Planarian EST Database


Dr_sW_025_F01

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_025_F01
         (530 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P06882|THYG_RAT  Thyroglobulin precursor                        57   3e-08
sp|O08710|THYG_MOUSE  Thyroglobulin precursor                      56   5e-08
sp|P01267|THYG_BOVIN  Thyroglobulin precursor                      56   6e-08
sp|P31226|SAX_RANCA  Saxiphilin precursor (SAX)                    52   1e-06
sp|P81439|EQST_ACTEQ  Equistatin                                   51   2e-06
sp|P01266|THYG_HUMAN  Thyroglobulin precursor                      51   2e-06
sp|O88322|NID2_MOUSE  Nidogen-2 precursor (NID-2) (Entactin-2)     46   5e-05
sp|Q14112|NID2_HUMAN  Nidogen-2 precursor (NID-2) (Osteonido...    45   8e-05
sp|Q8BKV0|TICN3_MOUSE  Testican-3 precursor (SPARC/osteonect...    45   1e-04
sp|Q9BQ16|TICN3_HUMAN  Testican-3 precursor (SPARC/osteonect...    44   2e-04
>sp|P06882|THYG_RAT Thyroglobulin precursor
          Length = 2768

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
 Frame = +3

Query: 186 PFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGK-TCKCAKDKDDYHKL--- 353
           P C   G Y+ +QC    CWCV+  G E++G  + +   + +   KC K +     L   
Sbjct: 618 PSCTAEGSYEDIQCYAGECWCVNSQGKEVEG--SRVSGGHPRCPTKCEKQRAQMQNLAGA 675

Query: 354 HIRGKMFF---CDVRGNYEKAQCLGSVCFCADENGKQIGSTTVHIAQ 485
              G  FF   C   G +   QC  S C+C D  G+ I  T   I +
Sbjct: 676 QPAGSSFFVPTCTSEGYFLPVQCFNSECYCVDAEGQVIPGTQSTIGE 722

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 14/112 (12%)
 Frame = +3

Query: 174 DVTFPFCEDTGMYKPVQCV--GAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDKDDYH 347
           D   P C + G ++ VQC   G +CWCVD  G E+ G      +  G+   C       H
Sbjct: 47  DEYVPQCSEDGSFQTVQCQNDGQSCWCVDSDGTEVPG-----SRQLGRPTACL-SFCQLH 100

Query: 348 KLHIRGKMFF----------CDVRGNYEKAQC-LGSV-CFCADENGKQIGST 467
           K  I    +           C   GNY   QC L  V C+C D  G ++  T
Sbjct: 101 KQRILLSSYINSTDALYLPQCQDSGNYAPVQCDLQQVQCWCVDTEGMEVYGT 152

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 186 PFCEDTGMYKPVQC-VGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDK 335
           P C   G Y+ VQC +   CWCVD  G EI G      +  G+   CAKD+
Sbjct: 318 PSCHRDGHYQTVQCQMERMCWCVDAQGIEIPG-----TRQQGQPLFCAKDQ 363

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 16/127 (12%)
 Frame = +3

Query: 186  PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYI-----------TGIEKSYGKTCKCA 326
            P C   G ++PVQC      CWCVD  G+ I G +           T  E S       A
Sbjct: 1030 PQCNTIGGWEPVQCHPGTGQCWCVDGWGELIPGSLMARSSQMPQCPTSCELSRANGLISA 1089

Query: 327  KDKDDYHKLHIRGKMF--FCDVRGNYEKAQCLGSVCFCAD-ENGKQIGSTTVHIAQLHTL 497
              +  + +    G +F   C   G Y + Q  G+  +C D  +G+ + + T   AQ   L
Sbjct: 1090 WKQAGHQRNPGPGDLFTPVCLQTGEYVRQQTSGTGAWCVDPSSGEGVPTNTNSSAQCPGL 1149

Query: 498  KCD*IKN 518
             CD +K+
Sbjct: 1150 -CDALKS 1155

 Score = 37.7 bits (86), Expect = 0.017
 Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 3/106 (2%)
 Frame = +3

