Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_025_J04
(579 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3... 111 1e-24
sp|Q19269|NAS14_CAEEL Zinc metalloproteinase nas-14 precurs... 69 6e-12
sp|Q20191|NAS13_CAEEL Zinc metalloproteinase nas-13 precurs... 58 1e-08
sp|P34269|TYR1_CAEEL Putative tyrosinase-like protein tyr-1... 58 1e-08
sp|P30652|YOW6_CAEEL Hypothetical protein ZK643.6 precursor 55 2e-07
sp|P55115|NAS15_CAEEL Zinc metalloproteinase nas-15 precurs... 54 2e-07
sp|Q09662|YS51_CAEEL Hypothetical protein ZK673.1 in chromo... 53 5e-07
sp|O57409|DLLB_BRARE Delta-like protein B precursor (DeltaB... 44 3e-04
sp|P98165|VLDLR_CHICK Very low-density lipoprotein receptor... 42 0.001
sp|Q8VHS2|CRUM1_MOUSE Crumbs protein homolog 1 precursor 42 0.001
>sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3 precursor
Length = 683
Score = 111 bits (278), Expect = 1e-24
Identities = 62/179 (34%), Positives = 81/179 (45%), Gaps = 33/179 (18%)
Frame = +1
Query: 76 EPNTMKEYCSKTCGFCESETEDPNCIDRDRNCQMWSDRGECGINPEAMLVTCKKTCNQCG 255
+P E S+TC + +C + + C WS +GEC NP M V CK +C QC
Sbjct: 438 KPVVTVEVFSETCLKIRLKFFQTSCFNENECCGPWSAKGECQKNPVYMNVWCKASCRQC- 496
Query: 256 NPG-----KCSDYNRNCTKWAREGLCEKNFNFMQKNCKFSCDACQDI-------GDGDNS 399
P +CSD + NC W+R G C KN +M +NC+ SC C G G +S
Sbjct: 497 TPNYNINEECSDRHTNCAMWSRSGECNKNPLWMSENCRSSCQKCGRSRAATCGGGGGADS 556
Query: 400 ---------------------NPNCLNSHESCDTWADRGECASNPGYMLVSCKKACNVC 513
+P C N + C WA RG+C SNPGYM CK +C VC
Sbjct: 557 ISNPTTMPPATNNGQQNTPCDSPMCYNEDQCCPIWAQRGQCRSNPGYMTCQCKVSCGVC 615
Score = 107 bits (266), Expect = 3e-23
Identities = 61/202 (30%), Positives = 82/202 (40%), Gaps = 41/202 (20%)
Frame = +1
Query: 31 NQYCQEWKKSGYCEKEPNTMKEYCSKTCGFCESETE-DPNCIDRDRNCQMWSDRGECGIN 207
N+ C W G C+K P M +C +C C + C DR NC MWS GEC N
Sbjct: 466 NECCGPWSAKGECQKNPVYMNVWCKASCRQCTPNYNINEECSDRHTNCAMWSRSGECNKN 525
Query: 208 PEAMLVTCKKTCNQCG--------------------------NPGK---------CSDYN 282
P M C+ +C +CG N G+ C + +
Sbjct: 526 PLWMSENCRSSCQKCGRSRAATCGGGGGADSISNPTTMPPATNNGQQNTPCDSPMCYNED 585
Query: 283 RNCTKWAREGLCEKNFNFMQKNCKFSCDACQDIGDGDNSNPN-----CLNSHESCDTWAD 447
+ C WA+ G C N +M CK SC C+ PN C + H C WA
Sbjct: 586 QCCPIWAQRGQCRSNPGYMTCQCKVSCGVCR---------PNYVYGPCADYHYDCAAWAR 636
Query: 448 RGECASNPGYMLVSCKKACNVC 513
RGEC N +M +C+++CN C
Sbjct: 637 RGECLKNK-WMPENCRRSCNTC 657
Score = 68.2 bits (165), Expect = 1e-11
