Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_025_F01
(530 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P06882|THYG_RAT Thyroglobulin precursor 57 3e-08
sp|O08710|THYG_MOUSE Thyroglobulin precursor 56 5e-08
sp|P01267|THYG_BOVIN Thyroglobulin precursor 56 6e-08
sp|P31226|SAX_RANCA Saxiphilin precursor (SAX) 52 1e-06
sp|P81439|EQST_ACTEQ Equistatin 51 2e-06
sp|P01266|THYG_HUMAN Thyroglobulin precursor 51 2e-06
sp|O88322|NID2_MOUSE Nidogen-2 precursor (NID-2) (Entactin-2) 46 5e-05
sp|Q14112|NID2_HUMAN Nidogen-2 precursor (NID-2) (Osteonido... 45 8e-05
sp|Q8BKV0|TICN3_MOUSE Testican-3 precursor (SPARC/osteonect... 45 1e-04
sp|Q9BQ16|TICN3_HUMAN Testican-3 precursor (SPARC/osteonect... 44 2e-04
>sp|P06882|THYG_RAT Thyroglobulin precursor
Length = 2768
Score = 57.0 bits (136), Expect = 3e-08
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Frame = +3
Query: 186 PFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGK-TCKCAKDKDDYHKL--- 353
P C G Y+ +QC CWCV+ G E++G + + + + KC K + L
Sbjct: 618 PSCTAEGSYEDIQCYAGECWCVNSQGKEVEG--SRVSGGHPRCPTKCEKQRAQMQNLAGA 675
Query: 354 HIRGKMFF---CDVRGNYEKAQCLGSVCFCADENGKQIGSTTVHIAQ 485
G FF C G + QC S C+C D G+ I T I +
Sbjct: 676 QPAGSSFFVPTCTSEGYFLPVQCFNSECYCVDAEGQVIPGTQSTIGE 722
Score = 47.8 bits (112), Expect = 2e-05
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 14/112 (12%)
Frame = +3
Query: 174 DVTFPFCEDTGMYKPVQCV--GAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDKDDYH 347
D P C + G ++ VQC G +CWCVD G E+ G + G+ C H
Sbjct: 47 DEYVPQCSEDGSFQTVQCQNDGQSCWCVDSDGTEVPG-----SRQLGRPTACL-SFCQLH 100
Query: 348 KLHIRGKMFF----------CDVRGNYEKAQC-LGSV-CFCADENGKQIGST 467
K I + C GNY QC L V C+C D G ++ T
Sbjct: 101 KQRILLSSYINSTDALYLPQCQDSGNYAPVQCDLQQVQCWCVDTEGMEVYGT 152
Score = 39.3 bits (90), Expect = 0.006
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 186 PFCEDTGMYKPVQC-VGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDK 335
P C G Y+ VQC + CWCVD G EI G + G+ CAKD+
Sbjct: 318 PSCHRDGHYQTVQCQMERMCWCVDAQGIEIPG-----TRQQGQPLFCAKDQ 363
Score = 38.9 bits (89), Expect = 0.008
Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 16/127 (12%)
Frame = +3
Query: 186 PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYI-----------TGIEKSYGKTCKCA 326
P C G ++PVQC CWCVD G+ I G + T E S A
Sbjct: 1030 PQCNTIGGWEPVQCHPGTGQCWCVDGWGELIPGSLMARSSQMPQCPTSCELSRANGLISA 1089
Query: 327 KDKDDYHKLHIRGKMF--FCDVRGNYEKAQCLGSVCFCAD-ENGKQIGSTTVHIAQLHTL 497
+ + + G +F C G Y + Q G+ +C D +G+ + + T AQ L
Sbjct: 1090 WKQAGHQRNPGPGDLFTPVCLQTGEYVRQQTSGTGAWCVDPSSGEGVPTNTNSSAQCPGL 1149
Query: 498 KCD*IKN 518
CD +K+
Sbjct: 1150 -CDALKS 1155
Score = 37.7 bits (86), Expect = 0.017
Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 3/106 (2%)
Frame = +3
Query: 165 GAMDVTFPFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDKDDY 344
G D+ P C TG Y Q G WCVD S E T C K +
Sbjct: 1100 GPGDLFTPVCLQTGEYVRQQTSGTGAWCVDPSSGEGVPTNTNSSAQCPGLCDALKSRVLS 1159
Query: 345 HKLHIRGKMFFCD-VRGNYEKAQC--LGSVCFCADENGKQIGSTTV 473
K+ + G C+ + G + QC C+C +G+++ T V
Sbjct: 1160 RKVGL-GYTPVCEALDGGFSPVQCDLAQGSCWCVLASGEEVPGTRV 1204
>sp|O08710|THYG_MOUSE Thyroglobulin precursor
Length = 2766
Score = 56.2 bits (134), Expect = 5e-08
Identities = 33/100 (33%), Positives = 41/100 (41%), Gaps = 6/100 (6%)
Frame = +3
Query: 186 PFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDKDDYHKL---H 356
P C G Y+ +QC CWCVD G E+ G + T KC K + L
Sbjct: 618 PSCTAGGSYEDIQCYAGECWCVDSRGKELDGSRVRGGRPRCPT-KCEKQRAQMQSLASAQ 676
Query: 357 IRGKMFF---CDVRGNYEKAQCLGSVCFCADENGKQIGST 467
G FF C G + QC S C+C D G+ I T
Sbjct: 677 PAGSSFFVPTCTREGYFLPVQCFNSECYCVDTEGQVIPGT 716
Score = 45.4 bits (106), Expect = 8e-05
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
Frame = +3
Query: 186 PFCEDTGMYKPVQCV--GAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDKDDYHKLHI 359
P C + G ++ VQC G +CWCVD G E+ G + G+ C + + +
Sbjct: 51 PQCSEDGSFQTVQCQNDGQSCWCVDSDGREVPG-----SRQLGRPTVCLSFCQLHKQRIL 105
Query: 360 RGKMF---------FCDVRGNYEKAQC-LGSV-CFCADENGKQIGST 467
G C GNY QC L V C+C D G ++ T
Sbjct: 106 LGSYINSTDALYLPQCQDSGNYAPVQCDLQRVQCWCVDTEGMEVYGT 152
Score = 37.0 bits (84), Expect = 0.030
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 186 PFCEDTGMYKPVQC-VGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDK 335
P C G Y+ VQC CWCVD G E+ G + G+ CA D+
Sbjct: 318 PRCHRDGHYQTVQCQTEGMCWCVDAQGREVPG-----TRQQGQPPSCAADQ 363
Score = 35.8 bits (81), Expect = 0.066
Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 3/106 (2%)
Frame = +3
Query: 165 GAMDVTFPFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDKDDY 344
G D+ P C TG Y Q G WCVD + E T C K +
Sbjct: 1100 GPGDLFIPVCLQTGEYVRKQTSGTGTWCVDPASGEGMPVNTNGSAQCPGLCDVLKSRALS 1159
Query: 345 HKLHIRGKMFFCD-VRGNYEKAQC--LGSVCFCADENGKQIGSTTV 473
K+ + G C+ + G + QC C+C +G+++ T V
Sbjct: 1160 RKVGL-GYSPVCEALDGAFSPVQCDLAQGSCWCVLGSGEEVPGTRV 1204
Score = 35.4 bits (80), Expect = 0.087
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +3
Query: 363 GKMFF--CDVRGNYEKAQCLGSVCFCADENGKQIGSTTV 473
GK F C G+YE QC C+C D GK++ + V
Sbjct: 613 GKFFVPSCTAGGSYEDIQCYAGECWCVDSRGKELDGSRV 651
Score = 35.0 bits (79), Expect = 0.11
Identities = 36/127 (28%), Positives = 51/127 (40%), Gaps = 16/127 (12%)
Frame = +3
Query: 186 PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYI-----------TGIEKSYGKTCKCA 326
P C G ++PVQC CWCVD G+ I G + T E S A
Sbjct: 1030 PQCNMIGGWEPVQCHAGTGQCWCVDGRGEFIPGSLMSRSSQMPQCPTNCELSRASGLISA 1089
