Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_025_B10
(768 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q26534|CATL_SCHMA Cathepsin L precursor (SMCL1) 278 2e-74
sp|Q9R013|CATF_MOUSE Cathepsin F precursor 266 6e-71
sp|Q9UBX1|CATF_HUMAN Cathepsin F precursor (CATSF) 259 7e-69
sp|Q9VN93|CPR1_DROME Putative cysteine proteinase CG12163 p... 259 7e-69
sp|P04988|CYSP1_DICDI Cysteine proteinase 1 precursor 223 4e-58
sp|P25804|CYSP_PEA Cysteine proteinase 15A precursor (Turgo... 212 8e-55
sp|P43296|RD19A_ARATH Cysteine proteinase RD19a precursor (... 210 4e-54
sp|P43295|A494_ARATH Probable cysteine proteinase A494 prec... 209 7e-54
sp|Q10716|CYSP1_MAIZE Cysteine proteinase 1 precursor 206 4e-53
sp|P14658|CYSP_TRYBB Cysteine proteinase precursor 205 1e-52
>sp|Q26534|CATL_SCHMA Cathepsin L precursor (SMCL1)
Length = 319
Score = 278 bits (710), Expect = 2e-74
Identities = 126/210 (60%), Positives = 157/210 (74%)
Frame = +2
Query: 83 DWRVLGAVTPVKNQGSCGSCWAFSTTGNIEGQWFIRTKRLVSLSEQQLVDCDTVDEGCNG 262
DWR GAVT VKNQG CGSCWAFSTTGN+E QWF +T +L+SLSEQQLVDCD +D+GCNG
Sbjct: 110 DWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGLDDGCNG 169
Query: 263 GLPSQAYKVIQQMGGLETESDYPYKADRKTCMLDKSKIAVYINGSESIDSSETTMAAWCS 442
GLPS AY+ I +MGGL E +YPY A + C L +AVYIN S ++ ET +AAW
Sbjct: 170 GLPSNAYESIIKMGGLMLEDNYPYDAKNEKCHLKTDGVAVYINSSVNLTQDETELAAWLY 229
Query: 443 INGPISIGINAFAMQFYRGGISHPFKIFCNPDHLDHGVLIVGFNTTSSGEPFWIVKNSWG 622
N IS+G+NA +QFY+ GISHP+ IFC+ LDH VL+VG+ + EPFWIVKNSWG
Sbjct: 230 HNSTISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWG 289
Query: 623 PGWGEDGYYRVFRGTGVCGLNKMPTSAIIH 712
WGE+GY+R++RG G CG+N + TSA+I+
Sbjct: 290 VEWGENGYFRMYRGDGSCGINTVATSAMIY 319
>sp|Q9R013|CATF_MOUSE Cathepsin F precursor
Length = 462
Score = 266 bits (679), Expect = 6e-71
Identities = 118/210 (56%), Positives = 151/210 (71%)
Frame = +2
Query: 83 DWRVLGAVTPVKNQGSCGSCWAFSTTGNIEGQWFIRTKRLVSLSEQQLVDCDTVDEGCNG 262
DWR GAVT VKNQG CGSCWAFS TGN+EGQWF+ L+SLSEQ+L+DCD VD+ C G
Sbjct: 254 DWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVDKACLG 313
Query: 263 GLPSQAYKVIQQMGGLETESDYPYKADRKTCMLDKSKIAVYINGSESIDSSETTMAAWCS 442
GLPS AY I+ +GGLETE DY Y+ +TC VYIN S + +E +AAW +
Sbjct: 314 GLPSNAYAAIKNLGGLETEDDYGYQGHVQTCNFSAQMAKVYINDSVELSRNENKIAAWLA 373
Query: 443 INGPISIGINAFAMQFYRGGISHPFKIFCNPDHLDHGVLIVGFNTTSSGEPFWIVKNSWG 622
GPIS+ INAF MQFYR GI+HPF+ C+P +DH VL+VG+ S+ P+W +KNSWG
Sbjct: 374 QKGPISVAINAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNRSN-IPYWAIKNSWG 432
Query: 623 PGWGEDGYYRVFRGTGVCGLNKMPTSAIIH 712
WGE+GYY ++RG+G CG+N M +SA+++
Sbjct: 433 SDWGEEGYYYLYRGSGACGVNTMASSAVVN 462
>sp|Q9UBX1|CATF_HUMAN Cathepsin F precursor (CATSF)