Identities = 30/84 (35%), Positives = 43/84 (51%)
Frame = +1
Query: 268 CSDYNRNCTKWAREGLCEKNFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWAD 447
C + N C W+ +G C+KN +M CK SC C N N C + H +C W+
Sbjct: 462 CFNENECCGPWSAKGECQKNPVYMNVWCKASCRQCTP---NYNINEECSDRHTNCAMWSR 518
Query: 448 RGECASNPGYMLVSCKKACNVCGK 519
GEC NP +M +C+ +C CG+
Sbjct: 519 SGECNKNPLWMSENCRSSCQKCGR 542
Score = 56.2 bits (134), Expect = 6e-08
Identities = 25/76 (32%), Positives = 35/76 (46%)
Frame = +1
Query: 31 NQYCQEWKKSGYCEKEPNTMKEYCSKTCGFCESETEDPNCIDRDRNCQMWSDRGECGINP 210
+Q C W + G C P M C +CG C C D +C W+ RGEC +
Sbjct: 585 DQCCPIWAQRGQCRSNPGYMTCQCKVSCGVCRPNYVYGPCADYHYDCAAWARRGEC-LKN 643
Query: 211 EAMLVTCKKTCNQCGN 258
+ M C+++CN C N
Sbjct: 644 KWMPENCRRSCNTCVN 659
Score = 48.1 bits (113), Expect = 2e-05
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 406 NCLNSHESCDTWADRGECASNPGYMLVSCKKACNVCGKKTNV 531
+C N +E C W+ +GEC NP YM V CK +C C N+
Sbjct: 461 SCFNENECCGPWSAKGECQKNPVYMNVWCKASCRQCTPNYNI 502
>sp|Q19269|NAS14_CAEEL Zinc metalloproteinase nas-14 precursor (Nematode astacin 14)
Length = 503
Score = 69.3 bits (168), Expect = 6e-12
Identities = 41/125 (32%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Frame = +1
Query: 16 CEDKPNQYCQEWKKSGYCEKEPNTMKEYCSKTCGFCESE-----TEDPNCIDRDRNCQMW 180
CED N +C W++ G+C+ M YC K C CE E T P + R++ +
Sbjct: 380 CEDL-NAHCGMWEQLGHCQHSVKYMAHYCRKACNLCEVEVTTTTTTTPKPVPRNKEKENK 438
Query: 181 SDRGECGINPEAMLVTCKKTCNQCGNPG-KCSDYNRNCTKWAREGLCEKNFNFMQKNCKF 357
S A T K T P KC D N C+ WA+ G C FM+ CK
Sbjct: 439 SASSTTRGTSTATSTTPKTTTTTTSAPKEKCEDKNLFCSYWAKIGECNSESKFMKIFCKA 498
Query: 358 SCDAC 372
SC C
Sbjct: 499 SCGKC 503
Score = 46.6 bits (109), Expect = 4e-05
Identities = 31/139 (22%), Positives = 50/139 (35%), Gaps = 12/139 (8%)
Frame = +1
Query: 133 TEDPNCIDRDRNCQMWSDRGECGINPEAMLVTCKKTCNQCGNPGKCSDYNRNCTKWAREG 312
+ + C D + +C MW G C + + M C+K CN C + T
Sbjct: 375 SRNKKCEDLNAHCGMWEQLGHCQHSVKYMAHYCRKACNLC-------EVEVTTTTTTTPK 427
Query: 313 LCEKNFNFMQKNCKFSCDACQDIGDGDNSNP------------NCLNSHESCDTWADRGE 456
+N +K K + + ++ P C + + C WA GE
Sbjct: 428 PVPRN---KEKENKSASSTTRGTSTATSTTPKTTTTTTSAPKEKCEDKNLFCSYWAKIGE 484
Query: 457 CASNPGYMLVSCKKACNVC 513
C S +M + CK +C C
Sbjct: 485 CNSESKFMKIFCKASCGKC 503
>sp|Q20191|NAS13_CAEEL Zinc metalloproteinase nas-13 precursor (Nematode astacin 13)
Length = 527
