Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_025_K20
(895 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P76052|ABGB_ECOLI Aminobenzoyl-glutamate utilization pro... 115 2e-25
sp|O34980|YTNL_BACSU Hypothetical protein ytnL 77 8e-14
sp|P55663|Y4TI_RHISN Hypothetical hydrolase Y4TI 74 5e-13
sp|P54983|AMHX_BACSU Amidohydrolase amhX (Aminoacylase) 66 1e-10
sp|P54968|ILR1_ARATH IAA-amino acid hydrolase 1 65 3e-10
sp|O50173|IAAH_ENTAG Indole-3-acetyl-aspartic acid hydrolas... 64 7e-10
sp|P54969|ILR3_ARATH IAA-amino acid hydrolase 3 precursor 60 6e-09
sp|P44765|ABGA_HAEIN Aminobenzoyl-glutamate utilization pro... 59 1e-08
sp|P58156|CBPX2_SULSO Thermostable carboxypeptidase 2 59 1e-08
sp|P54970|ILL2_ARATH IAA-amino acid hydrolase homolog 2 pre... 58 3e-08
>sp|P76052|ABGB_ECOLI Aminobenzoyl-glutamate utilization protein B
Length = 481
Score = 115 bits (287), Expect = 2e-25
Identities = 80/249 (32%), Positives = 121/249 (48%), Gaps = 20/249 (8%)
Frame = +3
Query: 177 NAIDKDAEELYALSNYLHCNPEISFNEYKAHDYICSYLEKKGFKVERHF-KLETGFVAVY 353
+AI+ D + +++ + +PE F E+ + +++ S LE GF V R+ + F+A +
Sbjct: 10 DAIEADRQRYTDIADQIWDHPETRFEEFWSAEHLASALESAGFTVTRNVGNIPNAFIASF 69
Query: 354 ETALQPHLVILVEMDALPII-----------------GHACGHNLIAECSVAAGIGLMQI 482
+P + +L E DAL + GH CGHNL+ + AA I + +
Sbjct: 70 GQG-KPVIALLGEYDALAGLSQQAGCAQPTSVTPGENGHGCGHNLLGTAAFAAAIAVKKW 128
Query: 483 MKTYNLKGKLSLLGTPGEEDWGGKIKYVSEGFFKDVDAAVMCHP-SIKNVVHKTHLALSQ 659
++ Y G + G PGEE GK V EG F DVDAA+ HP + + + LA Q
Sbjct: 129 LEQYGQGGTVRFYGCPGEEGGSGKTFMVREGVFDDVDAALTWHPEAFAGMFNTRTLANIQ 188
Query: 660 YKISFFGKEAHAAGSPWMGINALDAAVLAYQSVSCLRQQIHPDCRIN-GIFIHGGVSTNV 836
F G AHAA SP +G +ALDA L + L + I R++ I GG+S NV
Sbjct: 189 ASWRFKGIAAHAANSPHLGRSALDAVTLMTTGTNFLNEHIIEKARVHYAITNSGGISPNV 248
Query: 837 IPNYTEMEY 863
+ E+ Y
Sbjct: 249 VQAQAEVLY 257
>sp|O34980|YTNL_BACSU Hypothetical protein ytnL
Length = 416
Score = 76.6 bits (187), Expect = 8e-14
Identities = 74/252 (29%), Positives = 121/252 (48%), Gaps = 31/252 (12%)
Frame = +3
Query: 198 EELYALSNYLHCNPEISFNEYKAHDYICSYLEKKGFKVERHFKLETG-FVAVYETALQPH 374
++L + +LH PE+S E++ +I L++KG ++ R L+TG F + + P
Sbjct: 39 KQLIGIRRHLHQYPELSKEEFETTAFIKKCLKEKGIQI-RPTALKTGVFADIAGESEGPA 97
Query: 375 LVILVEMDALPI--------------IGHACGHNLIAECSVAAGIGLMQIMKTY--NLKG 506
+ + ++DALPI I HACGH+ AA +G ++K +LKG
Sbjct: 98 IALRADIDALPIEEKTGLPYASKHKGIMHACGHDF----HTAALLGAAFLLKENQDSLKG 153
Query: 507 KLSLLGTPGEEDWGGKIKYVSEGFFKDVDAAVMCHP----SIKNVVHKT---HLALSQYK 665
K+ LL P EE G K + +G +DA + H ++ V KT A+ ++K
Sbjct: 154 KIRLLFQPAEEAGAGATKVIEDGQLDGIDAVIGLHNKPDIAVGTVGLKTGPLMAAVDRFK 213
Query: 666 ISFFGKEAHAA-----GSPWMGINALDAAV--LAYQSVSCLRQQIHPDCRINGIFIHGGV 824