Length = 484
Score = 259 bits (661), Expect = 7e-69
Identities = 116/209 (55%), Positives = 146/209 (69%)
Frame = +2
Query: 83 DWRVLGAVTPVKNQGSCGSCWAFSTTGNIEGQWFIRTKRLVSLSEQQLVDCDTVDEGCNG 262
DWR GAVT VK+QG CGSCWAFS TGN+EGQWF+ L+SLSEQ+L+DCD +D+ C G
Sbjct: 276 DWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMG 335
Query: 263 GLPSQAYKVIQQMGGLETESDYPYKADRKTCMLDKSKIAVYINGSESIDSSETTMAAWCS 442
GLPS AY I+ +GGLETE DY Y+ ++C K VYIN S + +E +AAW +
Sbjct: 336 GLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLA 395
Query: 443 INGPISIGINAFAMQFYRGGISHPFKIFCNPDHLDHGVLIVGFNTTSSGEPFWIVKNSWG 622
GPIS+ INAF MQFYR GIS P + C+P +DH VL+VG+ S PFW +KNSWG
Sbjct: 396 KRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSD-VPFWAIKNSWG 454
Query: 623 PGWGEDGYYRVFRGTGVCGLNKMPTSAII 709
WGE GYY + RG+G CG+N M +SA++
Sbjct: 455 TDWGEKGYYYLHRGSGACGVNTMASSAVV 483
>sp|Q9VN93|CPR1_DROME Putative cysteine proteinase CG12163 precursor
Length = 614
Score = 259 bits (661), Expect = 7e-69
Identities = 120/215 (55%), Positives = 150/215 (69%), Gaps = 6/215 (2%)
Frame = +2
Query: 83 DWRVLGAVTPVKNQGSCGSCWAFSTTGNIEGQWFIRTKRLVSLSEQQLVDCDTVDEGCNG 262
DWR AVT VKNQGSCGSCWAFS TGNIEG + ++T L SEQ+L+DCDT D CNG
Sbjct: 399 DWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCDTTDSACNG 458
Query: 263 GLPSQAYKVIQQMGGLETESDYPYKADRKTCMLDKSKIAVYINGSESI-DSSETTMAAWC 439
GL AYK I+ +GGLE E++YPYKA + C +++ V + G + +ET M W
Sbjct: 459 GLMDNAYKAIKDIGGLEYEAEYPYKAKKNQCHFNRTLSHVQVAGFVDLPKGNETAMQEWL 518
Query: 440 SINGPISIGINAFAMQFYRGGISHPFKIFCNPDHLDHGVLIVGFNTTSSGE-----PFWI 604
NGPISIGINA AMQFYRGG+SHP+K C+ +LDHGVL+VG+ + P+WI
Sbjct: 519 LANGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWI 578
Query: 605 VKNSWGPGWGEDGYYRVFRGTGVCGLNKMPTSAII 709
VKNSWGP WGE GYYRV+RG CG+++M TSA++
Sbjct: 579 VKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 613
>sp|P04988|CYSP1_DICDI Cysteine proteinase 1 precursor
Length = 343
Score = 223 bits (568), Expect = 4e-58
Identities = 113/226 (50%), Positives = 142/226 (62%), Gaps = 15/226 (6%)
Frame = +2
Query: 77 AIDWRVLGAVTPVKNQGSCGSCWAFSTTGNIEGQWFIRTKRLVSLSEQQLVDCD------ 238
A DWR GAVTPVKNQG CGSCW+FSTTGN+EGQ FI +LVSLSEQ LVDCD
Sbjct: 121 AFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEY 180
Query: 239 ----TVDEGCNGGLPSQAYKVIQQMGGLETESDYPYKADRKT-CMLDKSKIAVYINGSES 403
DEGCNGGL AY I + GG++TES YPY A+ T C + + I I+
Sbjct: 181 EGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFTM 240
Query: 404 IDSSETTMAAWCSINGPISIGINAFAMQFYRGGISHPFKIFCNPDHLDHGVLIVGFNTTS 583
I +ET MA + GP++I +A QFY GG+ F I CNP+ LDHG+LIVG++ +
Sbjct: 241 IPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGV---FDIPCNPNSLDHGILIVGYSAKN 297
