
Query: 797 LPEIPS 814
LPE+PS
Sbjct: 323 LPELPS 328
>sp|P53843|YN05_YEAST Hypothetical 34.5 kDa protein in PIK1-POL2 intergenic region
Length = 298
Score = 87.8 bits (216), Expect = 3e-17
Identities = 62/194 (31%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Frame = +2
Query: 5 IALKSRKEIADYLTSAKYDRARIKVEMIIRQDYLVEVYELIEMFCDLLLARFGLIE---- 172
IA +SR+++A L + K +A +VE +I D +E+ E++E++C+LLLAR +I
Sbjct: 33 IAKQSRRQVAQLLLTNKEQKAHYRVETLIHDDIHIELLEILELYCELLLARVQVINDIST 92
Query: 173 ----CQKEIDPGLEEQIATLIWVTPRLQTDVQELKLITDQLHLKYGREYGLACQSNSLNN 340
++ +D G+ E I +LI+ +V+EL + D + K E+ ++ + +
Sbjct: 93 EEQLVKEHMDDGINEAIRSLIYAI-LFVDEVKELSQLKDLMAWKINVEFVNGVIADHI-D 150
Query: 341 VNEKVMEKLSIKAPPKRLVEQYLVEIAKSFDVPYEPEEDIDPPASNWNPGEFYAPLPPNL 520
V EK+++K S P + LV+ YL EIAK++DVPY E+ +S+ +F P ++
Sbjct: 151 VPEKIIKKCSPSVPKEELVDLYLKEIAKTYDVPYSKLENSLSSSSSNISSDFSDP-SGDI 209
Query: 521 IDFMGEKPPLINPN 562
D EKP L N
Sbjct: 210 EDNDEEKPILALDN 223
>sp|O43313|Y0431_HUMAN Hypothetical protein KIAA0431
Length = 667
Score = 34.3 bits (77), Expect = 0.42
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 644 ISNAPYPYPQKKPLNDNEAPMSLPPKYEEFDGSSSQESAPPLPPNGPNDLFLPE 805
++N P P P + L +E + L P +E+ GS++ + PP P L LP+
Sbjct: 91 LNNQPIPRPDTQELEASE--IKLEPSFEDSCGSNTDKQTLTTPPRYPQKLLLPK 142
>sp|Q12446|LAS17_YEAST Proline-rich protein LAS17
Length = 633
Score = 33.1 bits (74), Expect = 0.95
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 659 YPYPQKKPLNDNEAPMSLPPKYEEFDGSSSQESAPPLPPNGPNDLFLPEIPSDQ 820
+P PL + AP+ PP++ S Q +AP P + P +PEIPS Q
Sbjct: 234 HPKHSLPPLPNQFAPLPDPPQHN----SPPQNNAPSQPQSNPFPFPIPEIPSTQ 283
>sp|Q6UB99|ANR11_HUMAN Ankyrin repeat domain protein 11 (Ankyrin repeat-containing cofactor
1)
Length = 2664
Score = 32.7 bits (73), Expect = 1.2
Identities = 28/73 (38%), Positives = 33/73 (45%), Gaps = 16/73 (21%)
Frame = +2
Query: 647 SNAPYPYPQKKPLNDNEAPMSLP---PKYEEF-DGS-------SSQESAPPLPPNGPNDL 793
S APYP P P AP +LP P E+ DG S+ E+AP PP+G
Sbjct: 2012 SEAPYPAPPASP-----APYALPVAEPGLEDVKDGVDAVPAAISTSEAAPYAPPSGLESF 2066
Query: 794 F-----LPEIPSD 817
F LPE P D
Sbjct: 2067 FSNCKSLPEAPLD 2079
>sp|O95466|FMNL_HUMAN Formin-like 1 protein (Formin-like protein) (Leukocyte formin)
(CLL-associated antigen KW-13)
Length = 1100
Score = 31.2 bits (69), Expect = 3.6
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 653 APYPYPQKKPL-NDNEAPMSLPPKYEEFDGSSSQESAPPLPPNGP 784
AP P P L + EAP S PP+ GS APPLP + P
Sbjct: 541 APPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLP 585
>sp|Q8CHI5|PER1_RAT Period circadian protein 1 (rPER1)
Length = 1244
Score = 31.2 bits (69), Expect = 3.6
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 644 ISNAPYPYPQKKPLNDNEAPMSLPPKYEEFDGSSSQESAPPLPPNGPN 787
+ N +P P P ++AP+ PP S S PP PP+ P+
Sbjct: 919 LPNYLFPSPTSYPYGVSQAPVEGPPTPASHSPSPSLPPPPPSPPHRPD 966
>sp|Q15562|TEAD2_HUMAN Transcriptional enhancer factor TEF-4 (TEA domain family member 2)
(TEAD-2)
Length = 447
Score = 30.8 bits (68), Expect = 4.7
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +2
Query: 647 SNAPYPYPQKKPLNDNEAPMSLPPKYEEFDGSSSQESAPPLPPNGPN 787
S P+ P KP + +SL P + G ++ PLPP P+
Sbjct: 168 SGPPWNVPDVKPFSQTPFTLSLTPPSTDLPGYEPPQALSPLPPPTPS 214
>sp|Q9JL26|FMNL_MOUSE Formin-like 1 protein (Formin-related protein)
Length = 1094
Score = 30.8 bits (68), Expect = 4.7
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = +2
Query: 647 SNAPYPYPQKKPL----NDNEAPMSLPPKYEEFDGSSSQESAPPLPPNGP 784
S P P P PL + EAP S PP G + APPLP + P
Sbjct: 536 SPPPPPPPPPPPLPNLQSQQEAPPSAPPLAPPLPGCAEPPPAPPLPGDLP 585
>sp|Q8A8C3|DNAJ_BACTN Chaperone protein dnaJ
Length = 396
Score = 30.4 bits (67), Expect = 6.1
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -3
Query: 810 GISGRNRSFGPFGGNGG-ALS*DEEPSN-SSYFGGKLMGASLSFNGF 676
G+SG + GPFGG GG +S D+ S FGG+ G S F GF
Sbjct: 74 GVSGAAGNGGPFGGFGGEGMSMDDIFSMFGDIFGGRGGGFSGGFGGF 120
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,994,834
Number of Sequences: 369166
Number of extensions: 1972061
Number of successful extensions: 6124
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6094
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7907893860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)