Query: 165  GAMDVTFPFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDKDDY 344
            G  D+  P C  TG Y   Q  G   WCVD S  E     T         C   K +   
Sbjct: 1100 GPGDLFTPVCLQTGEYVRQQTSGTGAWCVDPSSGEGVPTNTNSSAQCPGLCDALKSRVLS 1159

Query: 345  HKLHIRGKMFFCD-VRGNYEKAQC--LGSVCFCADENGKQIGSTTV 473
             K+ + G    C+ + G +   QC      C+C   +G+++  T V
Sbjct: 1160 RKVGL-GYTPVCEALDGGFSPVQCDLAQGSCWCVLASGEEVPGTRV 1204
>sp|O08710|THYG_MOUSE Thyroglobulin precursor
          Length = 2766

 Score = 56.2 bits (134), Expect = 5e-08
 Identities = 33/100 (33%), Positives = 41/100 (41%), Gaps = 6/100 (6%)
 Frame = +3

Query: 186 PFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDKDDYHKL---H 356
           P C   G Y+ +QC    CWCVD  G E+ G      +    T KC K +     L    
Sbjct: 618 PSCTAGGSYEDIQCYAGECWCVDSRGKELDGSRVRGGRPRCPT-KCEKQRAQMQSLASAQ 676

Query: 357 IRGKMFF---CDVRGNYEKAQCLGSVCFCADENGKQIGST 467
             G  FF   C   G +   QC  S C+C D  G+ I  T
Sbjct: 677 PAGSSFFVPTCTREGYFLPVQCFNSECYCVDTEGQVIPGT 716

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
 Frame = +3

Query: 186 PFCEDTGMYKPVQCV--GAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDKDDYHKLHI 359
           P C + G ++ VQC   G +CWCVD  G E+ G      +  G+   C      + +  +
Sbjct: 51  PQCSEDGSFQTVQCQNDGQSCWCVDSDGREVPG-----SRQLGRPTVCLSFCQLHKQRIL 105

Query: 360 RGKMF---------FCDVRGNYEKAQC-LGSV-CFCADENGKQIGST 467
            G             C   GNY   QC L  V C+C D  G ++  T
Sbjct: 106 LGSYINSTDALYLPQCQDSGNYAPVQCDLQRVQCWCVDTEGMEVYGT 152

 Score = 37.0 bits (84), Expect = 0.030
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +3

Query: 186 PFCEDTGMYKPVQC-VGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDK 335
           P C   G Y+ VQC     CWCVD  G E+ G      +  G+   CA D+
Sbjct: 318 PRCHRDGHYQTVQCQTEGMCWCVDAQGREVPG-----TRQQGQPPSCAADQ 363

 Score = 35.8 bits (81), Expect = 0.066
 Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 3/106 (2%)
 Frame = +3

Query: 165  GAMDVTFPFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDKDDY 344
            G  D+  P C  TG Y   Q  G   WCVD +  E     T         C   K +   
Sbjct: 1100 GPGDLFIPVCLQTGEYVRKQTSGTGTWCVDPASGEGMPVNTNGSAQCPGLCDVLKSRALS 1159

Query: 345  HKLHIRGKMFFCD-VRGNYEKAQC--LGSVCFCADENGKQIGSTTV 473
             K+ + G    C+ + G +   QC      C+C   +G+++  T V
Sbjct: 1160 RKVGL-GYSPVCEALDGAFSPVQCDLAQGSCWCVLGSGEEVPGTRV 1204

 Score = 35.4 bits (80), Expect = 0.087
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +3

Query: 363 GKMFF--CDVRGNYEKAQCLGSVCFCADENGKQIGSTTV 473
           GK F   C   G+YE  QC    C+C D  GK++  + V
Sbjct: 613 GKFFVPSCTAGGSYEDIQCYAGECWCVDSRGKELDGSRV 651

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 36/127 (28%), Positives = 51/127 (40%), Gaps = 16/127 (12%)
 Frame = +3