Query: 584 S----GEPFWIVKNSWGPGWGEDGYYRVFRGTGVCGLNKMPTSAII 709
+ P+WIVKNSWG WGE GY + RG CG++ +++II
Sbjct: 298 TIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSII 343
>sp|P25804|CYSP_PEA Cysteine proteinase 15A precursor (Turgor-responsive protein 15A)
Length = 363
Score = 212 bits (540), Expect = 8e-55
Identities = 105/218 (48%), Positives = 136/218 (62%), Gaps = 15/218 (6%)
Frame = +2
Query: 83 DWRVLGAVTPVKNQGSCGSCWAFSTTGNIEGQWFIRTKRLVSLSEQQLVDCDTV------ 244
DWR GAVTPVK+QGSCGSCWAFSTTG +EG ++ T +LVSLSEQQLVDCD V
Sbjct: 137 DWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQA 196
Query: 245 ---DEGCNGGLPSQAYKVIQQMGGLETESDYPYKADRKTCMLDKSKIAVYINGSESIDSS 415
D GCNGGL + A++ + + GG+ E DY Y +C DKSK+ ++ +
Sbjct: 197 GSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRDGSCKFDKSKVVASVSNFSVVTLD 256
Query: 416 ETTMAAWCSINGPISIGINAFAMQFYRGGISHPFKIFCNPDHLDHGVLIVGFNTTS---- 583
E +AA NGP+++ INA MQ Y G+S P+ C LDHGVL+VGF +
Sbjct: 257 EDQIAANLVKNGPLAVAINAAWMQTYMSGVSCPY--VCAKSRLDHGVLLVGFGKGAYAPI 314
Query: 584 --SGEPFWIVKNSWGPGWGEDGYYRVFRGTGVCGLNKM 691
+P+WI+KNSWG WGE GYY++ RG VCG++ M
Sbjct: 315 RLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVDSM 352
>sp|P43296|RD19A_ARATH Cysteine proteinase RD19a precursor (RD19)
Length = 368
Score = 210 bits (534), Expect = 4e-54
Identities = 108/219 (49%), Positives = 139/219 (63%), Gaps = 16/219 (7%)
Frame = +2
Query: 83 DWRVLGAVTPVKNQGSCGSCWAFSTTGNIEGQWFIRTKRLVSLSEQQLVDC--------- 235
DWR GAVTPVKNQGSCGSCW+FS TG +EG F+ T +LVSLSEQQLVDC
Sbjct: 140 DWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEA 199
Query: 236 DTVDEGCNGGLPSQAYKVIQQMGGLETESDYPYKA-DRKTCMLDKSKIAVYINGSESIDS 412
D+ D GCNGGL + A++ + GGL E DYPY D KTC LDKSKI ++ I
Sbjct: 200 DSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDKSKIVASVSNFSVISI 259
Query: 413 SETTMAAWCSINGPISIGINAFAMQFYRGGISHPFKIFCNPDHLDHGVLIVGFNTTS--- 583
E +AA NGP+++ INA MQ Y GG+S P+ C L+HGVL+VG+
Sbjct: 260 DEEQIAANLVKNGPLAVAINAGYMQTYIGGVSCPY--ICT-RRLNHGVLLVGYGAAGYAP 316
Query: 584 ---SGEPFWIVKNSWGPGWGEDGYYRVFRGTGVCGLNKM 691
+P+WI+KNSWG WGE+G+Y++ +G +CG++ M
Sbjct: 317 ARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSM 355
>sp|P43295|A494_ARATH Probable cysteine proteinase A494 precursor
Length = 361
Score = 209 bits (532), Expect = 7e-54
Identities = 104/222 (46%), Positives = 143/222 (64%), Gaps = 16/222 (7%)
Frame = +2
Query: 74 QAIDWRVLGAVTPVKNQGSCGSCWAFSTTGNIEGQWFIRTKRLVSLSEQQLVDCD----- 238
+ DWR GAVTPVKNQGSCGSCW+FSTTG +EG F+ T +LVSLSEQQLVDCD
Sbjct: 134 EEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDP 193
Query: 239 ----TVDEGCNGGLPSQAYKVIQQMGGLETESDYPYK-ADRKTCMLDKSKIAVYINGSES 403
+ D GCNGGL + A++ + GGL E DYPY D +C LD+SKI ++