Query: 327 KDKDDYHKLHIRGKMFF--CDVRGNYEKAQCLGSVCFCAD-ENGKQIGSTTVHIAQLHTL 497
+ + G +F C G Y + Q G+ +C D +G+ + T AQ L
Sbjct: 1090 WKQAGPQRNPGPGDLFIPVCLQTGEYVRKQTSGTGTWCVDPASGEGMPVNTNGSAQCPGL 1149
Query: 498 KCD*IKN 518
CD +K+
Sbjct: 1150 -CDVLKS 1155
>sp|P01267|THYG_BOVIN Thyroglobulin precursor
Length = 2769
Score = 55.8 bits (133), Expect = 6e-08
Identities = 33/100 (33%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Frame = +3
Query: 186 PFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDKDDYHKL---H 356
P C G Y+ VQC CWCVD G E+ G + T +C K + L
Sbjct: 617 PACTAEGSYEEVQCFAGDCWCVDAQGRELAGSRVRGGRPRCPT-ECEKQRARMQSLLGSQ 675
Query: 357 IRGKMFF---CDVRGNYEKAQCLGSVCFCADENGKQIGST 467
G F C +GN+ QC S C+C D G+ I T
Sbjct: 676 PAGSSLFVPACTSKGNFLPVQCFNSECYCVDTEGQPIPGT 715
Score = 44.3 bits (103), Expect = 2e-04
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 8/102 (7%)
Frame = +3
Query: 186 PFCEDTGMYKPVQCV--GAACWCVDDSGDEIKG-YITGIEKSYGKTCKCAKDK---DDYH 347
P C + G ++ VQC GA+CWCVD G E+ G G + C+ K + Y
Sbjct: 50 PQCAEDGSFQTVQCGKDGASCWCVDADGREVPGSRQPGRPAACLSFCQLQKQQILLSSYI 109
Query: 348 KLHIRGKMFFCDVRGNYEKAQC--LGSVCFCADENGKQIGST 467
+ C G+Y QC C+C D G ++ T
Sbjct: 110 NSTATSYLPQCQDSGDYSPVQCDLRRRQCWCVDAEGMEVYGT 151
Score = 40.4 bits (93), Expect = 0.003
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 186 PFCEDTGMYKPVQCV-GAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDK 335
P C G Y+ QC G CWCVD G EI G + G+ CA+D+
Sbjct: 317 PSCHPDGEYQAAQCQQGGPCWCVDSRGQEIPG-----TRQRGEPPSCAEDQ 362
Score = 35.0 bits (79), Expect = 0.11
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 378 CDVRGNYEKAQCLGSVCFCADENGKQIGSTTV 473
C G+YE+ QC C+C D G+++ + V
Sbjct: 619 CTAEGSYEEVQCFAGDCWCVDAQGRELAGSRV 650
Score = 35.0 bits (79), Expect = 0.11
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 186 PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYIT 287
P C+ G ++PVQC A CWCVD G+ + +T
Sbjct: 1029 PQCDAFGGWEPVQCHAATGHCWCVDGKGEYVPTSLT 1064
Score = 33.1 bits (74), Expect = 0.43
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +3
Query: 186 PFCE-DTGMYKPVQCVGA--ACWCVDDSGDEIKG 278
P C + G + PVQC A +CWCV SG+E+ G
Sbjct: 1167 PACRAEDGGFSPVQCDPAQGSCWCVLGSGEEVPG 1200
Score = 30.0 bits (66), Expect = 3.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 174 DVTFPFCEDTGMYKPVQCVGAACWCVDDSGDE 269
D+ P C +TG + +Q A WCVD + E
Sbjct: 1102 DLFIPTCLETGEFARLQASEAGTWCVDPASGE 1133
>sp|P31226|SAX_RANCA Saxiphilin precursor (SAX)
Length = 844
Score = 51.6 bits (122), Expect = 1e-06
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 13/151 (8%)
Frame = +3
Query: 54 NNDQCNVGLICDEVCKEDNNAPKCFKRHLDARRLIKSGAMDVTFPFCEDTGMYKPVQCVG 233
