Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_025_I23
(801 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O95396|MOCS3_HUMAN Molybdenum cofactor synthesis protein... 285 1e-76
sp|Q9ZNW0|MOC3_ARATH Molybdenum cofactor synthesis protein ... 246 7e-65
sp|P38820|YHR1_YEAST Hypothetical 49.4 kDa protein in CDC12... 215 1e-55
sp|Q09810|YABA_SCHPO Hypothetical protein C2G11.10c in chro... 206 5e-53
sp|P12282|MOEB_ECOLI Molybdopterin biosynthesis protein moeB 139 1e-32
sp|Q56067|MOEB_SALTY Molybdopterin biosynthesis protein moeB 135 2e-31
sp|P51335|YCXH_PORPU Hypothetical 43.4 kDa protein in rpl9-... 133 6e-31
sp|P30138|THIF_ECOLI Adenylyltransferase thiF 123 5e-28
sp|P45211|MOEB_HAEIN Molybdopterin biosynthesis protein moeB 117 3e-26
sp|P18500|HESA_ANASP Protein hesA 88 3e-17
>sp|O95396|MOCS3_HUMAN Molybdenum cofactor synthesis protein 3 (Molybdopterin synthase
sulfurylase) (MPT synthase sulfurylase)
Length = 460
Score = 285 bits (728), Expect = 1e-76
Identities = 130/266 (48%), Positives = 186/266 (69%)
Frame = +3
Query: 3 IGLVDHDIVDESNLHRQICHKESKIGXXXXXXXXXXXXMLNSSINIVHHKVLINSENAID 182
+GLVD+D+V+ SNL RQ+ H E+ G LNS++ V + + A+D
Sbjct: 109 LGLVDYDVVEMSNLARQVLHGEALAGQAKAFSAAASLRRLNSAVECVPYTQALTPATALD 168
Query: 183 IIKNYDVVLDCTDNVVTRYLINDCCVILKKPLVSASALGLEGQLTVYNYNNGPCYRCLFP 362
+++ YDVV DC+DNV TRYL+ND CV+ +PLVSASAL EGQ+TVY+Y+ GPCYRC+FP
Sbjct: 169 LVRRYDVVADCSDNVPTRYLVNDACVLAGRPLVSASALRFEGQITVYHYDGGPCYRCIFP 228
Query: 363 VPPPANTVTNCNEGGVLGTVPGMLGTLQATETIKIITQIGSTYSGKMLLYDAESGNFRNI 542
PPPA TVTNC +GGVLG V G+LG LQA E +KI +G +YSG +LL+DA G+FR+I
Sbjct: 229 QPPPAETVTNCADGGVLGVVTGVLGCLQALEVLKIAAGLGPSYSGSLLLFDALRGHFRSI 288
Query: 543 KLRPRNNNCEVCGDNPSIREPIDYQKFCNAKPSDACGGKLSILSPCDRISVSEYSSILET 722
+LR R +C CG+ P++ + +DY+ FC + +D C L +LSP +R+SV++Y +L++
Sbjct: 289 RLRSRRLDCAACGERPTVTDLLDYEAFCGSSATDKC-RSLQLLSPEERVSVTDYKRLLDS 347
Query: 723 NQPHILIDVRPQVQIDTCRFTNAIQL 800
H+L+DVRPQV++D CR +A+ +
Sbjct: 348 GAFHLLLDVRPQVEVDICRLPHALHI 373
>sp|Q9ZNW0|MOC3_ARATH Molybdenum cofactor synthesis protein 3 (Molybdopterin synthase
sulfurylase) (MPT synthase sulfurylase)
Length = 464
Score = 246 bits (627), Expect = 7e-65
Identities = 116/255 (45%), Positives = 166/255 (65%), Gaps = 4/255 (1%)
