Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_025_J07
(442 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q63627|SFR15_RAT Splicing factor, arginine/serine-rich 1... 70 2e-12
sp|P35085|CBPA_DICDI Calcium-binding protein 66 4e-11
sp|P38486|LEG3_CANFA Galectin-3 (Galactose-specific lectin ... 63 2e-10
sp|Q9Y6V0|PCLO_HUMAN Piccolo protein (Aczonin) 62 6e-10
sp|Q25434|FP1_MYTCO Adhesive plaque matrix protein precurso... 62 7e-10
sp|Q9M291|SC24C_ARATH Protein transport protein Sec24-like CEF 59 4e-09
sp|Q8R4X3|RBM12_MOUSE RNA-binding protein 12 (RNA-binding m... 59 6e-09
sp|Q62203|SF3A2_MOUSE Splicing factor 3A subunit 2 (Spliceo... 57 1e-08
sp|P20073|ANXA7_HUMAN Annexin A7 (Annexin VII) (Synexin) 57 2e-08
sp|Q21184|YXWK_CAEEL Putative cuticle collagen F55C10.3 57 2e-08
>sp|Q63627|SFR15_RAT Splicing factor, arginine/serine-rich 15 (CTD-binding SR-like
protein RA4)
Length = 1048
Score = 70.5 bits (171), Expect = 2e-12
Identities = 49/132 (37%), Positives = 54/132 (40%), Gaps = 5/132 (3%)
Frame = +3
Query: 18 PGGVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGM 197
P G P G P P M P QPGM P QPG+ P QPGM P QPGM
Sbjct: 203 PNGQMPGFGLLSAPPPFPPMPQPGMPQPGMPQPGMPQPGLSQPGLPQPGMPQPGMPQPGM 262
Query: 198 VYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPST-----G 362
P QPG+ +QPGM P P GM PQ GM P P T
Sbjct: 263 PQP---------GMPQPGLAQPGLAQPGMPQPGMPQPGM--PQPGMPQPGMPPTPPVQPT 311
Query: 363 YNPGVPPGSYPH 398
+ P P + PH
Sbjct: 312 FQPTFQPQNEPH 323
Score = 61.2 bits (147), Expect = 9e-10
Identities = 41/92 (44%), Positives = 44/92 (47%)
Frame = +3
Query: 3 PGHVQPGGVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPA 182
PG QPG P G PG+P QPGM P QPGM P QPG+ P QPGM P
Sbjct: 230 PGMPQPGMPQP-GLSQPGLP-QPGMPQPGMPQPGMPQPGMPQPGLAQPGLAQPGMPQPGM 287
Query: 183 GQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQP 278
QPGM P QPGM + P QP
Sbjct: 288 PQPGMPQP---------GMPQPGMPPTPPVQP 310
Score = 43.5 bits (101), Expect = 2e-04
Identities = 51/155 (32%), Positives = 59/155 (38%), Gaps = 24/155 (15%)
Frame = +3
Query: 3 PGHVQPGGVYPHGGYAPGVPHQPGMVYPPAGQPG---MVYPPA----GQPGMIYPPAIQP 161
P P G+ P G+ PGVP P PP PG M PP G P I PP P
Sbjct: 612 PAFTPPLGI-PPPGFGPGVPPPPPPP-PPFWGPGFNPMHLPPGFLPPGPPPPITPPVSIP 669
Query: 162 GMVCPPAGQPGMVYPSSGTHGGAY---------SAGQPGMNYSNPSQPGMVYPNAPPGGM 314
PP P +V SG G A SAG P S P+ P + P + G
Sbjct: 670 PPHTPPISIPNLV---SGARGNAESADSAKMYGSAGPPAAPTSLPTPP-VTQPVSLLGTQ 725
Query: 315 TYPQGGMTYPSGPSTGY---NPGV-----PPGSYP 395
G + PSTG PG+ PPG P
Sbjct: 726 GVAPGPVIGLQAPSTGLLGGRPGLIPLQRPPGMPP 760
Score = 35.4 bits (80), Expect = 0.055
Identities = 29/82 (35%), Positives = 32/82 (39%)
Frame = +3
Query: 60 PHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYSA 239
PHQPG A QP PP G P PP PG+ PP P P G
Sbjct: 598 PHQPGPPVVGALQPPAFTPPLGIP----PPGFGPGVPPPPPPPP----PFWG-------- 641
Query: 240 GQPGMNYSNPSQPGMVYPNAPP 305
PG N + PG + P PP
Sbjct: 642 --PGFNPMH-LPPGFLPPGPPP 660
Score = 32.0 bits (71), Expect = 0.61
Identities = 29/118 (24%), Positives = 34/118 (28%), Gaps = 25/118 (21%)
Frame = +3
Query: 117 PAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYSAGQPGMNYS----------- 263
PA + P PP Q YP G AY+ Q +
Sbjct: 136 PAAATPAVAPAVPASSATSPPPPQAPFGYPGDGMQQPAYTQHQNVDQFQPRMMALQQDSM 195
Query: 264 --------NPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGY------NPGVPPGSYP 395
N PG +APP PQ GM P P G PG+P P
Sbjct: 196 QHQVPLPPNGQMPGFGLLSAPPPFPPMPQPGMPQPGMPQPGMPQPGLSQPGLPQPGMP 253
>sp|P35085|CBPA_DICDI Calcium-binding protein
Length = 467
Score = 65.9 bits (159), Expect = 4e-11
Identities = 56/142 (39%), Positives = 58/142 (40%), Gaps = 11/142 (7%)
Frame = +3
Query: 3 PGHVQPGGVYPHGGYAPGVPHQPGMVYPPAGQPGM--VYPP--AGQPGMIYPPAI--QPG 164
PG P G Y P P QPG YPP QPG YPP GQPG YPP PG
Sbjct: 81 PGQYPPQQPGAPGQYPPQQPGQPG--YPPQ-QPGQSGQYPPQQPGQPG--YPPQQPGAPG 135
Query: 165 MVCPPAGQPGMVYPSSGTHGGAYSAGQPGM-NYSNPSQPGMVYPNAP--PGGMTYPQGGM 335