+ D N+ I E + + KC K A + + P C++ G Y+P QC G
Sbjct: 87 SKDPYNLKPIIAEPYSSNRDLQKCLKERQQA---LAKKMIGHYIPQCDEKGNYQPQQCHG 143
Query: 234 AA--CWCVDDSGDEIKGYITGIEKSYGKTC------KCAKDKDDY--HKLHIRGKMF-FC 380
+ CWCV+ G++I G T ++ TC KC K++ + G+ C
Sbjct: 144 STGHCWCVNAMGEKISGTNTPPGQTRA-TCERHELPKCLKERQVALGGDEKVLGRFVPQC 202
Query: 381 DVRGNYEKAQCLGSV--CFCADENGKQIGST 467
D +GNYE Q GS +C + G++I T
Sbjct: 203 DEKGNYEPQQFHGSTGYSWCVNAIGEEIAGT 233
>sp|P81439|EQST_ACTEQ Equistatin
Length = 199
Score = 51.2 bits (121), Expect = 2e-06
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 14/116 (12%)
Frame = +3
Query: 162 SGAMDVTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYITGIEKSYGKTCKCAKDK 335
SG + P C++TG ++ QC G+ CWCVD+ G EI G T I S C++ K
Sbjct: 14 SGLIGAYVPQCKETGEFEEKQCWGSTGYCWCVDEDGKEILG--TKIRGS----PDCSRRK 67
Query: 336 DDYHKLHIRGKMFF----------CDVRGNYEKAQCLGS--VCFCADENGKQIGST 467
+ + C G++++ QC S C+C D+ GK++ T
Sbjct: 68 AALTLCQMMQAIIVNVPGWCGPPSCKADGSFDEVQCCASNGECYCVDKKGKELEGT 123
Score = 44.7 bits (104), Expect = 1e-04
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 13/103 (12%)
Frame = +3
Query: 9 TCIFSSKLEEFDVCGNNDQCNVGLICDEVCKE-----DNNAPKCFKRHL----DARRLIK 161
+C +E C +N +C D+ KE P C +RHL +AR
Sbjct: 91 SCKADGSFDEVQCCASNGEC---YCVDKKGKELEGTRQKGRPSC-ERHLSPCEEARLQAH 146
Query: 162 SGAMDVTF--PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKG 278
S ++ V P C + G Y PVQC + CWCVD+ G ++ G
Sbjct: 147 SNSLRVGMFVPQCLEDGSYNPVQCWPSTGYCWCVDEGGVKVPG 189
Score = 35.0 bits (79), Expect = 0.11
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 378 CDVRGNYEKAQCLGSV--CFCADENGKQIGSTTV 473
C G +E+ QC GS C+C DE+GK+I T +
Sbjct: 24 CKETGEFEEKQCWGSTGYCWCVDEDGKEILGTKI 57
>sp|P01266|THYG_HUMAN Thyroglobulin precursor
Length = 2768
Score = 50.8 bits (120), Expect = 2e-06
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Frame = +3
Query: 186 PFCEDTGMYKPVQCVGAACWCVDDSGDEIKG-YITGIEKSYGKTCKCAKDK-DDYHKLHI 359
P C G Y+ VQC CWCV+ G E+ G + G + C+ + +
Sbjct: 618 PSCTTEGSYEDVQCFSGECWCVNSWGKELPGSRVRGGQPRCPTDCEKQRARMQSLMGSQP 677
Query: 360 RGKMFF---CDVRGNYEKAQCLGSVCFCADENGKQIGST 467
G F C G++ QC S C+C D G+ I T
Sbjct: 678 AGSTLFVPACTSEGHFLPVQCFNSECYCVDAEGQAIPGT 716
Score = 43.1 bits (100), Expect = 4e-04
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Frame = +3
Query: 138 LDARRLIKSGAMDVT----FPFCEDTGMYKPVQC--VGAACWCVDDSGDEIKGYITGIEK 299
L ++++ SG ++ T P C+D+G Y PVQC CWCVD G E+ G +
Sbjct: 98 LQKQQILLSGYINSTDTSYLPQCQDSGDYAPVQCDVQQVQCWCVDAEGMEVYG-----TR 152
Query: 300 SYGKTCKCAKDKDDYHKLHIRG----KMFFCDVRGNYEKAQC 413
G+ +C + + ++ + G C G + QC
Sbjct: 153 QLGRPKRCPRSCEIRNRRLLHGVGDKSPPQCSAEGEFMPVQC 194
Score = 39.7 bits (91), Expect = 0.005
