Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_025_L15
(382 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O88910|MPP3_MOUSE MAGUK p55 subfamily member 3 (MPP3 pro... 74 1e-13
sp|P49697|EM55_FUGRU 55 kDa erythrocyte membrane protein (p... 73 2e-13
sp|Q00013|EM55_HUMAN 55 kDa erythrocyte membrane protein (p... 73 2e-13
sp|Q13368|MPP3_HUMAN MAGUK p55 subfamily member 3 (MPP3 pro... 72 3e-13
sp|Q9JLB2|MPP5_MOUSE MAGUK p55 subfamily member 5 (Protein ... 72 4e-13
sp|Q5RDQ2|MPP5_PONPY MAGUK p55 subfamily member 5 72 4e-13
sp|Q8N3R9|MPP5_HUMAN MAGUK p55 subfamily member 5 72 4e-13
sp|P70290|EM55_MOUSE 55 kDa erythrocyte membrane protein (p... 72 5e-13
sp|Q8JHF4|MPP5_BRARE MAGUK p55 subfamily member 5 (Nagie ok... 72 5e-13
sp|Q62915|CSKP_RAT Peripheral plasma membrane protein CASK ... 71 7e-13
>sp|O88910|MPP3_MOUSE MAGUK p55 subfamily member 3 (MPP3 protein) (Dlgh3 protein)
Length = 568
Score = 73.9 bits (180), Expect = 1e-13
Identities = 33/72 (45%), Positives = 51/72 (70%)
Frame = +3
Query: 117 KVYMRALFDYDPSKDKLLPAEQIGLAFKAGDVFEVLNRDDPSFWQAVPLDSVDNQAFLIP 296
KV+MRALF YDP +D+ +P ++ GL F+ V EV+++DDP++WQA + + +A LIP
Sbjct: 228 KVFMRALFHYDpreDRAIPCQEAGLPFQRRQVLEVVSQDDPTWWQAKRVGDTNLRAGLIP 287
Query: 297 SQSLQERLIALR 332
S+ QER ++ R
Sbjct: 288 SKQFQERRLSYR 299
>sp|P49697|EM55_FUGRU 55 kDa erythrocyte membrane protein (p55) (Membrane protein,
palmitoylated 1)
Length = 467
Score = 72.8 bits (177), Expect = 2e-13
Identities = 32/71 (45%), Positives = 48/71 (67%)
Frame = +3
Query: 102 RSNVEKVYMRALFDYDPSKDKLLPAEQIGLAFKAGDVFEVLNRDDPSFWQAVPLDSVDNQ 281
RS ++YMR FDYDP+ D L+P ++ GL F+ GD+ +++N+ DP++WQ ++ N
Sbjct: 157 RSKPCEMYMRGQFDYDPAMDDLIPCKEAGLKFQTGDIIQIINKQDPNWWQGRVENNAANF 216
Query: 282 AFLIPSQSLQE 314
A LIPS LQE
Sbjct: 217 AGLIPSPELQE 227
>sp|Q00013|EM55_HUMAN 55 kDa erythrocyte membrane protein (p55) (Membrane protein,
palmitoylated 1)
Length = 466
Score = 72.8 bits (177), Expect = 2e-13
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Frame = +3
Query: 117 KVYMRALFDYDPSKDKLLPAEQIGLAFKAGDVFEVLNRDDPSFWQAVPLDSVDNQAFLIP 296
+++MRA FDYDP KD L+P ++ GL F GD+ +++N+DD ++WQ S A LIP
Sbjct: 160 QMFMRAQFDYDPKKDNLIPCKEAGLKFATGDIIQIINKDDSNWWQGRVEGSSKESAGLIP 219
Query: 297 SQSLQERLIALRNDLKPQSNDNIS--GKPK 380
S LQE +A P + S GK K
Sbjct: 220 SPELQEWRVASMAQSAPSEAPSCSPFGKKK 249
>sp|Q13368|MPP3_HUMAN MAGUK p55 subfamily member 3 (MPP3 protein) (Discs large homolog 3)
Length = 585
Score = 72.4 bits (176), Expect = 3e-13
Identities = 33/77 (42%), Positives = 52/77 (67%)
Frame = +3
Query: 102 RSNVEKVYMRALFDYDPSKDKLLPAEQIGLAFKAGDVFEVLNRDDPSFWQAVPLDSVDNQ 281
R KV+MRALF Y+P +D+ +P ++ GL F+ V EV+++DDP++WQA + + +
Sbjct: 223 RLKESKVFMRALFHYNpreDRAIPCQEAGLPFQRRQVLEVVSQDDPTWWQAKRVGDTNLR 282
Query: 282 AFLIPSQSLQERLIALR 332
A LIPS+ QER ++ R
Sbjct: 283 AGLIPSKGFQERRLSYR 299
>sp|Q9JLB2|MPP5_MOUSE MAGUK p55 subfamily member 5 (Protein associated with Lin-7 1)
Length = 675
Score = 72.0 bits (175), Expect = 4e-13
Identities = 32/87 (36%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Frame = +3
Query: 120 VYMRALFDYDPSKDKLLPAEQIGLAFKAGDVFEVLNRDDPSFWQAVPLDSVDNQ--AFLI 293
++++A FDYDPS D +P ++GL+F+ GD+ V++++DP++WQA DNQ A L+