+ GK AHAA P +G + L A+ + ++V+ L+ I +IN GG
Sbjct: 214 VEIEGKGAHAALPHNGFDPIIGASQLIVALQTIVSRNVNPLQSAILTVGKIN-----GGS 268
Query: 825 STNVIPNYTEME 860
+ NVIP+ +E
Sbjct: 269 TWNVIPDTVVIE 280
>sp|P55663|Y4TI_RHISN Hypothetical hydrolase Y4TI
Length = 402
Score = 73.9 bits (180), Expect = 5e-13
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 32/269 (11%)
Frame = +3
Query: 150 SMNFKEVGFNAIDKDAEELYALSNYLHCNPEISFNEYKAHDYICSYLEKKGFKVERHFKL 329
+MNF+ I+ + + + L + +H PE+S NE+K I LE+ G K F
Sbjct: 4 AMNFRINNSLLIEAERDAVLELRHAMHREPELSNNEWKTQQRIRGMLERFGLKGATVFHN 63
Query: 330 ETGFVAVYETALQPHLVILV--EMDALPI---------------IGHACGHNLIAECSVA 458
++ + +A P + V ++DALPI + HACGH+L A S+A
Sbjct: 64 TGLYIDIEGSASGPKRAVAVRGDIDALPIQETRDDLPYQSHVEGVMHACGHDLHA--SIA 121
Query: 459 AGIGLMQIMKTYNLKGKLSLLGTPGE--EDWGGKIKYVSEGFFKDVDAAVMCH--PSI-- 620
G+ L N GKL + P E E GG+ + E + D AV H PSI
Sbjct: 122 MGVALAFHRMRNNFAGKLRVFFQPAEEAEPLGGR-TVLEERLLEGFDNAVGFHVTPSIQV 180
Query: 621 ------KNVVHKTHLALSQYKISFFGKEAHAAGSPWMGINALD-AAVLAYQSVSCLRQQI 779
+ V K+ Q+K++ G AH + +P GI+A+ AA + + +++
Sbjct: 181 GKFGAREGAVSKSS---DQFKVTVSGSAAHGS-TPHNGIDAITIAAAFVNEVQKVISREV 236
Query: 780 HPDCR--INGIFIHGGVSTNVIPNYTEME 860
D R I IHGG +TN+I ME
Sbjct: 237 PVDDRSVITIGTIHGGEATNIICPKVVME 265
>sp|P54983|AMHX_BACSU Amidohydrolase amhX (Aminoacylase)
Length = 389
Score = 66.2 bits (160), Expect = 1e-10
Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 23/230 (10%)
Frame = +3
Query: 222 YLHCNPEISFNEYKAHDYICSYLEKKGFKVERHFKLETGFVAVYETALQPHLVILVEMDA 401
+LH NPE+S+ EY+ ++ LE G + R F TG V + P + + ++DA
Sbjct: 18 HLHANPEVSWKEYETTSFLKQKLEDLGCRT-RTFSDCTGVVGEIGSG-SPVVAVRADIDA 75
Query: 402 L--PIIG-----HACGHNLIAECSVAAGIGLMQIMKTYNL-KGKLSLLGTPGEEDWGGKI 557
L + G H+CGH+ + ++A G LM + K L KG + + P EE GG +
Sbjct: 76 LWQEVNGTFRANHSCGHD--SHMTMALGT-LMLLKKQPELPKGTIRFIFQPAEEKGGGAL 132
Query: 558 KYVSEGFFKDVDAAV-------------MCHPSIKNVVHKTHLALSQYKISFFGKEAHAA 698
K + EG D+D C PSI H + + + G+EAH A
Sbjct: 133 KMIEEGVLDDIDYLYGVHVRPIQETQNGRCAPSI------LHGSSQHIEGTIIGEEAHGA 186
Query: 699 GSPWMGINALDAAVLAYQSVSCLR--QQIHPDCRINGIFIHGGVSTNVIP 842
P +G N+++ A + + QI ++ + GG S+N+IP
Sbjct: 187 -RPHLGKNSIEIAAFLVHKLGLIHIDPQIPHTVKMTKLQA-GGESSNIIP 234
>sp|P54968|ILR1_ARATH IAA-amino acid hydrolase 1
Length = 442
Score = 64.7 bits (156), Expect = 3e-10
Identities = 64/254 (25%), Positives = 118/254 (46%), Gaps = 27/254 (10%)
Frame = +3
Query: 198 EELYALSNYLHCNPEISFNEYKAHDYICSYLEKKGFKVERHFKLETGFVAVYETALQPHL 377
E + + +H NPE F E+K + L+ G K ++ +TG VA + +P
Sbjct: 50 EWMRGIRRKIHENPETGFQEFKTSQLVRDELDSLGVKY-KYPVAKTGVVAWIGSCSKPVF 108
Query: 378 VILVEMDALPIIG--------------HACGHNLIAECSVAAGIGLMQIMKT--YNLKGK 509
+ +MDALP+ HACGH + VA +G ++++T + +KG