P GQPG P G Y Q G P QPG P P PG QG
Sbjct: 136 QYPPQQGQPGQYPPQQPGQPGQYPPQQQGQYPPQQPGQPGAYPPQQPGQPGAYPPQQGVQ 195
Query: 336 TYPSGPSTGYNPGVPP--GSYP 395
+ PGVPP G+YP
Sbjct: 196 NTLAKTGAPGQPGVPPPQGAYP 217
Score = 65.9 bits (159), Expect = 4e-11
Identities = 56/154 (36%), Positives = 60/154 (38%), Gaps = 27/154 (17%)
Frame = +3
Query: 15 QPG--GVYP-----HGGYAPGVPHQPGMVYPPAGQPGMVYPP--AGQPGMIYPPAIQPGM 167
QPG G YP GY P P PG P GQPG YPP GQPG YPP Q
Sbjct: 109 QPGQSGQYPPQQPGQPGYPPQQPGAPGQYPPQQGQPGQ-YPPQQPGQPGQ-YPPQQQGQY 166
Query: 168 VCPPAGQPGMVYPSSGTHGGAY--------------SAGQPGMNYSNPSQPGMVYPNAPP 305
GQPG P GAY + GQPG+ + PG P PP
Sbjct: 167 PPQQPGQPGAYPPQQPGQPGAYPPQQGVQNTLAKTGAPGQPGVPPPQGAYPGQ--PGVPP 224
Query: 306 GGMTY----PQGGMTYPSGPSTGYNPGVPPGSYP 395
Y P G P G Y P PG+YP
Sbjct: 225 QQGAYPGQQPPMGAYPPQGQPGAYPPQGQPGAYP 258
Score = 60.5 bits (145), Expect = 2e-09
Identities = 51/136 (37%), Positives = 56/136 (41%), Gaps = 5/136 (3%)
Frame = +3
Query: 3 PGHVQPGGVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPA 182
PG P G YPP GQPG YPP GQPG YPP Q V P
Sbjct: 230 PGQQPPMG-----------------AYPPQGQPG-AYPPQGQPG-AYPP--QQQQVAYPG 268
Query: 183 GQP--GMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYP---QGGMTYPS 347
QP G P G + G A PG + P Q G YP PP G YP Q G++ S
Sbjct: 269 QQPPMGAYPPQQGAYPGQQGA-YPGQQGAYPGQQG-AYPGQPPMG-AYPGQQQYGVSAYS 325
Query: 348 GPSTGYNPGVPPGSYP 395
+ Y G PG P
Sbjct: 326 QTTAAYQTGAYPGQTP 341
Score = 58.5 bits (140), Expect = 6e-09
Identities = 60/157 (38%), Positives = 65/157 (41%), Gaps = 30/157 (19%)
Frame = +3
Query: 15 QPG--GVYPH-----GGYAPGVPHQPGMV-------YPPA--GQPGMVYPPA--GQPGMI 140
QPG G YP G Y P P QPG YPP GQPG YPP GQPG
Sbjct: 130 QPGAPGQYPPQQGQPGQYPPQQPGQPGQYPPQQQGQYPPQQPGQPG-AYPPQQPGQPGA- 187
Query: 141 YPP--AIQPGMVCPPA-GQPGMVYPSSGTHG--------GAYSAGQPGMN-YSNPSQPGM 284
YPP +Q + A GQPG+ P G GAY QP M Y QPG
Sbjct: 188 YPPQQGVQNTLAKTGAPGQPGVPPPQGAYPGQPGVPPQQGAYPGQQPPMGAYPPQGQPGA 247
Query: 285 VYPNAPPGGMTYPQGGMTYPSGPSTGYNPGVPPGSYP 395
P PG Q + YP G P P G+YP
Sbjct: 248 YPPQGQPGAYPPQQQQVAYP-----GQQP--PMGAYP 277
Score = 53.9 bits (128), Expect = 2e-07
Identities = 50/137 (36%), Positives = 50/137 (36%), Gaps = 16/137 (11%)
Frame = +3
Query: 33 PHGGYAPGVPHQPGMVYPPA--GQPGMVYPPAGQPGMIYPPAIQPGMVCPPAG----QPG 194
P PG P PG YPP G PG PP YP QPG P QPG
Sbjct: 31 PGSQSTPGAPGAPGQ-YPPQQPGAPGSNLPP-------YPGTQQPGAPGAPGQYPPQQPG 82
Query: 195 MVYPSSGTHGGAYSAGQPGMNYSNPSQPGM--VYPNAPPGGMTYP--QGGMTYPSGPSTG 362
P G Y QPG P QPG YP PG YP Q G P G
Sbjct: 83 QYPPQQPGAPGQYPPQQPGQPGYPPQQPGQSGQYPPQQPGQPGYPPQQPGAPGQYPPQQG 142
Query: 363 ----YNPGVP--PGSYP 395
Y P P PG YP
Sbjct: 143 QPGQYPPQQPGQPGQYP 159
Score = 52.8 bits (125), Expect = 3e-07
Identities = 56/147 (38%), Positives = 57/147 (38%), Gaps = 21/147 (14%)
Frame = +3
Query: 18 PGGVYPHGGYAPGVPHQPGMVYPP---------AGQPGMVYPPAGQPGMIYPPAIQPGM- 167
PG G Y P P PG PP G PG YPP QPG YPP QPG
Sbjct: 37 PGAPGAPGQYPPQQPGAPGSNLPPYPGTQQPGAPGAPGQ-YPPQ-QPGQ-YPPQ-QPGAP 92
Query: 168 -VCPP--AGQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGM--VYP--NAPPGGMTYPQ 326
PP GQPG P G Y QPG P QPG YP PG Q
Sbjct: 93 GQYPPQQPGQPGYP-PQQPGQSGQYPPQQPGQPGYPPQQPGAPGQYPPQQGQPGQYPPQQ 151
Query: 327 GGM--TYPSGPSTGYNPGVP--PGSYP 395
G YP Y P P PG+YP
Sbjct: 152 PGQPGQYPPQQQGQYPPQQPGQPGAYP 178
Score = 39.3 bits (90), Expect = 0.004
Identities = 47/142 (33%), Positives = 48/142 (33%), Gaps = 21/142 (14%)
Frame = +3
Query: 33 PHGGYAPGVPHQPGMVYPPAGQPGMVYPPA--GQPGMIYPPAIQPGMVCPPAGQPGMVYP 206
P G A P V G PG P G PG YPP QPG PG P
Sbjct: 9 PAGSAADFYSQMPVKVMGTPGAPGSQSTPGAPGAPGQ-YPPQ-QPGA-------PGSNLP 59
Query: 207 SSGTHGGAYSAGQPGM-NYSNPSQPGMV----------YPNAPPGGMTYP-----QGGMT 338
+ G G PG P QPG YP PG YP Q G
Sbjct: 60 P---YPGTQQPGAPGAPGQYPPQQPGQYPPQQPGAPGQYPPQQPGQPGYPPQQPGQSGQY 116
Query: 339 YPSGP-STGYNPGVP--PGSYP 395
P P GY P P PG YP
Sbjct: 117 PPQQPGQPGYPPQQPGAPGQYP 138
>sp|P38486|LEG3_CANFA Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)