Score = 58.2 bits (139), Expect = 1e-08
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +1
Query: 262 GKCSDYNRNCTKWAREGLCEKNFN--FMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCD 435
GKC D ++C AR G CE F+ FM +NC SC C I + + C ++ C+
Sbjct: 443 GKCEDRRKDCEFLARAGHCESRFSIRFMTENCANSCGKC--IAE-EKRKEVCEDARTWCE 499
Query: 436 TWADRGECASN--PGYMLVSCKKACNVC 513
WA+ G C YM C K+CN C
Sbjct: 500 RWANSGMCNQTVFKDYMRQKCAKSCNFC 527
Score = 46.2 bits (108), Expect = 6e-05
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +1
Query: 16 CEDKPNQYCQEWKKSGYCEKEPNT--MKEYCSKTCGFCESETEDPN-CIDRDRNCQMWSD 186
CED+ C+ ++G+CE + M E C+ +CG C +E + C D C+ W++
Sbjct: 445 CEDRRKD-CEFLARAGHCESRFSIRFMTENCANSCGKCIAEEKRKEVCEDARTWCERWAN 503
Query: 187 RGECG--INPEAMLVTCKKTCNQC 252
G C + + M C K+CN C
Sbjct: 504 SGMCNQTVFKDYMRQKCAKSCNFC 527
Score = 36.6 bits (83), Expect = 0.046
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 13 VCEDKPNQYCQEWKKSGYCEKE--PNTMKEYCSKTCGFC 123
VCED +C+ W SG C + + M++ C+K+C FC
Sbjct: 490 VCEDA-RTWCERWANSGMCNQTVFKDYMRQKCAKSCNFC 527
>sp|P34269|TYR1_CAEEL Putative tyrosinase-like protein tyr-1 precursor
Length = 601
Score = 58.2 bits (139), Expect = 1e-08
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +1
Query: 133 TEDPNCIDRDRNCQMWSDRGECGINPEAMLVTCKKTCNQC---GNPGKCSDYNRNCTKWA 303
T NC + D C WS + EC N M C+K+C C N C D + +C W
Sbjct: 475 TPQSNCYNEDPCCNQWSRQNECRTNTVYMNRYCRKSCGLCQSNDNNRGCHDRHISCAYWR 534
Query: 304 REGLCEKNFNFMQKNCKFSCDAC 372
+ C + +M +NC+ +C C
Sbjct: 535 GQNFCTRRRQWMAENCQATCGWC 557
Score = 58.2 bits (139), Expect = 1e-08
Identities = 22/71 (30%), Positives = 31/71 (43%)
Frame = +1
Query: 40 CQEWKKSGYCEKEPNTMKEYCSKTCGFCESETEDPNCIDRDRNCQMWSDRGECGINPEAM 219
C +W + C M YC K+CG C+S + C DR +C W + C + M
Sbjct: 487 CNQWSRQNECRTNTVYMNRYCRKSCGLCQSNDNNRGCHDRHISCAYWRGQNFCTRRRQWM 546
Query: 220 LVTCKKTCNQC 252
C+ TC C
Sbjct: 547 AENCQATCGWC 557
Score = 54.7 bits (130), Expect = 2e-07
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = +1
Query: 268 CSDYNRNCTKWAREGLCEKNFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWAD 447
C + + C +W+R+ C N +M + C+ SC CQ +++N C + H SC W
Sbjct: 480 CYNEDPCCNQWSRQNECRTNTVYMNRYCRKSCGLCQ----SNDNNRGCHDRHISCAYWRG 535
Query: 448 RGECASNPGYMLVSCKKACNVC 513
+ C +M +C+ C C
Sbjct: 536 QNFCTRRRQWMAENCQATCGWC 557
Score = 41.6 bits (96), Expect = 0.001