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Frame = +3
Query: 144 ARRLIKSGAMDVTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYITGIEKSYGK-- 311
A L++SG P C+ G ++PVQC CWCVD+ G I G +T +
Sbjct: 1018 ASALLRSGPY---MPQCDAFGSWEPVQCHAGTGHCWCVDEKGGFIPGSLTARSLQIPQCP 1074
Query: 312 -TCKCAKD-------KDDYHKLHIRGKMFF---CDVRGNYEKAQCLGSVCFCAD-ENGKQ 455
TC+ ++ K + + K F C G Y + Q G+ +C D +G++
Sbjct: 1075 TTCEKSRTSGLLSSWKQARSQENPSPKDLFVPACLETGEYARLQASGAGTWCVDPASGEE 1134
Query: 456 IGSTTVHIAQLHTLKCD*IKN 518
+ + AQ +L C+ +K+
Sbjct: 1135 LRPGSSSSAQCPSL-CNVLKS 1154
Score = 38.9 bits (89), Expect = 0.008
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +3
Query: 186 PFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCKC 323
P C G + PVQC + C+CVD G I G + I GK KC
Sbjct: 685 PACTSEGHFLPVQCFNSECYCVDAEGQAIPGTRSAI----GKPKKC 726
Score = 38.5 bits (88), Expect = 0.010
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Frame = +3
Query: 186 PFCEDTGMYKPVQCV--GAACWCVDDSGDEIKG-YITGIEKSYGKTCKCAKDK---DDYH 347
P C + G ++ VQC G +CWCV +G E+ G G + C+ K + Y
Sbjct: 50 PQCAEDGSFQTVQCQNDGRSCWCVGANGSEVLGSRQPGRPVACLSFCQLQKQQILLSGYI 109
Query: 348 KLHIRGKMFFCDVRGNYEKAQC--LGSVCFCADENGKQIGST 467
+ C G+Y QC C+C D G ++ T
Sbjct: 110 NSTDTSYLPQCQDSGDYAPVQCDVQQVQCWCVDAEGMEVYGT 151
Score = 38.1 bits (87), Expect = 0.013
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Frame = +3
Query: 174 DVTFPFCEDTGMYKPVQCVGAACWCVDD-SGDEIKGYITGIEKSYGKTCKCAKDKDDYHK 350
D+ P C +TG Y +Q GA WCVD SG+E++ G S C K
Sbjct: 1102 DLFVPACLETGEYARLQASGAGTWCVDPASGEELR---PGSSSSAQCPSLCNVLKSGVLS 1158
Query: 351 LHIR-GKMFFCDVR-GNYEKAQC--LGSVCFCADENGKQIGSTTV 473
+ G + C G + QC C+C ++G+++ T V
Sbjct: 1159 RRVSPGYVPACRAEDGGFSPVQCDQAQGSCWCVMDSGEEVPGTRV 1203
Score = 35.0 bits (79), Expect = 0.11
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +3
Query: 186 PFCEDTGMYKPVQC-VGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAK 329
P C G Y+ VQC CWCVD G E+ G + G+ CA+
Sbjct: 317 PSCRRNGDYQAVQCQTEGPCWCVDAQGKEMHG-----TRQQGEPPSCAE 360
Score = 32.3 bits (72), Expect = 0.73
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 378 CDVRGNYEKAQCLGSVCFCADENGKQIGSTTVHIAQ 485
C G+YE QC C+C + GK++ + V Q
Sbjct: 620 CTTEGSYEDVQCFSGECWCVNSWGKELPGSRVRGGQ 655
>sp|O88322|NID2_MOUSE Nidogen-2 precursor (NID-2) (Entactin-2)
Length = 1403
Score = 46.2 bits (108), Expect = 5e-05
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 20/117 (17%)
Frame = +3
Query: 177 VTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYIT-----------GIEKSYGKTC 317
+ P C+D G + P+QC G+ CWCVD +G E+ G T E +
Sbjct: 986 IHIPQCDDQGNFVPLQCHGSTGFCWCVDRNGHEVPGTQTPPGSTPPHCGPPPEPTQRPRT 1045
Query: 318 KCAKDKD---DYHKLHIRGKMFF--CDVRGNYEKAQCLG--SVCFCADENGKQIGST 467
