Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_025_A02
(546 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O02192|HSP83_DROAV Heat shock protein 83 (HSP 82) 222 5e-58
sp|P02828|HSP83_DROME Heat shock protein 83 (HSP 82) 221 9e-58
sp|O57521|HS90B_BRARE Heat shock protein HSP 90-beta 219 3e-57
sp|P34058|HS90B_RAT Heat shock protein HSP 90-beta (HSP 84) 218 6e-57
sp|Q04619|HS90B_CHICK Heat shock cognate protein HSP 90-beta 217 2e-56
sp|Q9GKX8|HS90B_HORSE Heat shock protein HSP 90-beta (HSP 84) 217 2e-56
sp|P07900|HS90A_HUMAN Heat shock protein HSP 90-alpha (HSP 86) 217 2e-56
sp|P08238|HS90B_HUMAN Heat shock protein HSP 90-beta (HSP 8... 217 2e-56
sp|O02705|HS90A_PIG Heat shock protein HSP 90-alpha (HSP 86) 217 2e-56
sp|Q9GKX7|HS90A_HORSE Heat shock protein HSP 90-alpha (HSP 86) 217 2e-56
>sp|O02192|HSP83_DROAV Heat shock protein 83 (HSP 82)
Length = 716
Score = 222 bits (565), Expect = 5e-58
Identities = 103/111 (92%), Positives = 108/111 (97%)
Frame = +3
Query: 213 LNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFCPKRAPF 392
LNKTKPIWTRNPDD+SQE+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF P+R PF
Sbjct: 274 LNKTKPIWTRNPDDISQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRTPF 333
Query: 393 DLFENKKKRNNIKLYVRRVFIMDNCEDLIPEYLNFVKGVVDSEDLPLNISR 545
DLFEN+KKRNNIKLYVRRVFIMDNCEDLIPEYLNF+KGVVDSEDLPLNISR
Sbjct: 334 DLFENQKKRNNIKLYVRRVFIMDNCEDLIPEYLNFIKGVVDSEDLPLNISR 384
>sp|P02828|HSP83_DROME Heat shock protein 83 (HSP 82)
Length = 717
Score = 221 bits (563), Expect = 9e-58
Identities = 103/111 (92%), Positives = 108/111 (97%)
Frame = +3
Query: 213 LNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFCPKRAPF 392
LNKTKPIWTRNPDD+SQE+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF P+R PF
Sbjct: 275 LNKTKPIWTRNPDDISQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRTPF 334
Query: 393 DLFENKKKRNNIKLYVRRVFIMDNCEDLIPEYLNFVKGVVDSEDLPLNISR 545
DLFEN+KKRNNIKLYVRRVFIMDNCEDLIPEYLNF+KGVVDSEDLPLNISR
Sbjct: 335 DLFENQKKRNNIKLYVRRVFIMDNCEDLIPEYLNFMKGVVDSEDLPLNISR 385
>sp|O57521|HS90B_BRARE Heat shock protein HSP 90-beta
Length = 725
Score = 219 bits (558), Expect = 3e-57
Identities = 101/111 (90%), Positives = 108/111 (97%)
Frame = +3
Query: 213 LNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFCPKRAPF 392
LNKTKPIWTRNPDD+S E+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF P+RAPF
Sbjct: 281 LNKTKPIWTRNPDDISNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPF 340
Query: 393 DLFENKKKRNNIKLYVRRVFIMDNCEDLIPEYLNFVKGVVDSEDLPLNISR 545
DLFENKKK+NNIKLYVRRVFIMDNCE+LIPEYLNF++GVVDSEDLPLNISR
Sbjct: 341 DLFENKKKKNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISR 391
>sp|P34058|HS90B_RAT Heat shock protein HSP 90-beta (HSP 84)
Length = 724
Score = 218 bits (556), Expect = 6e-57
Identities = 100/111 (90%), Positives = 109/111 (98%)
Frame = +3
Query: 213 LNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFCPKRAPF 392
LNKTKPIWTRNPDD++QE+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF P+RAPF
Sbjct: 282 LNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPF 341
Query: 393 DLFENKKKRNNIKLYVRRVFIMDNCEDLIPEYLNFVKGVVDSEDLPLNISR 545
DLFENKKK+NNIKLYVRRVFIMD+C+DLIPEYLNF++GVVDSEDLPLNISR
Sbjct: 342 DLFENKKKKNNIKLYVRRVFIMDSCDDLIPEYLNFIRGVVDSEDLPLNISR 392
>sp|Q04619|HS90B_CHICK Heat shock cognate protein HSP 90-beta
Length = 725
Score = 217 bits (552), Expect = 2e-56
Identities = 99/111 (89%), Positives = 109/111 (98%)
Frame = +3
Query: 213 LNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFCPKRAPF 392
LNKTKPIWTRNPDD++QE+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF P+RAPF
Sbjct: 283 LNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPF 342