(IgE-binding protein) (35 kDa lectin) (Carbohydrate
binding protein 35) (CBP 35) (Laminin-binding protein)
(Lectin L-29)
Length = 296
Score = 63.2 bits (152), Expect = 2e-10
Identities = 49/129 (37%), Positives = 53/129 (41%), Gaps = 1/129 (0%)
Frame = +3
Query: 3 PGHVQPGGVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPA 182
PG PGG YP G P Q PP G PG PP G PG PP PG PP
Sbjct: 46 PGQAPPGG-YPGQAPPGGYPGQA----PPGGYPGQA-PPGGYPGQA-PPGGYPGQA-PPG 97
Query: 183 GQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTG 362
G PG P GT+ G + PG P+ PG P P G YP G G
Sbjct: 98 GYPGQAPP--GTYPGPTAPAYPG-----PTAPG-TQPGQPSGPGAYPPPGQPSAPGAYPA 149
Query: 363 YNP-GVPPG 386
P G+P G
Sbjct: 150 AGPFGIPAG 158
Score = 57.8 bits (138), Expect = 1e-08
Identities = 49/131 (37%), Positives = 51/131 (38%), Gaps = 10/131 (7%)
Frame = +3
Query: 33 PHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSS 212
P G G PG YP A PG PP G PG PP PG PP G PG P
Sbjct: 25 PWGNQPAGAGGYPGASYPGA-YPGQA-PPGGYPGQA-PPGGYPGQA-PPGGYPGQA-PPG 79
Query: 213 GTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGM-------TYP-QGGMTYPSGPSTGYN 368
G G A G PG APPGG TYP YP + G
Sbjct: 80 GYPGQAPPGGYPG--------------QAPPGGYPGQAPPGTYPGPTAPAYPGPTAPGTQ 125
Query: 369 PGVP--PGSYP 395
PG P PG+YP
Sbjct: 126 PGQPSGPGAYP 136
Score = 54.7 bits (130), Expect = 9e-08
Identities = 51/136 (37%), Positives = 55/136 (40%), Gaps = 5/136 (3%)
Frame = +3
Query: 3 PGHVQPGGV---YPHGGYAPGVPH--QPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGM 167
PG PGG P GGY P PG PP G PG PP G PG PP PG
Sbjct: 55 PGQAPPGGYPGQAPPGGYPGQAPPGGYPGQA-PPGGYPGQA-PPGGYPGQA-PPGTYPGP 111
Query: 168 VCPPAGQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPS 347
P PG P GT G S PS PG YP A P G+ P G +T P
Sbjct: 112 TAP--AYPGPTAP--GTQPGQPSGPGAYPPPGQPSAPG-AYPAAGPFGI--PAGPLTVP- 163
Query: 348 GPSTGYNPGVPPGSYP 395
Y+ +P G P
Sbjct: 164 -----YDLPLPGGVKP 174
>sp|Q9Y6V0|PCLO_HUMAN Piccolo protein (Aczonin)
Length = 5183
Score = 62.0 bits (149), Expect = 6e-10
Identities = 51/140 (36%), Positives = 57/140 (40%), Gaps = 9/140 (6%)
Frame = +3
Query: 3 PGHV--QPGGVYPHGGYAPGVPHQP-GMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVC 173
PGH QPG P P QP G+ P A QPG V PP PG PPA G
Sbjct: 319 PGHEKSQPGPAKP--------PAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAK 370
Query: 174 PPAGQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYP---QGGMTYP 344
PPA Q G PSS G A PG+ + QPG P G P Q G+ P
Sbjct: 371 PPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSP 430
Query: 345 S---GPSTGYNPGVPPGSYP 395
+ GP+ PP P
Sbjct: 431 AKAPGPTKTPAQTKPPSQQP 450
Score = 57.8 bits (138), Expect = 1e-08
Identities = 38/98 (38%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = +3
Query: 15 QPGGVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPG 194
QPG P APG P PP+ QPG PP QPG P QPG PP+ QPG
Sbjct: 424 QPGLQSP--AKAPGPTKTPAQTKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPG 481
Query: 195 MVYPSSGTHGGAYSAGQPGMNYSNP-SQPGMVYPNAPP 305
PS+ A + Q ++ P SQ G P PP
Sbjct: 482 SAKPSAQQPSPAKPSAQ---QFTKPVSQTGFGKPLQPP 516
Score = 51.2 bits (121), Expect = 1e-06
Identities = 40/119 (33%), Positives = 45/119 (37%), Gaps = 5/119 (4%)
Frame = +3
Query: 15 QPGGVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYP-----PAIQPGMVCPP 179
QP GV G P QPG PP Q G P A QPG+ P P P PP
Sbjct: 393 QPPGV----GKTPA--QQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPAQTKPP 446
Query: 180 AGQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPS 356
+ QPG P QPG +P QPG P + G P P+ PS
Sbjct: 447 SQQPGSTKP---------PPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPS 496
Score = 45.1 bits (105), Expect = 7e-05
Identities = 37/114 (32%), Positives = 40/114 (35%), Gaps = 5/114 (4%)
Frame = +3
Query: 60 PHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYSA 239
P P PP QP PPA QPG QPG PPA G+ P + G
Sbjct: 296 PSLPSPSKPPIQQPTPGKPPAQQPG---HEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPP 352
