Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_025_J16
(661 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P91754|ACT_LUMRU Actin 424 e-118
sp|P92182|ACT1_LUMTE Actin-1 424 e-118
sp|Q26065|ACT_PLAMG Actin, adductor muscle 424 e-118
sp|P92176|ACT2_LUMTE Actin-2 422 e-118
sp|P53458|ACT5_DIPDE Actin-5 422 e-118
sp|P10984|ACT2_CAEEL Actin-2 422 e-118
sp|P41340|ACT3_LIMPO Actin-3 422 e-118
sp|P53464|ACTM_HELTB Actin, cytoskeletal (M) 422 e-118
sp|P30163|ACT2_ONCVO Actin-2 422 e-118
sp|P30162|ACT1_ONCVO Actin-1 422 e-118
>sp|P91754|ACT_LUMRU Actin
Length = 372
Score = 424 bits (1090), Expect = e-118
Identities = 206/208 (99%), Positives = 208/208 (100%)
Frame = +2
Query: 2 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 181
CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV
Sbjct: 14 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 73
Query: 182 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAI 361
TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAI
Sbjct: 74 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI 133
Query: 362 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 541
QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 134 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 193
Query: 542 GYSFTTTAEREIVRDIKEKLCYIALDFD 625
GYSFTTTAEREIVRDIKEKLCY+ALDFD
Sbjct: 194 GYSFTTTAEREIVRDIKEKLCYVALDFD 221
>sp|P92182|ACT1_LUMTE Actin-1
Length = 376
Score = 424 bits (1090), Expect = e-118
Identities = 206/208 (99%), Positives = 208/208 (100%)
Frame = +2
Query: 2 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 181
CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 77
Query: 182 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAI 361
TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAI
Sbjct: 78 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI 137
Query: 362 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 541
QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 542 GYSFTTTAEREIVRDIKEKLCYIALDFD 625
GYSFTTTAEREIVRDIKEKLCY+ALDFD
Sbjct: 198 GYSFTTTAEREIVRDIKEKLCYVALDFD 225
>sp|Q26065|ACT_PLAMG Actin, adductor muscle
Length = 376
Score = 424 bits (1089), Expect = e-118
Identities = 206/208 (99%), Positives = 208/208 (100%)
Frame = +2
Query: 2 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 181
CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 77
Query: 182 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAI 361
TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAI
Sbjct: 78 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAI 137
Query: 362 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 541
QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 542 GYSFTTTAEREIVRDIKEKLCYIALDFD 625
GYSFTTTAEREIVRDIKEKLCY+ALDF+
Sbjct: 198 GYSFTTTAEREIVRDIKEKLCYVALDFE 225
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 422 bits (1086), Expect = e-118
Identities = 205/208 (98%), Positives = 208/208 (100%)
Frame = +2
Query: 2 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 181
CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 77
Query: 182 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAI 361
TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAI
Sbjct: 78 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI 137
Query: 362 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 541
QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 542 GYSFTTTAEREIVRDIKEKLCYIALDFD 625
GYSFTTTAEREIVRDIKEKLCY+ALDF+
Sbjct: 198 GYSFTTTAEREIVRDIKEKLCYVALDFE 225
>sp|P53458|ACT5_DIPDE Actin-5
Length = 371
Score = 422 bits (1086), Expect = e-118
Identities = 205/208 (98%), Positives = 208/208 (100%)
Frame = +2
Query: 2 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 181
CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV
Sbjct: 13 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 72
Query: 182 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAI 361
TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAI
Sbjct: 73 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI 132
Query: 362 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 541
QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 133 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 192
Query: 542 GYSFTTTAEREIVRDIKEKLCYIALDFD 625
GYSFTTTAEREIVRDIKEKLCY+ALDF+
Sbjct: 193 GYSFTTTAEREIVRDIKEKLCYVALDFE 220
>sp|P10984|ACT2_CAEEL Actin-2
Length = 376
Score = 422 bits (1085), Expect = e-118
Identities = 205/208 (98%), Positives = 207/208 (99%)
Frame = +2
Query: 2 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 181
CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 77
Query: 182 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAI 361
TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAI
Sbjct: 78 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137
Query: 362 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 541
QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 542 GYSFTTTAEREIVRDIKEKLCYIALDFD 625
GYSFTTTAEREIVRDIKEKLCY+ALDF+
Sbjct: 198 GYSFTTTAEREIVRDIKEKLCYVALDFE 225
>sp|P41340|ACT3_LIMPO Actin-3
Length = 376
Score = 422 bits (1085), Expect = e-118
Identities = 205/208 (98%), Positives = 207/208 (99%)
Frame = +2
Query: 2 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 181
CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 77
Query: 182 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAI 361
TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAI
Sbjct: 78 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137
Query: 362 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 541
QAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 542 GYSFTTTAEREIVRDIKEKLCYIALDFD 625
GYSFTTTAEREIVRDIKEKLCY+ALDFD
Sbjct: 198 GYSFTTTAEREIVRDIKEKLCYVALDFD 225
>sp|P53464|ACTM_HELTB Actin, cytoskeletal (M)
Length = 376
Score = 422 bits (1085), Expect = e-118
Identities = 206/208 (99%), Positives = 207/208 (99%)
Frame = +2
Query: 2 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 181
CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 77
Query: 182 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAI 361
TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAI
Sbjct: 78 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAI 137
Query: 362 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 541
QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 542 GYSFTTTAEREIVRDIKEKLCYIALDFD 625
GYSFTTTAEREIVRDIKEKLCY ALDF+
Sbjct: 198 GYSFTTTAEREIVRDIKEKLCYTALDFE 225
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 422 bits (1085), Expect = e-118
Identities = 205/208 (98%), Positives = 207/208 (99%)
Frame = +2
Query: 2 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 181
CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 77
Query: 182 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAI 361
TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAI
Sbjct: 78 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137
Query: 362 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 541
QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 542 GYSFTTTAEREIVRDIKEKLCYIALDFD 625
GYSFTTTAEREIVRDIKEKLCY+ALDF+
Sbjct: 198 GYSFTTTAEREIVRDIKEKLCYVALDFE 225
>sp|P30162|ACT1_ONCVO Actin-1
Length = 376
Score = 422 bits (1085), Expect = e-118
Identities = 205/208 (98%), Positives = 207/208 (99%)
Frame = +2
Query: 2 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 181
CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 77
Query: 182 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAI 361
TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAI
Sbjct: 78 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137
Query: 362 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 541
QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 542 GYSFTTTAEREIVRDIKEKLCYIALDFD 625
GYSFTTTAEREIVRDIKEKLCY+ALDF+
Sbjct: 198 GYSFTTTAEREIVRDIKEKLCYVALDFE 225
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,473,505
Number of Sequences: 369166
Number of extensions: 1580284
Number of successful extensions: 5339
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5253
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5511356910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)