Frame = +3
Query: 3 IGLVDHDIVDESNLHRQICHKESKIGXXXXXXXXXXXXMLNSSINIVHHKVLINSENAID 182
+G++DHD+V+ +N+HRQI H E+ IG +NS+I + + + + NA++
Sbjct: 118 LGIIDHDVVELNNMHRQIIHTEAFIGHPKVKSAAAACRSINSTIKVDEYVEALRTSNALE 177
Query: 183 IIKNYDVVLDCTDNVVTRYLINDCCVILKKPLVSASALGLEGQLTVYNYNNGPCYRCLFP 362
I+ YD+++D TDN +RY+I+DCCV+L KPLVS +ALG+EGQLTVYN+N GPCYRCLFP
Sbjct: 178 ILSQYDIIVDATDNPPSRYMISDCCVLLGKPLVSGAALGMEGQLTVYNHNGGPCYRCLFP 237
Query: 363 VPPPANTVTNCNEGGVLGTVPGMLGTLQATETIKIITQIGSTYSGKMLLYDAESGNFRNI 542
PPP + C++ GVLG VPG++G LQA ETIK+ + +G S +MLL+DA S R +
Sbjct: 238 TPPPTSACQRCSDSGVLGVVPGVIGCLQALETIKLASLVGEPLSERMLLFDALSARMRIV 297
Query: 543 KLRPRNNNCEVCGDNPSIR----EPIDYQKFCNAKPSDACGGKLSILSPCDRISVSEYSS 710
K+R R++ C VCGDN S + DY+ F G L++L RIS E+
Sbjct: 298 KIRGRSSQCTVCGDNSSFNKQTFKDFDYEDFTQ---FPLFAGPLNLLPAESRISSKEFKE 354
Query: 711 ILETNQPHILIDVRP 755
IL+ + H+L+DVRP
Sbjct: 355 ILQKKEQHVLLDVRP 369
>sp|P38820|YHR1_YEAST Hypothetical 49.4 kDa protein in CDC12-ORC6 intergenic region
Length = 440
Score = 215 bits (548), Expect = 1e-55
Identities = 115/279 (41%), Positives = 162/279 (58%), Gaps = 13/279 (4%)
Frame = +3
Query: 3 IGLVDHDIVDESNLHRQICHKESKIGXXXXXXXXXXXXMLNSSINIVHHKVLINSENAID 182
IG+VD+D+V+ SNLHRQ+ H S++G LN IN+V + V +NS NA D
Sbjct: 94 IGIVDNDVVETSNLHRQVLHDSSRVGMLKCESARQYITKLNPHINVVTYPVRLNSSNAFD 153
Query: 183 IIKNYDVVLDCTDNVVTRYLINDCCVILKKPLVSASALGLEGQLTVYNYNN-GPCYRCLF 359
I K Y+ +LDCTD+ +TRYL++D V L +VSAS LG EGQLT+ N+NN GPCYRC +
Sbjct: 154 IFKGYNYILDCTDSPLTRYLVSDVAVNLGITVVSASGLGTEGQLTILNFNNIGPCYRCFY 213
Query: 360 PVPPPANTVTNCNEGGVLGTVPGMLGTLQATETIKIITQI--GSTYSGKMLLYDA-ESGN 530
P PPP N VT+C EGGV+G G++GT+ A ET+K+I I +S ++LY +
Sbjct: 214 PTPPPPNAVTSCQEGGVIGPCIGLVGTMMAVETLKLILGIYTNENFSPFLMLYSGFPQQS 273
Query: 531 FRNIKLRPRNNNCEVCGDNPSI------REPIDYQKFCNAKPSDACGGKLSILSPCDRIS 692
R K+R R C CG N +I + I+Y+ FC A+ + C P +RIS
Sbjct: 274 LRTFKMRGRQEKCLCCGKNRTITKEAIEKGEINYELFCGARNYNVC-------EPDERIS 326
Query: 693 VSEYSSILETNQ---PHILIDVRPQVQIDTCRFTNAIQL 800
V + I + ++ HI +DVRP + F A+ +
Sbjct: 327 VDAFQRIYKDDEFLAKHIFLDVRPSHHYEISHFPEAVNI 365
>sp|Q09810|YABA_SCHPO Hypothetical protein C2G11.10c in chromosome I
Length = 401
Score = 206 bits (525), Expect = 5e-53