Query: 240 GQPGMNYSNPSQP-GMVYPNAPPGGMTYPQGGMTYPSG----PSTGYNPGVPPG 386
QP P+QP G P A G P P P G P PG
Sbjct: 353 VQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPG 406
Score = 38.5 bits (88), Expect = 0.007
Identities = 29/96 (30%), Positives = 34/96 (35%), Gaps = 24/96 (25%)
Frame = +3
Query: 3 PGHVQPGGVYP---HGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGM------------ 137
P QPG P G A P QPG PP+ QPG P A QP
Sbjct: 445 PPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQFTKPV 504
Query: 138 --------IYPPAIQPGMVCPPA-GQPGMVYPSSGT 218
+ PP + P PP+ G P + P T
Sbjct: 505 SQTGFGKPLQPPTVSPSAKQPPSQGLPKTICPLCNT 540
>sp|Q25434|FP1_MYTCO Adhesive plaque matrix protein precursor (Foot protein 1) (MCFP1)
Length = 872
Score = 61.6 bits (148), Expect = 7e-10
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Frame = +3
Query: 81 YPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYSAG-QPGMN 257
YPP +P + YPP +P YPP+ +P + PP +P YP + G+Y QP
Sbjct: 628 YPPTYKPKITYPPTYKPKPSYPPSYRPKITYPPTYKPKKSYPQAYKSKGSYPPSYQPKKT 687
Query: 258 YSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPS-----TGYNPGVPPG-SYP 395
Y +P YP ++YP T PS P+ T Y P P SYP
Sbjct: 688 YPPSYKPKKTYPPTYKPKISYPPTYKTKPSYPASYKRKTSYPPTYKPKISYP 739
Score = 58.9 bits (141), Expect = 5e-09
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Frame = +3
Query: 45 YAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHG 224
Y P H+ + YPP +P + YPP + YPP+ +P PP +P + YP +
Sbjct: 130 YPPSYKHK--ITYPPTYKPKITYPPTYKQKPSYPPSYKPKTTYPPTYKPKITYPPTYKRK 187
Query: 225 GAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGVPPG-SYP 395
+Y+ +P Y +P + YP TY + P P T Y P P SYP
Sbjct: 188 PSYTPYKPKATYPPTYKPKITYP------PTYKRKPSYTPYKPKTTYPPTYKPKISYP 239
Score = 57.4 bits (137), Expect = 1e-08
Identities = 40/125 (32%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Frame = +3
Query: 18 PGGVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGM 197
P P Y+P ++P + YPP +P YPP+ +P YPP +P + PP +P
Sbjct: 369 PPSYKPKKTYSP--TYKPKITYPPTYKPKPSYPPSYKPKTTYPPTYKPKISYPPTYKPKA 426
Query: 198 VYPSSGTHGGAY-SAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPG 374
Y SS Y +P ++Y +P YP +TYP PS P T Y P
Sbjct: 427 SYVSSYKSKKTYPPTYKPKISYPPTYKPKPSYPPTYKPKITYPPTYKPKPSYPPT-YKPK 485
Query: 375 V--PP 383
+ PP
Sbjct: 486 ITYPP 490
Score = 53.9 bits (128), Expect = 2e-07
Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Frame = +3
Query: 63 HQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYSAG 242
++P YPP+ +P YPP +P + YPP +P PP +P + YP + +Y
Sbjct: 542 YKPKPSYPPSYKPKTTYPPTYKPKIRYPPTYKPKASYPPTYKPKITYPPTYKPKPSY--- 598
Query: 243 QPGMNYSNPSQPGMV-----YPNAPPGGMTYP---QGGMTYPSGPSTGYNPGVPPGSYP 395
P PS P + YP A TYP + +TYP P+ P PP P
Sbjct: 599 -PTPYKQKPSYPPIYKSKSSYPTAYKSKKTYPPTYKPKITYP--PTYKPKPSYPPSYRP 654
Score = 53.5 bits (127), Expect = 2e-07
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Frame = +3
Query: 63 HQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYSAG 242
++P + YPP +P YPP +P + YPP +P PP +P + YP + +Y
Sbjct: 442 YKPKISYPPTYKPKPSYPPTYKPKITYPPTYKPKPSYPPTYKPKITYPPTYKRKPSY--- 498
Query: 243 QPGMNYSNPSQPGMV-----YPNAPPGGMTYP---QGGMTYPSGPSTGYNPGVPPGSYP 395
P PS P + YP + TYP + +TYP P+ P PP P
Sbjct: 499 -PTPYKQKPSYPPIYKSKSSYPTSYKSKKTYPPTYKPKITYP--PTYKPKPSYPPSYKP 554
Score = 52.8 bits (125), Expect = 3e-07
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Frame = +3
Query: 63 HQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYSAG 242
++P + YPP +P YPP +P + YPP +P PP +P + YP + +Y
Sbjct: 262 YKPKISYPPTYKPKPSYPPTYKPKVTYPPTYKPKPSYPPTYKPKITYPPTYKPKPSY--- 318
Query: 243 QPGMNYSNPSQPGMV-----YPNAPPGGMTYP---QGGMTYPSGPSTGYNPGVPPGSYP 395
P PS P + YP + TYP + +TYP P+ P PP P
Sbjct: 319 -PTPYKQKPSYPPIYKSKSSYPTSYKSKKTYPPTYKPKITYP--PTYKPKPSYPPSYKP 374
Score = 50.4 bits (119), Expect = 2e-06
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Frame = +3