Query: 393 DLFENKKKRNNIKLYVRRVFIMDNCEDLIPEYLNFVKGVVDSEDLPLNISR 545
DLFENKKK+NNIKLYVRRVFIMD+C++LIPEYLNF++GVVDSEDLPLNISR
Sbjct: 343 DLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISR 393
>sp|Q9GKX8|HS90B_HORSE Heat shock protein HSP 90-beta (HSP 84)
Length = 724
Score = 217 bits (552), Expect = 2e-56
Identities = 99/111 (89%), Positives = 109/111 (98%)
Frame = +3
Query: 213 LNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFCPKRAPF 392
LNKTKPIWTRNPDD++QE+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF P+RAPF
Sbjct: 282 LNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPF 341
Query: 393 DLFENKKKRNNIKLYVRRVFIMDNCEDLIPEYLNFVKGVVDSEDLPLNISR 545
DLFENKKK+NNIKLYVRRVFIMD+C++LIPEYLNF++GVVDSEDLPLNISR
Sbjct: 342 DLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISR 392
>sp|P07900|HS90A_HUMAN Heat shock protein HSP 90-alpha (HSP 86)
Length = 732
Score = 217 bits (552), Expect = 2e-56
Identities = 99/111 (89%), Positives = 108/111 (97%)
Frame = +3
Query: 213 LNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFCPKRAPF 392
LNKTKPIWTRNPDD++ E+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF P+RAPF
Sbjct: 290 LNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPF 349
Query: 393 DLFENKKKRNNIKLYVRRVFIMDNCEDLIPEYLNFVKGVVDSEDLPLNISR 545
DLFEN+KK+NNIKLYVRRVFIMDNCE+LIPEYLNF++GVVDSEDLPLNISR
Sbjct: 350 DLFENRKKKNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISR 400
>sp|P08238|HS90B_HUMAN Heat shock protein HSP 90-beta (HSP 84) (HSP 90)
Length = 724
Score = 217 bits (552), Expect = 2e-56
Identities = 99/111 (89%), Positives = 109/111 (98%)
Frame = +3
Query: 213 LNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFCPKRAPF 392
LNKTKPIWTRNPDD++QE+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF P+RAPF
Sbjct: 282 LNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPF 341
Query: 393 DLFENKKKRNNIKLYVRRVFIMDNCEDLIPEYLNFVKGVVDSEDLPLNISR 545
DLFENKKK+NNIKLYVRRVFIMD+C++LIPEYLNF++GVVDSEDLPLNISR
Sbjct: 342 DLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISR 392
>sp|O02705|HS90A_PIG Heat shock protein HSP 90-alpha (HSP 86)
Length = 733
Score = 217 bits (552), Expect = 2e-56
Identities = 99/111 (89%), Positives = 108/111 (97%)
Frame = +3
Query: 213 LNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFCPKRAPF 392
LNKTKPIWTRNPDD++ E+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF P+RAPF
Sbjct: 291 LNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPF 350
Query: 393 DLFENKKKRNNIKLYVRRVFIMDNCEDLIPEYLNFVKGVVDSEDLPLNISR 545
DLFEN+KK+NNIKLYVRRVFIMDNCE+LIPEYLNF++GVVDSEDLPLNISR
Sbjct: 351 DLFENRKKKNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISR 401
>sp|Q9GKX7|HS90A_HORSE Heat shock protein HSP 90-alpha (HSP 86)
Length = 719
Score = 217 bits (552), Expect = 2e-56
Identities = 99/111 (89%), Positives = 108/111 (97%)
Frame = +3
Query: 213 LNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFCPKRAPF 392
LNKTKPIWTRNPDD++ E+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF P+RAPF
Sbjct: 280 LNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPF 339
Query: 393 DLFENKKKRNNIKLYVRRVFIMDNCEDLIPEYLNFVKGVVDSEDLPLNISR 545
DLFEN+KK+NNIKLYVRRVFIMDNCE+LIPEYLNF++GVVDSEDLPLNISR
Sbjct: 340 DLFENRKKKNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISR 390
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,175,779
Number of Sequences: 369166
Number of extensions: 573105
Number of successful extensions: 1760
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1679
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 3783975580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)