Identities = 117/271 (43%), Positives = 162/271 (59%), Gaps = 12/271 (4%)
Frame = +3
Query: 3 IGLVDHDIVDESNLHRQICHKESKIGXXXXXXXXXXXXMLNSSINIVHHKVLINSENAID 182
+G++D D+VD+SNLHRQI H SK G LN ++ I + ++ N
Sbjct: 70 LGIMDGDVVDKSNLHRQIIHSTSKQGMHKAISAKQFLEDLNPNVIINTYLEFASASNLFS 129
Query: 183 IIKNYDVVLDCTDNVVTRYLINDCCVILKKPLVSASALGLEGQLTVYNYNNGPCYRCLFP 362
II+ YDVVLDCTDN TRYLI+D CV+L +PLVSASAL LEGQL +YNY NGPCYRC+FP
Sbjct: 130 IIEQYDVVLDCTDNQYTRYLISDTCVLLGRPLVSASALKLEGQLCIYNYCNGPCYRCMFP 189
Query: 363 VPPPANTVTNCNEGGVLGTVPGMLGTLQATETIKIITQIG----STYSGKMLLYDA-ESG 527
P P V +C + G+LG V G +GT+QA ET+K+I I + MLL+ A +
Sbjct: 190 NPTP--VVASCAKSGILGPVVGTMGTMQALETVKLILHINGIKKDQFDPYMLLFHAFKVP 247
Query: 528 NFRNIKLRPRNNNCEVCGDNPSI------REPIDYQKFCNAKPSDACGGKLSILSPCDRI 689
+++I++RPR +C+ CG N + P +Y C+ P+ + L+P RI
Sbjct: 248 QWKHIRIRPRQQSCKACGPNKMLSREFMESSPKEYTTICDYVPTLS-----KQLAPIRRI 302
Query: 690 SVSEYSSILETNQPHI-LIDVRPQVQIDTCR 779
S + +++ET+ PHI +DVR VQ CR
Sbjct: 303 SALDLKNLIETS-PHITFLDVREPVQFGICR 332
>sp|P12282|MOEB_ECOLI Molybdopterin biosynthesis protein moeB
Length = 249
Score = 139 bits (349), Expect = 1e-32
Identities = 77/192 (40%), Positives = 107/192 (55%), Gaps = 1/192 (0%)
Frame = +3
Query: 9 LVDHDIVDESNLHRQICHKESKIGXXXXXXXXXXXXMLNSSINIVHHKVLINSENAIDII 188
L+D D V SNL RQ H ++ +G +N I I L++ +I
Sbjct: 60 LLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLDDAELAALI 119
Query: 189 KNYDVVLDCTDNVVTRYLINDCCVILKKPLVSASALGLEGQLTVYNYNNG-PCYRCLFPV 365
+D+VLDCTDNV R +N C K PLVS +A+ +EGQ+TV+ Y +G PCYRCL +
Sbjct: 120 AEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQITVFTYQDGEPCYRCLSRL 179
Query: 366 PPPANTVTNCNEGGVLGTVPGMLGTLQATETIKIITQIGSTYSGKMLLYDAESGNFRNIK 545
C E GV+ + G++G+LQA E IK++ G SGK+++YDA + FR +K
Sbjct: 180 --FGENALTCVEAGVMAPLIGVIGSLQAMEAIKMLAGYGKPASGKIVMYDAMTCQFREMK 237
Query: 546 LRPRNNNCEVCG 581
L RN CEVCG
Sbjct: 238 LM-RNPGCEVCG 248
>sp|Q56067|MOEB_SALTY Molybdopterin biosynthesis protein moeB
Length = 249
Score = 135 bits (339), Expect = 2e-31
Identities = 74/192 (38%), Positives = 105/192 (54%), Gaps = 1/192 (0%)
Frame = +3
Query: 9 LVDHDIVDESNLHRQICHKESKIGXXXXXXXXXXXXMLNSSINIVHHKVLINSENAIDII 188
L+D D V SNL RQ H ++ +G +N I I ++ + +I
