Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_025_G06
(221 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 34 0.090
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 34 0.090
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 34 0.090
sp|P02827|HSP70_XENLA Heat shock 70 kDa protein (HSP70) 32 0.45
sp|Q9I8F9|HSP71_ORYLA Heat shock 70 kDa protein 1 (HSP70-1) 30 1.3
sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein 30 2.2
sp|Q9GSU4|HSP72_DROSI Major heat shock 70 kDa protein Ba (H... 29 2.9
sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70) 29 2.9
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 29 3.8
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 29 3.8
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 34.3 bits (77), Expect = 0.090
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +1
Query: 1 KVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 138
KVCNPI+TK+YQ GPT+EEVD
Sbjct: 601 KVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 34.3 bits (77), Expect = 0.090
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +1
Query: 1 KVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 138
KVCNPI+TK+YQ GPT+EEVD
Sbjct: 601 KVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 34.3 bits (77), Expect = 0.090
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +1
Query: 1 KVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 138
KVCNPI+TK+YQ GPT+EEVD
Sbjct: 601 KVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P02827|HSP70_XENLA Heat shock 70 kDa protein (HSP70)
Length = 647
Score = 32.0 bits (71), Expect = 0.45
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +1
Query: 1 KVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 138
KVC PI+TK+YQ GPT+EEVD
Sbjct: 602 KVCQPIITKLYQGGVPGGVPGGMPGSSCGAQARQGGNSGPTIEEVD 647
>sp|Q9I8F9|HSP71_ORYLA Heat shock 70 kDa protein 1 (HSP70-1)
Length = 639
Score = 30.4 bits (67), Expect = 1.3
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +1
Query: 1 KVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 138
KVCNPI++K+YQ QGPT+EEVD
Sbjct: 603 KVCNPIISKLYQ---------GGMPSGSCREQARADSQGPTIEEVD 639
>sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein
Length = 654
Score = 29.6 bits (65), Expect = 2.2
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +1
Query: 1 KVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQ-GPTVEEVD 138
KVCNPI+TK+YQ GPT+EEVD
Sbjct: 608 KVCNPIITKLYQAGGGMPGGMPGGMPGGMPGSGSKASSGGPTIEEVD 654
>sp|Q9GSU4|HSP72_DROSI Major heat shock 70 kDa protein Ba (Heat shock protein Hsp70Ba)
(HSP70-87C1)
Length = 643
Score = 29.3 bits (64), Expect = 2.9
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +1
Query: 7 CNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 138
C+PIMTKM+Q GPTVEEVD
Sbjct: 600 CSPIMTKMHQQGAGAGAAGGPGANCGQQAGGFGGYSGPTVEEVD 643
>sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70)
Length = 644
Score = 29.3 bits (64), Expect = 2.9
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 1 KVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 138
KVC PI+TK+YQ QGPT+EE+D
Sbjct: 603 KVCQPIITKLYQ----QGGMPTGCCGDQARTSSGDSSQGPTIEEID 644
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 28.9 bits (63), Expect = 3.8
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Frame = +1
Query: 1 KVCNPIMTKMYQ---XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 138
KVCNPI+TK+YQ GPT+EEVD
Sbjct: 601 KVCNPIITKLYQSAGGMPGGMPEGMPGGFPGAGAAPGGGSSGPTIEEVD 649
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 28.9 bits (63), Expect = 3.8
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Frame = +1
Query: 1 KVCNPIMTKMYQ---XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 138
KVCNPI+TK+YQ GPT+EEVD
Sbjct: 601 KVCNPIITKLYQSDGGMPGGMPDGMPGGFQELGAAPGGGSSGPTIEEVD 649
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,825,465
Number of Sequences: 369166
Number of extensions: 57424
Number of successful extensions: 191
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 144
length of database: 68,354,980
effective HSP length: 45
effective length of database: 60,041,905
effective search space used: 1681173340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)