Query: 186  PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYI-----------TGIEKSYGKTCKCA 326
            P C   G ++PVQC      CWCVD  G+ I G +           T  E S       A
Sbjct: 1030 PQCNMIGGWEPVQCHAGTGQCWCVDGRGEFIPGSLMSRSSQMPQCPTNCELSRASGLISA 1089

Query: 327  KDKDDYHKLHIRGKMFF--CDVRGNYEKAQCLGSVCFCAD-ENGKQIGSTTVHIAQLHTL 497
              +    +    G +F   C   G Y + Q  G+  +C D  +G+ +   T   AQ   L
Sbjct: 1090 WKQAGPQRNPGPGDLFIPVCLQTGEYVRKQTSGTGTWCVDPASGEGMPVNTNGSAQCPGL 1149

Query: 498  KCD*IKN 518
             CD +K+
Sbjct: 1150 -CDVLKS 1155
>sp|P01267|THYG_BOVIN Thyroglobulin precursor
          Length = 2769

 Score = 55.8 bits (133), Expect = 6e-08
 Identities = 33/100 (33%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
 Frame = +3

Query: 186 PFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDKDDYHKL---H 356
           P C   G Y+ VQC    CWCVD  G E+ G      +    T +C K +     L    
Sbjct: 617 PACTAEGSYEEVQCFAGDCWCVDAQGRELAGSRVRGGRPRCPT-ECEKQRARMQSLLGSQ 675

Query: 357 IRGKMFF---CDVRGNYEKAQCLGSVCFCADENGKQIGST 467
             G   F   C  +GN+   QC  S C+C D  G+ I  T
Sbjct: 676 PAGSSLFVPACTSKGNFLPVQCFNSECYCVDTEGQPIPGT 715

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 8/102 (7%)
 Frame = +3

Query: 186 PFCEDTGMYKPVQCV--GAACWCVDDSGDEIKG-YITGIEKSYGKTCKCAKDK---DDYH 347
           P C + G ++ VQC   GA+CWCVD  G E+ G    G   +    C+  K +     Y 
Sbjct: 50  PQCAEDGSFQTVQCGKDGASCWCVDADGREVPGSRQPGRPAACLSFCQLQKQQILLSSYI 109

Query: 348 KLHIRGKMFFCDVRGNYEKAQC--LGSVCFCADENGKQIGST 467
                  +  C   G+Y   QC      C+C D  G ++  T
Sbjct: 110 NSTATSYLPQCQDSGDYSPVQCDLRRRQCWCVDAEGMEVYGT 151

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +3

Query: 186 PFCEDTGMYKPVQCV-GAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDK 335
           P C   G Y+  QC  G  CWCVD  G EI G      +  G+   CA+D+
Sbjct: 317 PSCHPDGEYQAAQCQQGGPCWCVDSRGQEIPG-----TRQRGEPPSCAEDQ 362

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 378 CDVRGNYEKAQCLGSVCFCADENGKQIGSTTV 473
           C   G+YE+ QC    C+C D  G+++  + V
Sbjct: 619 CTAEGSYEEVQCFAGDCWCVDAQGRELAGSRV 650

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +3

Query: 186  PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYIT 287
            P C+  G ++PVQC  A   CWCVD  G+ +   +T
Sbjct: 1029 PQCDAFGGWEPVQCHAATGHCWCVDGKGEYVPTSLT 1064

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = +3

Query: 186  PFCE-DTGMYKPVQCVGA--ACWCVDDSGDEIKG 278
            P C  + G + PVQC  A  +CWCV  SG+E+ G
Sbjct: 1167 PACRAEDGGFSPVQCDPAQGSCWCVLGSGEEVPG 1200

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 174  DVTFPFCEDTGMYKPVQCVGAACWCVDDSGDE 269
            D+  P C +TG +  +Q   A  WCVD +  E
Sbjct: 1102 DLFIPTCLETGEFARLQASEAGTWCVDPASGE 1133
>sp|P31226|SAX_RANCA Saxiphilin precursor (SAX)
          Length = 844