Query: 63 HQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAY-SA 239
++P + YPP +P YPP+ +P Y P +P + PP +P YP S Y
Sbjct: 352 YKPKITYPPTYKPKPSYPPSYKPKKTYSPTYKPKITYPPTYKPKPSYPPSYKPKTTYPPT 411
Query: 240 GQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGV-PPGSYP 395
+P ++Y +P Y ++ TYP TY P Y P P SYP
Sbjct: 412 YKPKISYPPTYKPKASYVSSYKSKKTYPP---TYK--PKISYPPTYKPKPSYP 459
Score = 50.1 bits (118), Expect = 2e-06
Identities = 37/132 (28%), Positives = 54/132 (40%), Gaps = 15/132 (11%)
Frame = +3
Query: 45 YAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQ---------PGMVCPPAGQPGM 197
Y P +P YPP+ +P YPP +P + YPP + P PP +P +
Sbjct: 150 YPPTYKQKPS--YPPSYKPKTTYPPTYKPKITYPPTYKRKPSYTPYKPKATYPPTYKPKI 207
Query: 198 VYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYP---QGGMTYPS--GPSTG 362
YP + +Y+ +P Y +P + YP+ +Y + TYP P
Sbjct: 208 TYPPTYKRKPSYTPYKPKTTYPPTYKPKISYPSIYKPKASYVSSYKSKKTYPPTYKPKIS 267
Query: 363 YNPGV-PPGSYP 395
Y P P SYP
Sbjct: 268 YPPTYKPKPSYP 279
Score = 50.1 bits (118), Expect = 2e-06
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = +3
Query: 33 PHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPS 209
P YA ++P + YPP +P + YPP +P + YPP +P + PPA +P + YPS
Sbjct: 814 PKPSYASS--YKPKITYPPTYKPKISYPPTYKPKITYPPTYKPKISYPPAYKPKISYPS 870
Score = 48.1 bits (113), Expect = 8e-06
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Frame = +3
Query: 81 YPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAY-SAGQPGMN 257
YPP +P + YPP +P YPP +P + PP +P YP + Y +P +
Sbjct: 258 YPPTYKPKISYPPTYKPKPSYPPTYKPKVTYPPTYKPKPSYPPTYKPKITYPPTYKPKPS 317
Query: 258 YSNPSQPGMVYPNAPPGGMTYP---QGGMTYPS--GPSTGYNPGV-PPGSYP 395
Y P + YP +YP + TYP P Y P P SYP
Sbjct: 318 YPTPYKQKPSYPPIYKSKSSYPTSYKSKKTYPPTYKPKITYPPTYKPKPSYP 369
Score = 45.8 bits (107), Expect = 4e-05
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 6/111 (5%)
Frame = +3
Query: 81 YPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYSAGQPGMNY 260
YP + + YPP +P + YPP +P PP+ +P YP + +P + Y
Sbjct: 518 YPTSYKSKKTYPPTYKPKITYPPTYKPKPSYPPSYKPKTTYPPT---------YKPKIRY 568
Query: 261 SNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPST-GYNPGVPP-----GSYP 395
+P YP +TYP PS P+ P PP SYP
Sbjct: 569 PPTYKPKASYPPTYKPKITYPPTYKPKPSYPTPYKQKPSYPPIYKSKSSYP 619
Score = 45.4 bits (106), Expect = 5e-05
Identities = 36/118 (30%), Positives = 47/118 (39%), Gaps = 6/118 (5%)
Frame = +3
Query: 60 PHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYSA 239
P++ YPP + YP A + YPP +P + PP +P YP S
Sbjct: 601 PYKQKPSYPPIYKSKSSYPTAYKSKKTYPPTYKPKITYPPTYKPKPSYPPS--------- 651
Query: 240 GQPGMNYSNPSQPGMVYPNAPPGGMTYP---QGGMTYPSG--PSTGYNPGVPPG-SYP 395
+P + Y +P YP A +YP Q TYP P Y P P SYP
Sbjct: 652 YRPKITYPPTYKPKKSYPQAYKSKGSYPPSYQPKKTYPPSYKPKKTYPPTYKPKISYP 709
Score = 44.3 bits (103), Expect = 1e-04
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Frame = +3
Query: 33 PHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSS 212
P YA ++P + YPP +P Y + +P + YPP +P + +P + YP +
Sbjct: 754 PKPSYASS--YKPKIRYPPTYKPKPSYASSYKPKIRYPPTYKPKPSYASSYKPKIRYPPT 811
Query: 213 GTHGGAY-SAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGVPPG- 386
+Y S+ +P + Y +P + YP +TYP TY P Y P P
Sbjct: 812 YKPKPSYASSYKPKITYPPTYKPKISYPPTYKPKITYPP---TYK--PKISYPPAYKPKI 866
Query: 387 SYP 395
SYP
Sbjct: 867 SYP 869
Score = 43.1 bits (100), Expect = 3e-04
Identities = 32/109 (29%), Positives = 44/109 (40%), Gaps = 1/109 (0%)
Frame = +3
Query: 60 PHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYS- 236
P++ YPP + YP + + YPP +P + PP +P YP S YS
Sbjct: 321 PYKQKPSYPPIYKSKSSYPTSYKSKKTYPPTYKPKITYPPTYKPKPSYPPSYKPKKTYSP 380
Query: 237 AGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGVPP 383
+P + Y +P YP + TYP TY P Y P P
Sbjct: 381 TYKPKITYPPTYKPKPSYPPSYKPKTTYPP---TYK--PKISYPPTYKP 424
Score = 42.7 bits (99), Expect = 3e-04
Identities = 32/131 (24%), Positives = 48/131 (36%), Gaps = 20/131 (15%)
Frame = +3