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 406 NCLNSHESCDTWADRGECASNPGYMLVSCKKACNVCGKKTN 528
NC N C+ W+ + EC +N YM C+K+C +C N
Sbjct: 479 NCYNEDPCCNQWSRQNECRTNTVYMNRYCRKSCGLCQSNDN 519
>sp|P30652|YOW6_CAEEL Hypothetical protein ZK643.6 precursor
Length = 180
Score = 54.7 bits (130), Expect = 2e-07
Identities = 38/140 (27%), Positives = 56/140 (40%), Gaps = 17/140 (12%)
Frame = +1
Query: 7 ASVCEDKPN-QYCQEWKKSGYCEKEPNTMKEYCSKTCGFCESETEDPN------------ 147
A++C DK C K + + + E C TC C +P
Sbjct: 46 ANLCSDKSKPDICVNLKTLCNSVEFYDKLSEQCPSTCNRCPHNGTNPENKTGGNGGTGTQ 105
Query: 148 -CIDRDRNCQMWSDRGECGINPEAMLV--TCKKTCNQCGNPGKCSDYNRNCTKWAREGLC 318
C D +C +R C + + L+ C KTCN C C D N+ C W G C
Sbjct: 106 ECTDLANDCSYNQNR--CSVKEYSSLMHRLCPKTCNACNI---CEDANKMCPIWVPRGFC 160
Query: 319 EK-NFNFMQKNCKFSCDACQ 375
K + + +QK+C SC+ C+
Sbjct: 161 SKFDHDKVQKSCAKSCNICK 180
Score = 48.5 bits (114), Expect = 1e-05
Identities = 37/159 (23%), Positives = 65/159 (40%), Gaps = 19/159 (11%)
Frame = +1
Query: 94 EYCSKTCGFCESETEDPNCIDRDRNCQMWSDRGECGINP--EAMLVTCKKTCNQC----- 252
E C TCG C + + C D+ + + + C + + C TCN+C
Sbjct: 32 EKCPATCGKCNRKNANL-CSDKSKPDICVNLKTLCNSVEFYDKLSEQCPSTCNRCPHNGT 90
Query: 253 -------GNPG----KCSDYNRNCTKWAREGLCEKNFNFMQKNCKFSCDACQDIGDGDNS 399
GN G +C+D +C+ ++ + M + C +C+AC
Sbjct: 91 NPENKTGGNGGTGTQECTDLANDCSYNQNRCSVKEYSSLMHRLCPKTCNACN-------- 142
Query: 400 NPNCLNSHESCDTWADRGECAS-NPGYMLVSCKKACNVC 513
C ++++ C W RG C+ + + SC K+CN+C
Sbjct: 143 --ICEDANKMCPIWVPRGFCSKFDHDKVQKSCAKSCNIC 179
Score = 34.3 bits (77), Expect = 0.23
Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 13/111 (11%)
Frame = +1
Query: 220 LVTCKKTCNQCG--NPGKCSDYNRNCTKWAREGLCE--KNFNFMQKNCKFSCDAC----- 372
L C TC +C N CSD ++ + LC + ++ + + C +C+ C
Sbjct: 31 LEKCPATCGKCNRKNANLCSDKSKPDICVNLKTLCNSVEFYDKLSEQCPSTCNRCPHNGT 90
Query: 373 ----QDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYMLVSCKKACNVC 513
+ G+G C + C +R M C K CN C
Sbjct: 91 NPENKTGGNGGTGTQECTDLANDCSYNQNRCSVKEYSSLMHRLCPKTCNAC 141
>sp|P55115|NAS15_CAEEL Zinc metalloproteinase nas-15 precursor (Nematode astacin 15)
Length = 571
Score = 54.3 bits (129), Expect = 2e-07
Identities = 37/120 (30%), Positives = 48/120 (40%), Gaps = 17/120 (14%)
Frame = +1
Query: 64 YCEKEPNTMKEYCSKTCGFC--ESETEDPN---CIDRDRNCQMWSDRGECGINPEAMLVT 228
YC+ N MK YC+K+CGFC TE P+ + R +P + T
Sbjct: 452 YCKISQNFMKSYCAKSCGFCFKPPPTEIPDNRPTVVTTRPLVTLPPAVIRSRSPAPPVST 511