Sbjct: 109 GLRADMDALPLQELVEWESKSKVDGKMHACGH----DTHVAMLLGAAKLLQTTKHLIKGT 164
Query: 510 LSLLGTPGEEDWGGKIKYVSEGFFKDVDAAVMCH--PSIKN--VVHKTHLALS---QYKI 668
+ L+ PGEE + G + + + D+D + H PSI + + + L+ + +
Sbjct: 165 VKLVFQPGEEGYAGAYEMLKDEILDDLDGILSVHVFPSIPSGGIGSRPGTVLAGAGLFTV 224
Query: 669 SFFGKEAHAAGSPWM--GINALDAAVLAYQSVSCLRQQIHP-DCRINGI-FIHGGVSTNV 836
+ G+ +HAA + + A +AV+A Q + + +++ P + + + +I GG + NV
Sbjct: 225 TVHGQGSHAATPHFSKDPVLAASSAVVALQQI--VSRELDPLEAGVVTVGYIEGGHAQNV 282
Query: 837 IPNYTEMEYEFELL 878
IP + F L
Sbjct: 283 IPQSAKFGGTFRSL 296
>sp|O50173|IAAH_ENTAG Indole-3-acetyl-aspartic acid hydrolase (IAA-Asp hydrolase)
Length = 436
Score = 63.5 bits (153), Expect = 7e-10
Identities = 61/208 (29%), Positives = 86/208 (41%), Gaps = 30/208 (14%)
Frame = +3
Query: 333 TGFVAVYETALQ-PHLVILVEMDAL---------------------PIIGHACGHNLIAE 446
TG VA +T P L V+MDAL P + HACGH +
Sbjct: 96 TGIVATLDTGRPGPTLAFRVDMDALDLNEDTDGHHRPFREDFASCNPGMMHACGH----D 151
Query: 447 CSVAAGIGLMQIMKTY--NLKGKLSLLGTPGEEDWGGKIKYVSEGFFKDVDAAVMCH--- 611
A G+GL ++K Y L G + L+ P EE G V+ G DVD H
Sbjct: 152 GHTAIGLGLAHVLKQYADRLHGVIKLIFQPAEEGTRGARAMVAAGVVDDVDYFTAIHIGT 211
Query: 612 --PSIKNVVHKTH-LALSQYKISFFGKEAHAAGSPWMGINALDAAVLAYQSVSCLRQQIH 782
P+ V + +A +++ F G AHA G P G NAL AA A ++ +
Sbjct: 212 GVPAGTVVCGSDNFMATTKFDALFTGVAAHAGGKPEDGRNALLAAAQAAIALHAIAPHSA 271
Query: 783 PDCRINGIFIHGGVSTNVIPNYTEMEYE 866
R+N + G NV+P+ ++ E
Sbjct: 272 GASRVNVGVMQAGTGRNVVPSGALLKVE 299
>sp|P54969|ILR3_ARATH IAA-amino acid hydrolase 3 precursor
Length = 438
Score = 60.5 bits (145), Expect = 6e-09
Identities = 53/197 (26%), Positives = 83/197 (42%), Gaps = 16/197 (8%)
Frame = +3
Query: 198 EELYALSNYLHCNPEISFNEYKAHDYICSYLEKKGFKVERHFKLETGFVAVYETALQPHL 377
+ + + +H NPE+ + E++ +I S L+ G K + TG + T P +
Sbjct: 48 DSMVRIRRKIHENPELGYEEFETSKFIRSELDLIGVKYRFPVAI-TGIIGYIGTGEPPFV 106
Query: 378 VILVEMDALPIIG--------------HACGHNLIAECSVAAGIGLMQIMKTY--NLKGK 509
+ +MDALPI HACGH + VA +G +I++ + +L+G
Sbjct: 107 ALRADMDALPIQEAVEWEHKSKNPGKMHACGH----DGHVAMLLGAAKILQQHRQHLQGT 162
Query: 510 LSLLGTPGEEDWGGKIKYVSEGFFKDVDAAVMCHPSIKNVVHKTHLALSQYKISFFGKEA 689
+ L+ P EE G EG K+V+A H S + FGK A
Sbjct: 163 VVLIFQPAEEGLSGAKMMREEGALKNVEAIFGIHLSPRTP---------------FGKAA 207
Query: 690 HAAGSPWMGINALDAAV 740
AGS G A +A +
Sbjct: 208 SLAGSFMAGAGAFEAVI 224
>sp|P44765|ABGA_HAEIN Aminobenzoyl-glutamate utilization protein A homolog
Length = 423
Score = 59.3 bits (142), Expect = 1e-08
Identities = 46/156 (29%), Positives = 65/156 (41%), Gaps = 6/156 (3%)
Frame = +3
Query: 417 HACGHNLIAECSVAAGIGLMQIMKTYNLKGKLSLLGTPGEEDWGGKIKYVSEGFFKDVDA 596
HACGH+ + ++ G+ L L GK+ ++ P EE G G D D
Sbjct: 138 HACGHD--SHITIGLGVALWIAQNKDKLTGKVKIVFQPAEEGVRGAAAIAQSGIIDDADY 195