Query: 60 PHQPGMVYPPAGQPGM--------------------VYPPAGQPGMIYPPAIQPGMVCPP 179
P++P YPP +P + YPP +P + YPP +P PP
Sbjct: 221 PYKPKTTYPPTYKPKISYPSIYKPKASYVSSYKSKKTYPPTYKPKISYPPTYKPKPSYPP 280
Query: 180 AGQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPST 359
+P + YP + +P +Y +P + YP +YP PS P
Sbjct: 281 TYKPKVTYPPT---------YKPKPSYPPTYKPKITYPPTYKPKPSYPTPYKQKPSYPPI 331
Query: 360 GYNPGVPPGSY 392
+ P SY
Sbjct: 332 YKSKSSYPTSY 342
Score = 42.4 bits (98), Expect = 5e-04
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +3
Query: 18 PGGVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGM 197
P P Y P ++P YPP +P + YPP + YP + + PP +P +
Sbjct: 679 PPSYQPKKTYPPS--YKPKKTYPPTYKPKISYPPTYKTKPSYPASYKRKTSYPPTYKPKI 736
Query: 198 VYPSSGTHGGAY-SAGQPGMNYSNPSQPGMVYP 293
YPS+ +Y +P +Y++ +P + YP
Sbjct: 737 SYPSTYKAKPSYPPTYKPKPSYASSYKPKIRYP 769
Score = 42.0 bits (97), Expect = 6e-04
Identities = 24/88 (27%), Positives = 42/88 (47%)
Frame = +3
Query: 33 PHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSS 212
P YA ++P + YPP +P Y + +P + YPP +P + PP +P + YP +
Sbjct: 794 PKPSYASS--YKPKIRYPPTYKPKPSYASSYKPKITYPPTYKPKISYPPTYKPKITYPPT 851
Query: 213 GTHGGAYSAGQPGMNYSNPSQPGMVYPN 296
+P ++Y +P + YP+
Sbjct: 852 ---------YKPKISYPPAYKPKISYPS 870
Score = 41.6 bits (96), Expect = 8e-04
Identities = 42/161 (26%), Positives = 56/161 (34%), Gaps = 30/161 (18%)
Frame = +3
Query: 3 PGHVQPGGVYPHGGYAPGVPHQPGMVYPPAGQP--------------------GMVYPPA 122
P +P G YP Y P + YPP +P YPP+
Sbjct: 76 PAPYKPKGYYPTKRYQPTYGSKTN--YPPIYKPIAKKLSSYKAIKTTYPAYKAKTSYPPS 133
Query: 123 GQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAY-SAGQPGMNYS---------NPS 272
+ + YPP +P + PP + YP S Y +P + Y P
Sbjct: 134 YKHKITYPPTYKPKITYPPTYKQKPSYPPSYKPKTTYPPTYKPKITYPPTYKRKPSYTPY 193
Query: 273 QPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGVPPGSYP 395
+P YP +TYP TY PS Y P P +YP
Sbjct: 194 KPKATYPPTYKPKITYPP---TYKRKPS--YTPYKPKTTYP 229
>sp|Q9M291|SC24C_ARATH Protein transport protein Sec24-like CEF
Length = 1097
Score = 59.3 bits (142), Expect = 4e-09
Identities = 49/134 (36%), Positives = 62/134 (46%), Gaps = 25/134 (18%)
Frame = +3
Query: 66 QPGMVYPPAGQPGMVYPPAGQP------GMIYPPAIQPGM-VCPPAGQPGMVY----PSS 212
QPG +P +G PG V P+G P G PP + PGM + PP+G PG P S
Sbjct: 144 QPGG-FPASGPPGGV--PSGPPSGARPIGFGSPPPMGPGMSMPPPSGMPGGPLSNGPPPS 200
Query: 213 GTHGGAYS-----AGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYP---------SG 350
G HGG S +G PG SN P M+ P A P G + G M P +G
Sbjct: 201 GMHGGHLSNGPPPSGMPGGTLSNGPPPPMMGPGAFPRGSQFTSGPMMAPPPPYGQPPNAG 260
Query: 351 PSTGYNPGVPPGSY 392
P TG +P P ++
Sbjct: 261 PFTGNSPLSSPPAH 274
Score = 58.5 bits (140), Expect = 6e-09
Identities = 56/169 (33%), Positives = 66/169 (39%), Gaps = 41/169 (24%)
Frame = +3
Query: 15 QPGGVYPHGGYAPGVPHQPGMVYPPAGQP-GMVYPPAGQPGMIYPPAIQPGMVCPPAGQP 191
QPGG +P G GVP P P +P G PP PGM PP P+G P
Sbjct: 144 QPGG-FPASGPPGGVPSGP----PSGARPIGFGSPPPMGPGMSMPP---------PSGMP 189
Query: 192 GMVY----PSSGTHGGAYS-----AGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYP 344
G P SG HGG S +G PG SN P M+ P A P G + G M P
Sbjct: 190 GGPLSNGPPPSGMHGGHLSNGPPPSGMPGGTLSNGPPPPMMGPGAFPRGSQFTSGPMMAP 249
Query: 345 ---------SGPSTGYNP----------------GVP------PGSYPH 398
+GP TG +P GVP PG +P+
Sbjct: 250 PPPYGQPPNAGPFTGNSPLSSPPAHSIPAPTNFPGVPYGRPPMPGGFPY 298
Score = 42.7 bits (99), Expect = 3e-04
Identities = 40/118 (33%), Positives = 47/118 (39%), Gaps = 3/118 (2%)
Frame = +3
Query: 51 PGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGA 230
PG P M P G P V P G +PP +P V PP+ QP GG
Sbjct: 87 PGPPPPAAMARP--GGPPQVSQPGG-----FPPVGRP--VAPPSNQPPF--------GGR 129
Query: 231 YSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNP---GVPPGSYP 395
S G S+ QPG + PPGG+ PSGP +G P G PP P
Sbjct: 130 PSTGPLVGGGSSFPQPGGFPASGPPGGV---------PSGPPSGARPIGFGSPPPMGP 178
Score = 35.8 bits (81), Expect = 0.042
Identities = 32/111 (28%), Positives = 38/111 (34%)
Frame = +3