Query: 229 CKKTCNQCGN-----------PGKCSDYNRNCTKWAREGLCEKNF-NFMQKNCKFSCDAC 372
K P +CSD C+ W G CE F N+M+KNC SC C
Sbjct: 512 TTKAAPTTSTTSAAPYSPTPLPSECSDRKHFCSHWKSAGFCEGIFMNYMKKNCPASCGLC 571
Score = 39.3 bits (90), Expect = 0.007
Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 6/117 (5%)
Frame = +1
Query: 40 CQEWKKSGYCEKEPNTMKEYCSKTCGFC--ESETEDPNCIDRDRNCQMWSDRGE----CG 201
C + K G+C + P M+ C +CG C ET+ P + + R +
Sbjct: 361 CDDLAKQGWCIRNPGWMRANCPISCGMCIPTKETQKP-YVQTTTQAATTTARPQKPVTQP 419
Query: 202 INPEAMLVTCKKTCNQCGNPGKCSDYNRNCTKWAREGLCEKNFNFMQKNCKFSCDAC 372
I P + T P C D +C + C+ + NFM+ C SC C
Sbjct: 420 IQPLPPVPPLPPT-----TPEDCEDLRVDCLVLVSQRYCKISQNFMKSYCAKSCGFC 471
Score = 37.4 bits (85), Expect = 0.027
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 409 CLNSHESCDTWADRGECASNPGYMLVSCKKACNVC 513
C N CD A +G C NPG+M +C +C +C
Sbjct: 354 CRNLRGDCDDLAKQGWCIRNPGWMRANCPISCGMC 388
Score = 37.4 bits (85), Expect = 0.027
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 10 SVCEDKPNQYCQEWKKSGYCEK-EPNTMKEYCSKTCGFC 123
S C D+ + +C WK +G+CE N MK+ C +CG C
Sbjct: 534 SECSDRKH-FCSHWKSAGFCEGIFMNYMKKNCPASCGLC 571
Score = 36.2 bits (82), Expect = 0.060
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 259 PGKCSDYNRNCTKWAREGLCEKNFNFMQKNCKFSCDAC 372
P +C + +C A++G C +N +M+ NC SC C
Sbjct: 351 PSECRNLRGDCDDLAKQGWCIRNPGWMRANCPISCGMC 388
>sp|Q09662|YS51_CAEEL Hypothetical protein ZK673.1 in chromosome II precursor
Length = 154
Score = 53.1 bits (126), Expect = 5e-07
Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Frame = +1
Query: 7 ASVCEDKPNQYCQEWKKSGYCEKEPNTMKEYCSKTCGFC--ESETEDPNCIDRDRNCQMW 180
AS C D PN C ++ K ++++C KTCGFC S C+D NC W
Sbjct: 64 ASTCADDPNTDCTQYTSLCSNAKYTPLLQQFCPKTCGFCGGGSTAAPVQCVDSSTNCANW 123
Query: 181 SDRGECG---INPEAMLVTCKKTCNQC 252
G C + C KTC C
Sbjct: 124 EKNGFCSSTFYDCANKKQYCAKTCKLC 150
Score = 41.2 bits (95), Expect = 0.002
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 12/60 (20%)
Frame = +1
Query: 229 CKKTCNQCGN-----PGKCSDYNRNCTKWAREGLCEKNF-------NFMQKNCKFSCDAC 372
C KTC CG P +C D + NC W + G C F + K CK C
Sbjct: 95 CPKTCGFCGGGSTAAPVQCVDSSTNCANWEKNGFCSSTFYDCANKKQYCAKTCKLCTTTC 154
>sp|O57409|DLLB_BRARE Delta-like protein B precursor (DeltaB protein)
Length = 615
Score = 43.9 bits (102), Expect = 3e-04
Identities = 45/171 (26%), Positives = 59/171 (34%), Gaps = 6/171 (3%)
Frame = +1