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 13/151 (8%)
 Frame = +3

Query: 54  NNDQCNVGLICDEVCKEDNNAPKCFKRHLDARRLIKSGAMDVTFPFCEDTGMYKPVQCVG 233
           + D  N+  I  E    + +  KC K    A   +    +    P C++ G Y+P QC G
Sbjct: 87  SKDPYNLKPIIAEPYSSNRDLQKCLKERQQA---LAKKMIGHYIPQCDEKGNYQPQQCHG 143

Query: 234 AA--CWCVDDSGDEIKGYITGIEKSYGKTC------KCAKDKDDY--HKLHIRGKMF-FC 380
           +   CWCV+  G++I G  T   ++   TC      KC K++         + G+    C
Sbjct: 144 STGHCWCVNAMGEKISGTNTPPGQTRA-TCERHELPKCLKERQVALGGDEKVLGRFVPQC 202

Query: 381 DVRGNYEKAQCLGSV--CFCADENGKQIGST 467
           D +GNYE  Q  GS    +C +  G++I  T
Sbjct: 203 DEKGNYEPQQFHGSTGYSWCVNAIGEEIAGT 233
>sp|P81439|EQST_ACTEQ Equistatin
          Length = 199

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 14/116 (12%)
 Frame = +3

Query: 162 SGAMDVTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYITGIEKSYGKTCKCAKDK 335
           SG +    P C++TG ++  QC G+   CWCVD+ G EI G  T I  S      C++ K
Sbjct: 14  SGLIGAYVPQCKETGEFEEKQCWGSTGYCWCVDEDGKEILG--TKIRGS----PDCSRRK 67

Query: 336 DDYHKLHIRGKMFF----------CDVRGNYEKAQCLGS--VCFCADENGKQIGST 467
                  +   +            C   G++++ QC  S   C+C D+ GK++  T
Sbjct: 68  AALTLCQMMQAIIVNVPGWCGPPSCKADGSFDEVQCCASNGECYCVDKKGKELEGT 123

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 13/103 (12%)
 Frame = +3

Query: 9   TCIFSSKLEEFDVCGNNDQCNVGLICDEVCKE-----DNNAPKCFKRHL----DARRLIK 161
           +C      +E   C +N +C      D+  KE         P C +RHL    +AR    
Sbjct: 91  SCKADGSFDEVQCCASNGEC---YCVDKKGKELEGTRQKGRPSC-ERHLSPCEEARLQAH 146

Query: 162 SGAMDVTF--PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKG 278
           S ++ V    P C + G Y PVQC  +   CWCVD+ G ++ G
Sbjct: 147 SNSLRVGMFVPQCLEDGSYNPVQCWPSTGYCWCVDEGGVKVPG 189

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = +3

Query: 378 CDVRGNYEKAQCLGSV--CFCADENGKQIGSTTV 473
           C   G +E+ QC GS   C+C DE+GK+I  T +
Sbjct: 24  CKETGEFEEKQCWGSTGYCWCVDEDGKEILGTKI 57
>sp|P01266|THYG_HUMAN Thyroglobulin precursor
          Length = 2768

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
 Frame = +3

Query: 186 PFCEDTGMYKPVQCVGAACWCVDDSGDEIKG-YITGIEKSYGKTCKCAKDK-DDYHKLHI 359
           P C   G Y+ VQC    CWCV+  G E+ G  + G +      C+  + +         
Sbjct: 618 PSCTTEGSYEDVQCFSGECWCVNSWGKELPGSRVRGGQPRCPTDCEKQRARMQSLMGSQP 677

Query: 360 RGKMFF---CDVRGNYEKAQCLGSVCFCADENGKQIGST 467
            G   F   C   G++   QC  S C+C D  G+ I  T
Sbjct: 678 AGSTLFVPACTSEGHFLPVQCFNSECYCVDAEGQAIPGT 716

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
 Frame = +3

Query: 138 LDARRLIKSGAMDVT----FPFCEDTGMYKPVQC--VGAACWCVDDSGDEIKGYITGIEK 299
           L  ++++ SG ++ T     P C+D+G Y PVQC      CWCVD  G E+ G      +
Sbjct: 98  LQKQQILLSGYINSTDTSYLPQCQDSGDYAPVQCDVQQVQCWCVDAEGMEVYG-----TR 152