Sbjct: 60 LLDFDTVSVSNLQRQTLHSDATVGQPKVESARDALARINPHITITPVNARLDDDAMTSLI 119
Query: 189 KNYDVVLDCTDNVVTRYLINDCCVILKKPLVSASALGLEGQLTVYNY-NNGPCYRCLFPV 365
+ +VLDCTDNV R +N C K PL+S +A+ +EGQ+TV+ Y N PCYRCL +
Sbjct: 120 AGHSLVLDCTDNVSVRNQLNAGCYTAKVPLISGAAIRMEGQVTVFTYRENEPCYRCLSRL 179
Query: 366 PPPANTVTNCNEGGVLGTVPGMLGTLQATETIKIITQIGSTYSGKMLLYDAESGNFRNIK 545
C E GV+ + G++G+LQA E IK++ G SGK+++YDA + FR +K
Sbjct: 180 --FGENALTCVEAGVMAPLIGVIGSLQAMEAIKLLAHYGQPASGKIVMYDAMTCQFREMK 237
Query: 546 LRPRNNNCEVCG 581
L RN CEVCG
Sbjct: 238 LM-RNPGCEVCG 248
>sp|P51335|YCXH_PORPU Hypothetical 43.4 kDa protein in rpl9-rpl11 intergenic region
(ORF382)
Length = 382
Score = 133 bits (334), Expect = 6e-31
Identities = 88/270 (32%), Positives = 133/270 (49%), Gaps = 4/270 (1%)
Frame = +3
Query: 3 IGLVDHDIVDESNLHRQICHKESKIGXXXXXXXXXXXXMLNSSINIVHHKVLINSENAID 182
IG+VD+DI+D SNL RQI + + IG +N + N+ + S NAI+
Sbjct: 65 IGIVDNDIIDISNLQRQILYTVNDIGLSKAYIAKKKILEINPTCNVQIFNTRLQSINAIE 124
Query: 183 IIKNYDVVLDCTDNVVTRYLINDCCVILKKPLVSASALGLEGQLTVYNYNNGPCYRCLF- 359
II+ YD+++D TDN +RY+I+D C+ L K + + EGQ++ +NY GP YR
Sbjct: 125 IIRQYDIIIDGTDNFGSRYIISDSCLELNKIHIYGAIFQFEGQVSTFNYQGGPKYRDFHN 184
Query: 360 PVPPPANTVTNCNEGGVLGTVPGMLGTLQATETIKIITQIGSTYSGKMLLYDAESGNFRN 539
+ N C+ GVLG +PG++GTLQATE IKII S SG +L Y+A + +F
Sbjct: 185 NIETENNPEDTCSNAGVLGLLPGIIGTLQATEAIKIILGYKSVLSGIILKYNAMTISFEK 244
Query: 540 IKLRPRNNNCEVCGDNPSIREPIDYQKFCNAKPSDACGGKL--SILSPCDRISVSEYSSI 713
K I + +F ++P L + P I V E +
Sbjct: 245 FK--------------------IIHTQFILSQPKKKIKSLLVGNSSYPVQEIDVIELQNE 284
Query: 714 LETNQ-PHILIDVRPQVQIDTCRFTNAIQL 800
L N +I++DVR + + + A+ L
Sbjct: 285 LYRNSFKYIILDVRSKEEYEESHLDKAVNL 314
>sp|P30138|THIF_ECOLI Adenylyltransferase thiF
Length = 251
Score = 123 bits (309), Expect = 5e-28
Identities = 78/193 (40%), Positives = 103/193 (53%), Gaps = 2/193 (1%)
Frame = +3
Query: 9 LVDHDIVDESNLHRQICHKESKIGXXXXXXXXXXXXMLNSSINIVHHKVLINSENAIDII 188
L D D V SNL RQI I LN I + + + E D +
Sbjct: 57 LADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAV 116
Query: 189 KNYDVVLDCTDNVVTRYLINDCCVILKKPLVSASALGLEGQLTVYN--YNNGPCYRCLFP 362
DVVLDCTDN+ TR IN CV L PL++ASA+G GQL V + G CYRCL+P
Sbjct: 117 ARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMVLTPPWEQG-CYRCLWP 175
