Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_025_I18
(387 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q26065|ACT_PLAMG Actin, adductor muscle 254 4e-68
sp|P91754|ACT_LUMRU Actin 253 9e-68
sp|P92176|ACT2_LUMTE Actin-2 253 9e-68
sp|P92182|ACT1_LUMTE Actin-1 253 9e-68
sp|P53458|ACT5_DIPDE Actin-5 253 9e-68
sp|P02578|ACT1_ACACA Actin-1 253 1e-67
sp|P10984|ACT2_CAEEL Actin-2 253 1e-67
sp|P10981|ACT5_DROME Actin-87E 253 1e-67
sp|P53464|ACTM_HELTB Actin, cytoskeletal (M) 253 1e-67
sp|P30163|ACT2_ONCVO Actin-2 253 1e-67
>sp|Q26065|ACT_PLAMG Actin, adductor muscle
Length = 376
Score = 254 bits (649), Expect = 4e-68
Identities = 127/128 (99%), Positives = 128/128 (100%)
Frame = +2
Query: 2 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 181
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 154
Query: 182 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 361
DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 362 EKLCYIAL 385
EKLCY+AL
Sbjct: 215 EKLCYVAL 222
>sp|P91754|ACT_LUMRU Actin
Length = 372
Score = 253 bits (646), Expect = 9e-68
Identities = 126/128 (98%), Positives = 128/128 (100%)
Frame = +2
Query: 2 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 181
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 91 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 150
Query: 182 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 361
DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 151 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 210
Query: 362 EKLCYIAL 385
EKLCY+AL
Sbjct: 211 EKLCYVAL 218
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 253 bits (646), Expect = 9e-68
Identities = 126/128 (98%), Positives = 128/128 (100%)
Frame = +2
Query: 2 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 181
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 154
Query: 182 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 361
DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 362 EKLCYIAL 385
EKLCY+AL
Sbjct: 215 EKLCYVAL 222
>sp|P92182|ACT1_LUMTE Actin-1
Length = 376
Score = 253 bits (646), Expect = 9e-68
Identities = 126/128 (98%), Positives = 128/128 (100%)
Frame = +2
Query: 2 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 181
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 154
Query: 182 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 361
DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 362 EKLCYIAL 385
EKLCY+AL
Sbjct: 215 EKLCYVAL 222
>sp|P53458|ACT5_DIPDE Actin-5
Length = 371
Score = 253 bits (646), Expect = 9e-68
Identities = 126/128 (98%), Positives = 128/128 (100%)
Frame = +2
Query: 2 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 181
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 90 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 149
Query: 182 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 361
DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 150 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 209
Query: 362 EKLCYIAL 385
EKLCY+AL
Sbjct: 210 EKLCYVAL 217
>sp|P02578|ACT1_ACACA Actin-1
Length = 375
Score = 253 bits (645), Expect = 1e-67
Identities = 126/128 (98%), Positives = 127/128 (99%)
Frame = +2
Query: 2 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 181
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 94 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 153
Query: 182 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 361
DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 154 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 213
Query: 362 EKLCYIAL 385
EKLCY+AL
Sbjct: 214 EKLCYVAL 221
>sp|P10984|ACT2_CAEEL Actin-2
Length = 376
Score = 253 bits (645), Expect = 1e-67
Identities = 126/128 (98%), Positives = 127/128 (99%)
Frame = +2
Query: 2 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 181
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 154
Query: 182 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 361
DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 362 EKLCYIAL 385
EKLCY+AL
Sbjct: 215 EKLCYVAL 222
>sp|P10981|ACT5_DROME Actin-87E
Length = 376
Score = 253 bits (645), Expect = 1e-67
Identities = 126/128 (98%), Positives = 128/128 (100%)
Frame = +2
Query: 2 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 181
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 154
Query: 182 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 361
DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 362 EKLCYIAL 385
EKLCY+AL
Sbjct: 215 EKLCYVAL 222
>sp|P53464|ACTM_HELTB Actin, cytoskeletal (M)
Length = 376
Score = 253 bits (645), Expect = 1e-67
Identities = 127/128 (99%), Positives = 127/128 (99%)
Frame = +2
Query: 2 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 181
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 154
Query: 182 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 361
DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 362 EKLCYIAL 385
EKLCY AL
Sbjct: 215 EKLCYTAL 222
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 253 bits (645), Expect = 1e-67
Identities = 126/128 (98%), Positives = 127/128 (99%)
Frame = +2
Query: 2 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 181
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 154
Query: 182 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 361
DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 362 EKLCYIAL 385
EKLCY+AL
Sbjct: 215 EKLCYVAL 222
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,942,597
Number of Sequences: 369166
Number of extensions: 786216
Number of successful extensions: 2678
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2650
length of database: 68,354,980
effective HSP length: 95
effective length of database: 50,805,155
effective search space used: 1676570115
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)