Sbjct: 348 IHVKAHFDYDPSDDPYVPCRELGLSFQKGDILHVISQEDPNWWQAYREGDEDNQPLAGLV 407
Query: 294 PSQSLQERLIALRNDLKPQSNDNISGK 374
P +S Q++ A++ ++ SGK
Sbjct: 408 PGKSFQQQREAMKQTIEEDKEPEKSGK 434
>sp|Q5RDQ2|MPP5_PONPY MAGUK p55 subfamily member 5
Length = 675
Score = 72.0 bits (175), Expect = 4e-13
Identities = 32/87 (36%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Frame = +3
Query: 120 VYMRALFDYDPSKDKLLPAEQIGLAFKAGDVFEVLNRDDPSFWQAVPLDSVDNQ--AFLI 293
++++A FDYDPS D +P ++GL+F+ GD+ V++++DP++WQA DNQ A L+
Sbjct: 348 IHVKAHFDYDPSDDPYVPCRELGLSFQKGDILHVISQEDPNWWQAYREGDEDNQPLAGLV 407
Query: 294 PSQSLQERLIALRNDLKPQSNDNISGK 374
P +S Q++ A++ ++ SGK
Sbjct: 408 PGKSFQQQREAMKQTIEEDKEPEKSGK 434
>sp|Q8N3R9|MPP5_HUMAN MAGUK p55 subfamily member 5
Length = 675
Score = 72.0 bits (175), Expect = 4e-13
Identities = 32/87 (36%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Frame = +3
Query: 120 VYMRALFDYDPSKDKLLPAEQIGLAFKAGDVFEVLNRDDPSFWQAVPLDSVDNQ--AFLI 293
++++A FDYDPS D +P ++GL+F+ GD+ V++++DP++WQA DNQ A L+
Sbjct: 348 IHVKAHFDYDPSDDPYVPCRELGLSFQKGDILHVISQEDPNWWQAYREGDEDNQPLAGLV 407
Query: 294 PSQSLQERLIALRNDLKPQSNDNISGK 374
P +S Q++ A++ ++ SGK
Sbjct: 408 PGKSFQQQREAMKQTIEEDKEPEKSGK 434
>sp|P70290|EM55_MOUSE 55 kDa erythrocyte membrane protein (p55) (Membrane protein,
palmitoylated 1) (Palmytoylated protein p55)
Length = 466
Score = 71.6 bits (174), Expect = 5e-13
Identities = 32/70 (45%), Positives = 46/70 (65%)
Frame = +3
Query: 117 KVYMRALFDYDPSKDKLLPAEQIGLAFKAGDVFEVLNRDDPSFWQAVPLDSVDNQAFLIP 296
+++MRA FDYDP KD L+P ++ GL F GD+ +++N+DD ++WQ S A LIP
Sbjct: 160 QMFMRAQFDYDPQKDNLIPCKEAGLKFVTGDIIQIINKDDSNWWQGRVEGSSKESAGLIP 219
Query: 297 SQSLQERLIA 326
S LQE +A
Sbjct: 220 SPELQEWRVA 229
>sp|Q8JHF4|MPP5_BRARE MAGUK p55 subfamily member 5 (Nagie oko protein) (MAGUK family
factor)
Length = 677
Score = 71.6 bits (174), Expect = 5e-13
Identities = 32/87 (36%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Frame = +3
Query: 120 VYMRALFDYDPSKDKLLPAEQIGLAFKAGDVFEVLNRDDPSFWQAVPLDSVDNQ--AFLI 293
V+++A FDYDPS D +P ++GL F+ GD+ ++++DDP++WQA DNQ A L+
Sbjct: 350 VHVKAHFDYDPSDDPYVPCRELGLCFQKGDILHIISQDDPNWWQAYRDGDEDNQPLAGLV 409
Query: 294 PSQSLQERLIALRNDLKPQSNDNISGK 374
P +S Q++ A++ ++ +GK
Sbjct: 410 PGKSFQQQREAMKQTIEEDKEPEKTGK 436
>sp|Q62915|CSKP_RAT Peripheral plasma membrane protein CASK
(Calcium/calmodulin-dependent serine protein kinase)
Length = 909
Score = 71.2 bits (173), Expect = 7e-13
Identities = 30/74 (40%), Positives = 51/74 (68%)
Frame = +3
Query: 105 SNVEKVYMRALFDYDPSKDKLLPAEQIGLAFKAGDVFEVLNRDDPSFWQAVPLDSVDNQA 284
+N +Y+RA F+YDP+KD L+P ++ G+ F+ GD+ +++++DD ++WQ +S + A
Sbjct: 598 NNSVSIYVRAQFEYDPAKDDLIPCKEAGIRFRVGDIIQIISKDDHNWWQGKLENSKNGTA 657
Query: 285 FLIPSQSLQERLIA 326
LIPS LQE +A
Sbjct: 658 GLIPSPELQEWRVA 671
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,077,242
Number of Sequences: 369166
Number of extensions: 888553
Number of successful extensions: 2183
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2152
length of database: 68,354,980
effective HSP length: 93
effective length of database: 51,174,625
effective search space used: 1688762625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)