Query: 597 AVMCHPSI----KNVVHKTHLALSQYKIS--FFGKEAHAAGSPWMGINALDAAVLAYQSV 758
H S V+ LS KI + GK AHA +P +G NAL AA +
Sbjct: 196 FASSHISFCANTGTVIANPRNFLSTTKIDIRYKGKPAHAGAAPHLGRNALLAAAHTVTQL 255
Query: 759 SCLRQQIHPDCRINGIFIHGGVSTNVIPNYTEMEYE 866
+ + RIN + G NVIP+ E++ E
Sbjct: 256 HGIARHGKGMTRINVGVLKAGEGRNVIPSSAELQLE 291
>sp|P58156|CBPX2_SULSO Thermostable carboxypeptidase 2
Length = 393
Score = 59.3 bits (142), Expect = 1e-08
Identities = 64/255 (25%), Positives = 102/255 (40%), Gaps = 27/255 (10%)
Frame = +3
Query: 177 NAIDKDAEELYALSNYLHCNPEISFNEYKAHDYICSYLEKKGFKVERHFKLETGFVAVYE 356
N + + + + + +H NPE+S+ EY + L K G +VE L T V
Sbjct: 9 NDVKEIEDWIIQIRRKIHENPELSYKEYSTSKLVAETLRKLGIEVEEGVGLPTAVVGKIR 68
Query: 357 TALQPHLVIL-VEMDALPI--------------IGHACGHNLIAECSVAAGIGLMQIMKT 491
V L +MDALP+ + HACGH+ ++ G + +
Sbjct: 69 GNKPGKTVALRADMDALPVEETSDVEFKSKVKGVMHACGHD--THVAMLLGGAYLLVKNK 126
Query: 492 YNLKGKLSLLGTPGEED--WGGKIKYVSEGFFKDVDAAVMCH-----PSIKNVVHKTHLA 650
+ G++ L+ P EED GG + G VD H PS K +
Sbjct: 127 DLISGEIRLIFQPAEEDGGLGGAKPMIEAGVMNGVDYVFGIHISSSYPSGVFATRKGPIM 186
Query: 651 LS--QYKISFFGKEAHAAGSPWMGINALDAAV-LAYQSVSCLRQQIHP--DCRINGIFIH 815
+ +KI GK H + +P I+ + ++ +A +QI P I+ IH
Sbjct: 187 ATPDAFKIVVHGKGGHGS-APHETIDPIFISLQIANAIYGITARQIDPVQPFVISITTIH 245
Query: 816 GGVSTNVIPNYTEME 860
G N+IP+ EM+
Sbjct: 246 SGTKDNIIPDDAEMQ 260
>sp|P54970|ILL2_ARATH IAA-amino acid hydrolase homolog 2 precursor
Length = 439
Score = 58.2 bits (139), Expect = 3e-08
Identities = 62/234 (26%), Positives = 97/234 (41%), Gaps = 27/234 (11%)
Frame = +3
Query: 225 LHCNPEISFNEYKAHDYICSYLEKKGFKVERHFKLETGFVAVYETALQPHLVILVEMDAL 404
+H NPE+ + E + I S LE G K R+ TG + T P + + +MDAL
Sbjct: 58 IHENPELGYEELETSKLIRSELELIGIKY-RYPVAITGVIGYIGTGEPPFVALRADMDAL 116
Query: 405 PIIG--------------HACGHNLIAECSVAAGIGLMQIMKTYNLKGKLSLLGTPGEED 542
PI HACGH+ ++ G + ++L+G + L+ P EE
Sbjct: 117 PIQEGVEWEHKSKIAGKMHACGHD--GHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEG 174
Query: 543 WGGKIKYVSEGFFKDVDAAVMCHPSIKNVVHKTH-------LALSQYKISFFGKEAHAAG 701
G K EG K+V+A H S + K ++ GK HAA
Sbjct: 175 LSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAA- 233
Query: 702 SPWMGINALDAAVLAYQSVSCLRQQIHP-----DCRINGIF-IHGGVSTNVIPN 845
+ + +D V A V L+Q + D ++ + ++GG + NVIP+
Sbjct: 234 ---IPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGGNAFNVIPD 284
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,004,749
Number of Sequences: 369166
Number of extensions: 2130915
Number of successful extensions: 5789
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5769
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8982382310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)