Query: 363 VPPPANTVTNCNEGGVLGTVPGMLGTLQATETIKIITQIGSTYSGKMLLYDAESGNFRNI 542
NC GV+G V G++GTLQA E IK+++ I T +G++ L+D +S +R++
Sbjct: 176 --DNQEPERNCRTAGVVGPVVGVMGTLQALEAIKLLSGI-ETPAGELRLFDGKSSQWRSL 232
Query: 543 KLRPRNNNCEVCG 581
LR R + C VCG
Sbjct: 233 ALR-RASGCPVCG 244
>sp|P45211|MOEB_HAEIN Molybdopterin biosynthesis protein moeB
Length = 243
Score = 117 bits (294), Expect = 3e-26
Identities = 67/181 (37%), Positives = 101/181 (55%), Gaps = 1/181 (0%)
Frame = +3
Query: 9 LVDHDIVDESNLHRQICHKESKIGXXXXXXXXXXXXMLNSSINIVHHKVLINSENAIDII 188
L+D D V SNL RQ+ H ++++ +N INI ++ E +II
Sbjct: 60 LLDFDTVSLSNLQRQVLHCDARLNMPKVESAKIALEQINPHINIETINAKLDEEKLAEII 119
Query: 189 KNYDVVLDCTDNVVTRYLINDCCVILKKPLVSASALGLEGQLTVYNYN-NGPCYRCLFPV 365
++D+VLDCTDNV R ++ C +K PL+S +A+ +EGQ++V+ Y N P YR L +
Sbjct: 120 PHFDIVLDCTDNVEIRNQLDRQCNHMKVPLISGAAIRMEGQVSVFTYEPNTPTYRDLSKL 179
Query: 366 PPPANTVTNCNEGGVLGTVPGMLGTLQATETIKIITQIGSTYSGKMLLYDAESGNFRNIK 545
V +C E GVL + G++G +QA E IK+ +IG G++L+ D S N R IK
Sbjct: 180 --FRQNVLSCVEAGVLAPIVGIVGCIQALEAIKVRLKIGKNLCGRLLMIDGFSMNIREIK 237
Query: 546 L 548
L
Sbjct: 238 L 238
>sp|P18500|HESA_ANASP Protein hesA
Length = 252
Score = 87.8 bits (216), Expect = 3e-17
Identities = 56/183 (30%), Positives = 83/183 (45%)
Frame = +3
Query: 39 NLHRQICHKESKIGXXXXXXXXXXXXMLNSSINIVHHKVLINSENAIDIIKNYDVVLDCT 218
+++RQ+ + +G +N I I I SEN ++++ D+ LDC
Sbjct: 55 DMNRQVLMTDDWVGKPRVFKAKETLQAINPDIQIETIHDYITSENVDSLVQSADMALDCA 114
Query: 219 DNVVTRYLINDCCVILKKPLVSASALGLEGQLTVYNYNNGPCYRCLFPVPPPANTVTNCN 398
N R L+N CV +KP+V A+ G+E LT PC C+FP P +
Sbjct: 115 HNFTERDLLNSACVRWRKPMVEAAMDGMEAYLTTIIPGVTPCLSCIFPEKPDWDR----R 170
Query: 399 EGGVLGTVPGMLGTLQATETIKIITQIGSTYSGKMLLYDAESGNFRNIKLRPRNNNCEVC 578
VLG V G L L A E IK+IT ++L D F +L R+ +C VC
Sbjct: 171 GFSVLGAVSGTLACLTALEAIKLITGFSQPLLSQLLTIDLNRMEFAKRRLY-RDRSCPVC 229
Query: 579 GDN 587
G++
Sbjct: 230 GND 232
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,337,353
Number of Sequences: 369166
Number of extensions: 1651819
Number of successful extensions: 4773
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4746
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7570361805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)