C + ++ +++ R + CD G++ QC G C+C D++G+++ T
Sbjct: 1046 VCERWRESLLEHYGGTPRDDQYVPQCDDLGHFIPLQCHGKSDFCWCVDKDGRELQGT 1102
Score = 40.4 bits (93), Expect = 0.003
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 174 DVTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKG 278
D P C+D G + P+QC G + CWCVD G E++G
Sbjct: 1065 DQYVPQCDDLGHFIPLQCHGKSDFCWCVDKDGRELQG 1101
>sp|Q14112|NID2_HUMAN Nidogen-2 precursor (NID-2) (Osteonidogen)
Length = 1375
Score = 45.4 bits (106), Expect = 8e-05
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 21/134 (15%)
Frame = +3
Query: 129 KRHLDARRLIKSGAMDVTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYIT----- 287
+RH A+ + P C++ G + P+QC G+ CWCVD G E+ G T
Sbjct: 944 QRHAQAQYAYPGARFHI--PQCDEQGNFLPLQCHGSTGFCWCVDPDGHEVPGTQTPPGST 1001
Query: 288 ------GIEKSYGKTCKCAKDKDDYHKLHIRGK------MFFCDVRGNYEKAQCLG--SV 425
E + C + +++ + H G + CD G++ QC G
Sbjct: 1002 PPHCGPSPEPTQRPPTICERWRENLLE-HYGGTPRDDQYVPQCDDLGHFIPLQCHGKSDF 1060
Query: 426 CFCADENGKQIGST 467
C+C D++G+++ T
Sbjct: 1061 CWCVDKDGREVQGT 1074
>sp|Q8BKV0|TICN3_MOUSE Testican-3 precursor (SPARC/osteonectin, CWCV, and Kazal-like
domains proteoglycan 3)
Length = 436
Score = 44.7 bits (104), Expect = 1e-04
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +3
Query: 54 NNDQCNVGLICDEVCKEDNNAPKCFKR--HLDARRLIKSGAMDVTFPFCEDTGMYKPVQC 227
NN+ C C + P C ++ R+ IK + P C++ G YKP QC
Sbjct: 302 NNEWC--------YCFQRQQDPPCHTELSNIQKRQGIKK-LLGQYIPLCDEDGYYKPTQC 352
Query: 228 VGAA--CWCVDDSGDEIKG 278
G+ CWCVD G+E+ G
Sbjct: 353 HGSVGQCWCVDRYGNEVVG 371
Score = 31.2 bits (69), Expect = 1.6
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 378 CDVRGNYEKAQCLGSV--CFCADENGKQIGSTTVH 476
CD G Y+ QC GSV C+C D G ++ + ++
Sbjct: 341 CDEDGYYKPTQCHGSVGQCWCVDRYGNEVVGSRIN 375
>sp|Q9BQ16|TICN3_HUMAN Testican-3 precursor (SPARC/osteonectin, CWCV, and Kazal-like
domains proteoglycan 3)
Length = 436
Score = 44.3 bits (103), Expect = 2e-04
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 186 PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKG 278
P C++ G YKP QC G+ CWCVD G+E+ G
Sbjct: 339 PLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVMG 371
Score = 31.2 bits (69), Expect = 1.6
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 378 CDVRGNYEKAQCLGSV--CFCADENGKQIGSTTVH 476
CD G Y+ QC GSV C+C D G ++ + ++
Sbjct: 341 CDEDGYYKPTQCHGSVGQCWCVDRYGNEVMGSRIN 375
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,606,968
Number of Sequences: 369166
Number of extensions: 1305201
Number of successful extensions: 3612
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3548
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3600891075
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)