Query: 1 IVASVCEDKP---NQYCQEWKKSGY-CEKEPNTMKEYCSKTCGFCESE--TEDPNCIDRD 162
I+A C D P C+E GY C P C K C + C+D
Sbjct: 347 IIAMTCADDPCFNGGTCEEKFTGGYVCRCPPTFTGSNCEKRLDRCSHKPCANGGECVDLG 406
Query: 163 RNCQMWSDRGECGINPEAMLVTCKKTCNQCGNPGKCSDYNRNCTKWAREGLCEKNFNFMQ 342
+ G G E + C + C N G C D + T C F
Sbjct: 407 ASALCRCRPGFSGSRCETNIDDCARY--PCQNAGTCQDGINDYT-------CTCTLGFTG 457
Query: 343 KNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYMLVSCK 495
KNC DAC +NP CL+ +C T C PG+M +C+
Sbjct: 458 KNCSLRADACL-------TNP-CLHG-GTCFTHFSGPVCQCVPGFMGSTCE 499
Score = 36.2 bits (82), Expect = 0.060
Identities = 41/177 (23%), Positives = 59/177 (33%), Gaps = 36/177 (20%)
Frame = +1
Query: 97 YCSKTCGFCESETEDPN---CIDRDRNCQMWSDR-GECGINPEAMLVTCKKTCNQCGNPG 264
+C++ +C + N C + + + R G G N E + C CN C N G
Sbjct: 266 FCNQDLNYCTNHKPCANGATCTNTGQGSYTCTCRPGFGGTNCELEINECD--CNPCKNGG 323
Query: 265 KCSD-------------YNRNCTKWA---------REGLCEKNF----------NFMQKN 348
C+D Y +NC A G CE+ F F N
Sbjct: 324 SCNDLENDYSCTCPQGFYGKNCEIIAMTCADDPCFNGGTCEEKFTGGYVCRCPPTFTGSN 383
Query: 349 CKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYMLVSCKKACNVCGK 519
C+ D C S+ C N E D A C PG+ C+ + C +
Sbjct: 384 CEKRLDRC--------SHKPCANGGECVDLGAS-ALCRCRPGFSGSRCETNIDDCAR 431
>sp|P98165|VLDLR_CHICK Very low-density lipoprotein receptor precursor (VLDL receptor)
(Vitellogenin receptor) (VTG receptor)
Length = 863
Score = 41.6 bits (96), Expect = 0.001
Identities = 48/173 (27%), Positives = 68/173 (39%), Gaps = 19/173 (10%)
Frame = +1
Query: 43 QEWKKSGYCEKEPNTMKEYC-SKTCGFCESETEDPNCIDRDRNCQMWSDRGECGINPEAM 219
++W+ G + + + + C S+TC + ED NCI R C G+ + +
Sbjct: 272 KKWRCDGDPDCKDGSDEINCPSRTCRPDQFRCEDGNCIHGSRQCN--------GVR-DCL 322
Query: 220 LVTCKKTCN---QCGNPGK-------CSDYNR------NCTKWAREGLCEKNFNFMQKNC 351
T + CN QC PGK C D N+ +C W+ E L E N N N
Sbjct: 323 DGTDEANCNNVIQCSGPGKFKCRSGECIDINKVCNHHGDCKDWSDEPLKECNINECLVNN 382
Query: 352 KFSCDACQDIGDGDNSNPNCLNSHESCD--TWADRGECASNPGYMLVSCKKAC 504
C+D+ G +C E D T D EC NPG C + C
Sbjct: 383 GGCSHICRDLVIGYEC--DCPAGFELVDRRTCGDIDEC-QNPGI----CSQIC 428
>sp|Q8VHS2|CRUM1_MOUSE Crumbs protein homolog 1 precursor
Length = 1405
Score = 41.6 bits (96), Expect = 0.001
Identities = 42/177 (23%), Positives = 68/177 (38%), Gaps = 9/177 (5%)
Frame = +1
Query: 10 SVCEDKPNQYCQEWKKSGYCEKEPNTMKEYCSKTCGFCESE--TEDPNCID--RDRNCQM 177
+ C+D P Y C+ P + E+C + CES+ C+D +C