Query: 24 GVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVY 203
G +P G P PP GQP P G + PPA + P PG+ Y
Sbjct: 233 GAFPRGSQFTSGPMMAPP--PPYGQPPNAGPFTGNSPLSSPPAHS---IPAPTNFPGVPY 287
Query: 204 PSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPS 356
GG P S P PG +Y P + MT S PS
Sbjct: 288 GRPPMPGGFPYGAPPQQLPSAPGTPGSIYGMGPMQNQS-----MTSVSSPS 333
>sp|Q8R4X3|RBM12_MOUSE RNA-binding protein 12 (RNA-binding motif protein 12) (SH3/WW
domain anchor protein in the nucleus) (SWAN)
Length = 1002
Score = 58.5 bits (140), Expect = 6e-09
Identities = 41/116 (35%), Positives = 46/116 (39%), Gaps = 1/116 (0%)
Frame = +3
Query: 51 PGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGA 230
PG P P V P AG P P AG PG P A PG P +G PG P G G
Sbjct: 644 PGNPAVP--VIPSAGMPAAGIPTAGIPGAGLPSAGMPGAGMPSSGMPGPGMPGPGIPG-- 699
Query: 231 YSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGY-NPGVPPGSYP 395
AG PG P+ PG P G P M P+ P P +P + P
Sbjct: 700 --AGIPGPAMPGPAMPGPAMPGPAMPGPAMPGPAMPGPAMPGPAMPGPAIPGPAIP 753
Score = 49.3 bits (116), Expect = 4e-06
Identities = 39/126 (30%), Positives = 46/126 (36%), Gaps = 3/126 (2%)
Frame = +3
Query: 27 VYPHGGY-APGVPHQ--PGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGM 197
V P G A G+P PG P AG PG P +G PG P PG P PG
Sbjct: 651 VIPSAGMPAAGIPTAGIPGAGLPSAGMPGAGMPSSGMPGPGMPGPGIPGAGIPGPAMPGP 710
Query: 198 VYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGV 377
P G A PG P+ PG P G P + P+ P P +
Sbjct: 711 AMPGPAMPGPA----MPGPAMPGPAMPGPAMPGPAMPGPAIPGPAIPGPAIP----GPAI 762
Query: 378 PPGSYP 395
P + P
Sbjct: 763 PGPTIP 768
Score = 48.5 bits (114), Expect = 6e-06
Identities = 44/134 (32%), Positives = 50/134 (37%), Gaps = 8/134 (5%)
Frame = +3
Query: 3 PGHVQPGGVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPA 182
PG PG P G PG P PG P PG P PG P PG P
Sbjct: 708 PGPAMPGPAMP-GPAMPG-PAMPGPAMPGPAMPGPAMPGPAIPGPAIPGPAIPGPAIPGP 765
Query: 183 GQPGMVYPSSG-------THGGAYSAGQPGMNY-SNPSQPGMVYPNAPPGGMTYPQGGMT 338
PG PS+G T G + P N+ N P P PP G+ G +
Sbjct: 766 TIPGAGIPSAGGEEHVFLTVGSKEANNGPPFNFPGNFGGPNAFGPPLPPPGLGGAFGDVR 825
Query: 339 YPSGPSTGYNPGVP 380
P PS G N G+P
Sbjct: 826 -PVMPSVG-NSGLP 837
Score = 47.0 bits (110), Expect = 2e-05
Identities = 36/114 (31%), Positives = 37/114 (32%), Gaps = 4/114 (3%)
Frame = +3
Query: 3 PGHVQPGGVYPHGGY----APGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMV 170
PG P P G PG P PG P AG PG P PG P PG
Sbjct: 668 PGAGLPSAGMPGAGMPSSGMPG-PGMPGPGIPGAGIPGPAMPGPAMPGPAMPGPAMPGPA 726
Query: 171 CPPAGQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGG 332
P PG P G A PG P+ PG P G P G
Sbjct: 727 MPGPAMPGPAMPGPAMPGPAI----PGPAIPGPAIPGPAIPGPTIPGAGIPSAG 776
>sp|Q62203|SF3A2_MOUSE Splicing factor 3A subunit 2 (Spliceosome associated protein 62)
(SAP 62) (SF3a66)
Length = 475
Score = 57.4 bits (137), Expect = 1e-08
Identities = 52/139 (37%), Positives = 67/139 (48%), Gaps = 10/139 (7%)
Frame = +3
Query: 9 HVQPGGVYPHGGYAPGV-PHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAG 185
H GV+P APGV P PG V+PPA PG V+PPA PG ++PPA PG+ P G
Sbjct: 306 HPPTSGVHPP---APGVHPPTPG-VHPPA--PG-VHPPA--PG-VHPPA--PGVHPPTPG 353
Query: 186 ----QPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGP 353
PG+ P+ G H A P +P PG+ PP +PQ +P P
Sbjct: 354 VHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGV----HPPAPAVHPQAPGVHPPAP 409
Query: 354 -----STGYNPGVPPGSYP 395
+ G +P PPG +P
Sbjct: 410 GIHPQAPGVHPQPPPGVHP 428
Score = 37.7 bits (86), Expect = 0.011
Identities = 37/121 (30%), Positives = 50/121 (41%), Gaps = 18/121 (14%)
Frame = +3
Query: 87 PAGQPGMVYPPAGQPGMIYP-PAIQPGMVCPPAGQPGMVYPSSGTHGGAYSAGQPGMNYS 263
PAG PG+ PP + P P + + PP G G+ P G A S G PG
Sbjct: 214 PAGPPGVKRPPPPLMNGLPPRPPLPDALPPPPPG--GLPLPPMPPTGPAPS-GPPGPPQM 270
Query: 264 NPSQPGMVYPNA-----------PPGGMTYPQGGMTYPSGPSTGYNPGVP------PGSY 392
P PG V+P A PP +P + +P P++G +P P PG +
Sbjct: 271 PPPAPG-VHPPAPVVHPPTSGVHPPAPGVHPPAPVVHP--PTSGVHPPAPGVHPPTPGVH 327