Query: 300 SYGKTCKCAKDKDDYHKLHIRG----KMFFCDVRGNYEKAQC 413
             G+  +C +  +  ++  + G        C   G +   QC
Sbjct: 153 QLGRPKRCPRSCEIRNRRLLHGVGDKSPPQCSAEGEFMPVQC 194

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
 Frame = +3

Query: 144  ARRLIKSGAMDVTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYITGIEKSYGK-- 311
            A  L++SG      P C+  G ++PVQC      CWCVD+ G  I G +T       +  
Sbjct: 1018 ASALLRSGPY---MPQCDAFGSWEPVQCHAGTGHCWCVDEKGGFIPGSLTARSLQIPQCP 1074

Query: 312  -TCKCAKD-------KDDYHKLHIRGKMFF---CDVRGNYEKAQCLGSVCFCAD-ENGKQ 455
             TC+ ++        K    + +   K  F   C   G Y + Q  G+  +C D  +G++
Sbjct: 1075 TTCEKSRTSGLLSSWKQARSQENPSPKDLFVPACLETGEYARLQASGAGTWCVDPASGEE 1134

Query: 456  IGSTTVHIAQLHTLKCD*IKN 518
            +   +   AQ  +L C+ +K+
Sbjct: 1135 LRPGSSSSAQCPSL-CNVLKS 1154

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = +3

Query: 186 PFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCKC 323
           P C   G + PVQC  + C+CVD  G  I G  + I    GK  KC
Sbjct: 685 PACTSEGHFLPVQCFNSECYCVDAEGQAIPGTRSAI----GKPKKC 726

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
 Frame = +3

Query: 186 PFCEDTGMYKPVQCV--GAACWCVDDSGDEIKG-YITGIEKSYGKTCKCAKDK---DDYH 347
           P C + G ++ VQC   G +CWCV  +G E+ G    G   +    C+  K +     Y 
Sbjct: 50  PQCAEDGSFQTVQCQNDGRSCWCVGANGSEVLGSRQPGRPVACLSFCQLQKQQILLSGYI 109

Query: 348 KLHIRGKMFFCDVRGNYEKAQC--LGSVCFCADENGKQIGST 467
                  +  C   G+Y   QC      C+C D  G ++  T
Sbjct: 110 NSTDTSYLPQCQDSGDYAPVQCDVQQVQCWCVDAEGMEVYGT 151

 Score = 38.1 bits (87), Expect = 0.013
 Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
 Frame = +3

Query: 174  DVTFPFCEDTGMYKPVQCVGAACWCVDD-SGDEIKGYITGIEKSYGKTCKCAKDKDDYHK 350
            D+  P C +TG Y  +Q  GA  WCVD  SG+E++    G   S      C   K     
Sbjct: 1102 DLFVPACLETGEYARLQASGAGTWCVDPASGEELR---PGSSSSAQCPSLCNVLKSGVLS 1158

Query: 351  LHIR-GKMFFCDVR-GNYEKAQC--LGSVCFCADENGKQIGSTTV 473
              +  G +  C    G +   QC      C+C  ++G+++  T V
Sbjct: 1159 RRVSPGYVPACRAEDGGFSPVQCDQAQGSCWCVMDSGEEVPGTRV 1203

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 186 PFCEDTGMYKPVQC-VGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAK 329
           P C   G Y+ VQC     CWCVD  G E+ G      +  G+   CA+
Sbjct: 317 PSCRRNGDYQAVQCQTEGPCWCVDAQGKEMHG-----TRQQGEPPSCAE 360

 Score = 32.3 bits (72), Expect = 0.73
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 378 CDVRGNYEKAQCLGSVCFCADENGKQIGSTTVHIAQ 485
           C   G+YE  QC    C+C +  GK++  + V   Q
Sbjct: 620 CTTEGSYEDVQCFSGECWCVNSWGKELPGSRVRGGQ 655
>sp|O88322|NID2_MOUSE Nidogen-2 precursor (NID-2) (Entactin-2)
          Length = 1403