Sbjct: 236 ATCQDAPGGYS--------CDCAPGFLGEHCELSVNECESQPCLHGGLCVDGRNSYHCDC 287
Query: 178 WSDRGECGINPEAMLVTCKKTCNQCGNPGKCSD----YNRNCTKWAREGLCEKNFNFMQK 345
+ G G++ E+++ C C N C D Y +C LCE + N
Sbjct: 288 -TGSGFTGMHCESLIPLC--WSKPCHNDATCEDTVDSYICHCRPGYTGALCETDINECSS 344
Query: 346 N-CKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYMLVSCKKACNVC 513
N C+F + + +G N L S S A C PG+ + C++ + C
Sbjct: 345 NPCQFWGECVELSSEGLYGNTAGLPSSFSY-VGASGYVCICQPGFTGIHCEEDVDEC 400
Score = 31.2 bits (69), Expect = 1.9
Identities = 31/123 (25%), Positives = 45/123 (36%)
Frame = +1
Query: 145 NCIDRDRNCQMWSDRGECGINPEAMLVTCKKTCNQCGNPGKCSDYNRNCTKWAREGLCEK 324
NC D + G G+N E + CK +QC N C A C
Sbjct: 1189 NCSDGVAAYHCRCEPGYTGVNCEVDVDNCKS--HQCAN-------GATCVPEAHGYSCLC 1239
Query: 325 NFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYMLVSCKKAC 504
NF + C+ S G+ + N C N SC + + +C PG+ C++
Sbjct: 1240 FGNFTGRFCRHSRLPSTVCGN-EKRNFTCYNGG-SCSMFQEDWQCMCWPGFTGEWCEEDI 1297
Query: 505 NVC 513
N C
Sbjct: 1298 NEC 1300
Score = 29.3 bits (64), Expect = 7.4
Identities = 38/167 (22%), Positives = 63/167 (37%), Gaps = 16/167 (9%)
Frame = +1
Query: 55 KSGYCEKEPNTMKEYCSKTCGFCESETEDPNCI-----DRDRNCQMWSDRGECGINPEAM 219
K+ +C K + CE +D NC + D++C+ D C +P
Sbjct: 23 KNSFCNKNNTRCLSGPCQNNSTCEHFPQDNNCCLDTANNLDKDCEDLKD--PCFSSPCQG 80
Query: 220 LVTCKKTCNQCGNPGKCSDYNRNCTKWAREGLCEKNFNFMQKNCKFSCDAC-----QDIG 384
+ TC K PG+ + LC+ + NC+ + ++C Q G
Sbjct: 81 IATCVKI------PGEGNF------------LCQCPPGYSGLNCETATNSCGGNLCQHGG 122
Query: 385 D--GDNSNPNCL----NSHESCDTWADRGECASNPGYMLVSCKKACN 507
D +P C+ + C+T D ECAS+P + C+ N
Sbjct: 123 TCRKDPEHPVCICPPGYAGRFCET--DHNECASSPCHNGAMCQDGIN 167
Score = 28.9 bits (63), Expect = 9.6
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Frame = +1
Query: 229 CKKTCNQCGNPGKCSDYNRNCTKWAREG-LCEKNFNFMQKNCKFSCDACQDIGDGDNSNP 405
C K +C + G C + N C + ++ C N + K+C +D+ D S+P
Sbjct: 27 CNKNNTRCLS-GPCQN-NSTCEHFPQDNNCCLDTANNLDKDC-------EDLKDPCFSSP 77
Query: 406 NCLNSHESCDTWADRGE--CASNPGYMLVSCKKACNVCG 516
+C G C PGY ++C+ A N CG
Sbjct: 78 --CQGIATCVKIPGEGNFLCQCPPGYSGLNCETATNSCG 114
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,630,779
Number of Sequences: 369166
Number of extensions: 1758681
Number of successful extensions: 5871
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5742
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4259329035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)