Query: 393 P 395
P
Sbjct: 328 P 328
Score = 37.7 bits (86), Expect = 0.011
Identities = 39/130 (30%), Positives = 54/130 (41%), Gaps = 9/130 (6%)
Frame = +3
Query: 33 PHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSS 212
P GG +P P P+G PG P PG ++PPA +V PP G+ P+
Sbjct: 245 PPGGLP--LPPMPPTGPAPSGPPGPPQMPPPAPG-VHPPA---PVVHPPTS--GVHPPAP 296
Query: 213 GTHGGAYSAGQPGMNYSNPSQPGMVYPNA---PPGGMTYPQGGMTYPSGPSTGYNPGVP- 380
G H A P + +P PG+ P PP +P +P P+ G +P P
Sbjct: 297 GVHPPA-PVVHPPTSGVHPPAPGVHPPTPGVHPPAPGVHPPAPGVHP--PAPGVHPPTPG 353
Query: 381 -----PGSYP 395
PG +P
Sbjct: 354 VHPPAPGVHP 363
>sp|P20073|ANXA7_HUMAN Annexin A7 (Annexin VII) (Synexin)
Length = 488
Score = 57.0 bits (136), Expect = 2e-08
Identities = 54/135 (40%), Positives = 59/135 (43%), Gaps = 13/135 (9%)
Frame = +3
Query: 30 YPHGGYAP-GVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQP--GMVCPPAGQPGMV 200
YP GY P G P PG YPPAGQ +PP+GQ YP P G P P
Sbjct: 3 YP--GYPPTGYPPFPG--YPPAGQESS-FPPSGQ--YPYPSGFPPMGGGAYPQV--PSSG 53
Query: 201 YPSSGTHGGAYSAGQPGMNYSNPSQPGMV--YPNAPPG-GMTYPQGG---MTYPSGPSTG 362
YP +G + PG Y QPG YP PPG G P GG YP PS
Sbjct: 54 YPGAGGYPAPGGYPAPG-GYPGAPQPGGAPSYPGVPPGQGFGVPPGGAGFSGYPQPPSQS 112
Query: 363 YNPG---VP-PGSYP 395
Y G VP PG +P
Sbjct: 113 YGGGPAQVPLPGGFP 127
Score = 39.7 bits (91), Expect = 0.003
Identities = 39/106 (36%), Positives = 46/106 (43%), Gaps = 11/106 (10%)
Frame = +3
Query: 3 PGHVQPGGVYPHGGYAPGVPHQPGMVYPP--AGQPGMVYPPA----GQPGMIYPPAIQPG 164
PG QPGG + PGVP G PP AG G PP+ G P + P PG
Sbjct: 73 PGAPQPGGAPSY----PGVPPGQGFGVPPGGAGFSGYPQPPSQSYGGGPAQVPLPGGFPG 128
Query: 165 MVCP---PAGQPGMVYPSSGTHG-GAYSAGQP-GMNYSNPSQPGMV 287
P P GQP YPS T +Y P ++YS+ QP V
Sbjct: 129 GQMPSQYPGGQP--TYPSINTDSFSSYPVFSPVSLDYSS-EQPATV 171
Score = 38.1 bits (87), Expect = 0.009
Identities = 43/121 (35%), Positives = 48/121 (39%), Gaps = 12/121 (9%)
Frame = +3
Query: 21 GGVYPH---GGY--APGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQP--GMVCPP 179
GG YP GY A G P PG P G PG P G P P + P G PP
Sbjct: 43 GGAYPQVPSSGYPGAGGYP-APGGYPAPGGYPG-APQPGGAPSY---PGVPPGQGFGVPP 97
Query: 180 --AGQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGM---TYPQGGMTYP 344
AG G P S ++GG P+Q + P PGG YP G TYP
Sbjct: 98 GGAGFSGYPQPPSQSYGG------------GPAQ--VPLPGGFPGGQMPSQYPGGQPTYP 143
Query: 345 S 347
S
Sbjct: 144 S 144
>sp|Q21184|YXWK_CAEEL Putative cuticle collagen F55C10.3
Length = 266
Score = 56.6 bits (135), Expect = 2e-08
Identities = 51/132 (38%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Frame = +3
Query: 18 PGGVYPHGGYAPGVPHQPGMVYPPA--GQPGMVYPPAGQPGMIYPPAIQPGMVCP--PAG 185
PG P G PG P +PG P G PG +PP I PP QP CP P G
Sbjct: 69 PGAAGPAG--TPGKPGRPGKPGAPGLPGNPG--HPPQQPCDPITPPPCQP---CPQGPPG 121
Query: 186 QPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYP----QGGMTYPSGP 353
PG P SG GG + G PG + P PG P+ P G P Q G PS P
Sbjct: 122 PPGPPGP-SGDAGGNGNPGSPGQD-GQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEP 179
Query: 354 STGYNPGVPPGS 389
T PG P G+
Sbjct: 180 ITPGAPG-PQGT 190
Score = 42.4 bits (98), Expect = 5e-04
Identities = 41/113 (36%), Positives = 43/113 (38%), Gaps = 4/113 (3%)
Frame = +3
Query: 3 PGHVQPGGVYPHGGYAPGVPHQPGMVYPPA----GQPGMVYPPAGQPGMIYPPAIQPGMV 170
PG+ P G + G APG P QPG P G PG P G PG PP QPG
Sbjct: 150 PGNKGPSGPNGNPG-APGAPGQPGQDAPSEPITPGAPG----PQGTPGPQGPPG-QPG-- 201
Query: 171 CPPAGQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQG 329
QPG H G A P NP QPG PG P G
Sbjct: 202 -----QPG--------HDGQPGAPGPKGPNGNPGQPGADGNPGAPGQSGTPGG 241
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,535,457
Number of Sequences: 369166
Number of extensions: 1743291
Number of successful extensions: 12357
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10117
length of database: 68,354,980
effective HSP length: 100
effective length of database: 49,881,480
effective search space used: 2294548080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)