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 20/117 (17%)
 Frame = +3

Query: 177  VTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYIT-----------GIEKSYGKTC 317
            +  P C+D G + P+QC G+   CWCVD +G E+ G  T             E +     
Sbjct: 986  IHIPQCDDQGNFVPLQCHGSTGFCWCVDRNGHEVPGTQTPPGSTPPHCGPPPEPTQRPRT 1045

Query: 318  KCAKDKD---DYHKLHIRGKMFF--CDVRGNYEKAQCLG--SVCFCADENGKQIGST 467
             C + ++   +++    R   +   CD  G++   QC G    C+C D++G+++  T
Sbjct: 1046 VCERWRESLLEHYGGTPRDDQYVPQCDDLGHFIPLQCHGKSDFCWCVDKDGRELQGT 1102

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +3

Query: 174  DVTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKG 278
            D   P C+D G + P+QC G +  CWCVD  G E++G
Sbjct: 1065 DQYVPQCDDLGHFIPLQCHGKSDFCWCVDKDGRELQG 1101
>sp|Q14112|NID2_HUMAN Nidogen-2 precursor (NID-2) (Osteonidogen)
          Length = 1375

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 21/134 (15%)
 Frame = +3

Query: 129  KRHLDARRLIKSGAMDVTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYIT----- 287
            +RH  A+         +  P C++ G + P+QC G+   CWCVD  G E+ G  T     
Sbjct: 944  QRHAQAQYAYPGARFHI--PQCDEQGNFLPLQCHGSTGFCWCVDPDGHEVPGTQTPPGST 1001

Query: 288  ------GIEKSYGKTCKCAKDKDDYHKLHIRGK------MFFCDVRGNYEKAQCLG--SV 425
                    E +      C + +++  + H  G       +  CD  G++   QC G    
Sbjct: 1002 PPHCGPSPEPTQRPPTICERWRENLLE-HYGGTPRDDQYVPQCDDLGHFIPLQCHGKSDF 1060

Query: 426  CFCADENGKQIGST 467
            C+C D++G+++  T
Sbjct: 1061 CWCVDKDGREVQGT 1074
>sp|Q8BKV0|TICN3_MOUSE Testican-3 precursor (SPARC/osteonectin, CWCV, and Kazal-like
           domains proteoglycan 3)
          Length = 436

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
 Frame = +3

Query: 54  NNDQCNVGLICDEVCKEDNNAPKCFKR--HLDARRLIKSGAMDVTFPFCEDTGMYKPVQC 227
           NN+ C         C +    P C     ++  R+ IK   +    P C++ G YKP QC
Sbjct: 302 NNEWC--------YCFQRQQDPPCHTELSNIQKRQGIKK-LLGQYIPLCDEDGYYKPTQC 352

Query: 228 VGAA--CWCVDDSGDEIKG 278
            G+   CWCVD  G+E+ G
Sbjct: 353 HGSVGQCWCVDRYGNEVVG 371

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 378 CDVRGNYEKAQCLGSV--CFCADENGKQIGSTTVH 476
           CD  G Y+  QC GSV  C+C D  G ++  + ++
Sbjct: 341 CDEDGYYKPTQCHGSVGQCWCVDRYGNEVVGSRIN 375
>sp|Q9BQ16|TICN3_HUMAN Testican-3 precursor (SPARC/osteonectin, CWCV, and Kazal-like
           domains proteoglycan 3)
          Length = 436

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +3

Query: 186 PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKG 278
           P C++ G YKP QC G+   CWCVD  G+E+ G
Sbjct: 339 PLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVMG 371

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 378 CDVRGNYEKAQCLGSV--CFCADENGKQIGSTTVH 476
           CD  G Y+  QC GSV  C+C D  G ++  + ++
Sbjct: 341 CDEDGYYKPTQCHGSVGQCWCVDRYGNEVMGSRIN 375
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,606,968
Number of Sequences: 369166
Number of extensions: 1305201
Number of successful extensions: 3612
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3548
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3600891075
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)