Sbjct: 194 EEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLDRSKIVASVSNFSV 253
Query: 404 IDSSETTMAAWCSINGPISIGINAFAMQFYRGGISHPFKIFCNPDHLDHGVLIVGFNTTS 583
+ +E +AA NGP+++ INA MQ Y GG+S P+ C+ L+HGVL+VG+ +
Sbjct: 254 VSINEDQIAANLIKNGPLAVAINAAYMQTYIGGVSCPY--ICS-RRLNHGVLLVGYGSAG 310
Query: 584 SGE------PFWIVKNSWGPGWGEDGYYRVFRGTGVCGLNKM 691
+ P+WI+KNSWG WGE+G+Y++ +G +CG++ +
Sbjct: 311 FSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSL 352
>sp|Q10716|CYSP1_MAIZE Cysteine proteinase 1 precursor
Length = 371
Score = 206 bits (525), Expect = 4e-53
Identities = 106/229 (46%), Positives = 141/229 (61%), Gaps = 19/229 (8%)
Frame = +2
Query: 83 DWRVLGAVTPVKNQGSCGSCWAFSTTGNIEGQWFIRTKRLVSLSEQQLVDCD-------- 238
DWR GAV PVKNQGSCGSCW+FS +G +EG ++ T +L LSEQQ VDCD
Sbjct: 142 DWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEP 201
Query: 239 -TVDEGCNGGLPSQAYKVIQQMGGLETESDYPYKADRKTCMLDKSKIAVYINGSESIDSS 415
+ D GCNGGL + A+ +Q+ GGLE+E DYPY C DKSKI + +
Sbjct: 202 DSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDGKCKFDKSKIVASVQNFSVVSVD 261
Query: 416 ETTMAAWCSINGPISIGINAFAMQFYRGGISHPFKIFCNPDHLDHGVLIVGFNTTS---- 583
E ++A +GP++IGINA MQ Y GG+S P+ C HLDHGVL+VG+ +
Sbjct: 262 EAQISANLIKHGPLAIGINAAYMQTYIGGVSCPY--ICG-RHLDHGVLLVGYGASGFAPI 318
Query: 584 --SGEPFWIVKNSWGPGWGEDGYYRVFRGTGV---CGLNKM-PTSAIIH 712
+P+WI+KNSWG WGE+GYY++ RG+ V CG++ M T + +H
Sbjct: 319 RLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMVSTVSAVH 367
>sp|P14658|CYSP_TRYBB Cysteine proteinase precursor
Length = 450
Score = 205 bits (522), Expect = 1e-52
Identities = 103/220 (46%), Positives = 137/220 (62%), Gaps = 5/220 (2%)
Frame = +2
Query: 65 RTGQAIDWRVLGAVTPVKNQGSCGSCWAFSTTGNIEGQWFIRTKRLVSLSEQQLVDCDTV 244
R A+DWR GAVTPVK QG CGSCWAFST GNIEGQW + LVSLSEQ LV CDT+
Sbjct: 125 RAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTI 184
Query: 245 DEGCNGGLPSQAYK-VIQQMGG-LETESDYPY---KADRKTCMLDKSKIAVYINGSESID 409
D GCNGGL A+ ++ GG + TE+ YPY ++ C ++ +I I +
Sbjct: 185 DSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLP 244
Query: 410 SSETTMAAWCSINGPISIGINAFAMQFYRGGISHPFKIFCNPDHLDHGVLIVGFNTTSSG 589
E +AA+ + NGP++I ++A + Y GGI C LDHGVL+VG+N +S
Sbjct: 245 QDEDAIAAYLAENGPLAIAVDAESFMDYNGGI----LTSCTSKQLDHGVLLVGYN-DNSN 299
Query: 590 EPFWIVKNSWGPGWGEDGYYRVFRGTGVCGLNKMPTSAII 709
P+WI+KNSW WGEDGY R+ +GT C +N+ +SA++
Sbjct: 300 PPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,979,747
Number of Sequences: 369166
Number of extensions: 1748238
Number of successful extensions: 4420
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4042
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7115329200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)